RNA–Protein interactions for RNA: ENST00000581108.5

CSNK1D-216, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-216ENST00000581108 GPR15P49685 360 aa22.86■■□□□ 1.25
CSNK1D-216ENST00000581108 MYL7Q01449 175 aa22.86■■□□□ 1.25
CSNK1D-216ENST00000581108 MYO1EQ12965 1108 aa22.86■■□□□ 1.25
CSNK1D-216ENST00000581108 FZD5Q13467 585 aa22.86■■□□□ 1.25
CSNK1D-216ENST00000581108 NFE2Q16621 373 aaPredicted RBP22.86■■□□□ 1.25
CSNK1D-216ENST00000581108 INTS6LQ5JSJ4 861 aaKnown RBP22.86■■□□□ 1.25
CSNK1D-216ENST00000581108 YAF2Q8IY57 180 aa22.86■■□□□ 1.25
CSNK1D-216ENST00000581108 CEP57L1Q8IYX8 460 aa22.86■■□□□ 1.25
CSNK1D-216ENST00000581108 ADGRF2Q8IZF7 708 aa22.86■■□□□ 1.25
CSNK1D-216ENST00000581108 CLDN23Q96B33 292 aa22.86■■□□□ 1.25
CSNK1D-216ENST00000581108 LRRC3BQ96PB8 259 aa22.86■■□□□ 1.25
CSNK1D-216ENST00000581108 PKMYT1Q99640 499 aa22.86■■□□□ 1.25
CSNK1D-216ENST00000581108 MRPS17Q9Y2R5 130 aaKnown RBP22.86■■□□□ 1.25
CSNK1D-216ENST00000581108 R4GN57 208 aa22.86■■□□□ 1.25
CSNK1D-216ENST00000581108 ZNF638Q14966 1978 aaKnown RBP22.86■■□□□ 1.25
CSNK1D-216ENST00000581108 ARNTLO00327 626 aa22.85■■□□□ 1.25
CSNK1D-216ENST00000581108 GABRDO14764 452 aa22.85■■□□□ 1.25
CSNK1D-216ENST00000581108 SLFN14P0C7P3 912 aa22.85■■□□□ 1.25
CSNK1D-216ENST00000581108 HMGA1P17096 107 aaKnown RBP22.85■■□□□ 1.25
CSNK1D-216ENST00000581108 CDC25CP30307 473 aa22.85■■□□□ 1.25
CSNK1D-216ENST00000581108 CCDC142Q17RM4 750 aa22.85■■□□□ 1.25
CSNK1D-216ENST00000581108 SDHAF4Q5VUM1 108 aa22.85■■□□□ 1.25
CSNK1D-216ENST00000581108 WDR49Q8IV35 697 aa22.85■■□□□ 1.25
CSNK1D-216ENST00000581108 STKLD1Q8NE28 680 aa22.85■■□□□ 1.25
CSNK1D-216ENST00000581108 TASP1Q9H6P5 420 aa22.85■■□□□ 1.25
CSNK1D-216ENST00000581108 NDRG2Q9UN36 371 aaKnown RBP22.85■■□□□ 1.25
CSNK1D-216ENST00000581108 PIAS3Q9Y6X2 628 aa22.85■■□□□ 1.25
CSNK1D-216ENST00000581108 OBSL1O75147 1896 aa22.84■■□□□ 1.25
CSNK1D-216ENST00000581108 A0A1B0GVL5 298 aa22.84■■□□□ 1.25
CSNK1D-216ENST00000581108 MAN2B1O00754 1011 aa22.84■■□□□ 1.25
CSNK1D-216ENST00000581108 DPYSL4O14531 572 aa22.84■■□□□ 1.25
CSNK1D-216ENST00000581108 NCAM2O15394 837 aa22.84■■□□□ 1.25
CSNK1D-216ENST00000581108 ACTN4O43707 911 aaKnown RBP22.84■■□□□ 1.25
CSNK1D-216ENST00000581108 CST3P01034 146 aaPredicted RBP22.84■■□□□ 1.25
CSNK1D-216ENST00000581108 DLATP10515 647 aaKnown RBP22.84■■□□□ 1.25
CSNK1D-216ENST00000581108 TNNI1P19237 187 aa22.84■■□□□ 1.25
CSNK1D-216ENST00000581108 CYP2F1P24903 491 aa22.84■■□□□ 1.25
CSNK1D-216ENST00000581108 LHX1P48742 406 aa22.84■■□□□ 1.25
CSNK1D-216ENST00000581108 SNRPFP62306 86 aaKnown RBP22.84■■□□□ 1.25
CSNK1D-216ENST00000581108 FCHO2Q0JRZ9 810 aa22.84■■□□□ 1.25
CSNK1D-216ENST00000581108 DDR2Q16832 855 aa22.84■■□□□ 1.25
CSNK1D-216ENST00000581108 BMT2Q1RMZ1 405 aa22.84■■□□□ 1.25
CSNK1D-216ENST00000581108 DPH6Q7L8W6 267 aa22.84■■□□□ 1.25
CSNK1D-216ENST00000581108 HS2ST1Q7LGA3 356 aa22.84■■□□□ 1.25
CSNK1D-216ENST00000581108 TRAPPC11Q7Z392 1133 aa22.84■■□□□ 1.25
CSNK1D-216ENST00000581108 TMEM150AQ86TG1 271 aa22.84■■□□□ 1.25
CSNK1D-216ENST00000581108 ZNF687Q8N1G0 1237 aa22.84■■□□□ 1.25
CSNK1D-216ENST00000581108 XXYLT1Q8NBI6 393 aa22.84■■□□□ 1.25
CSNK1D-216ENST00000581108 SPATA18Q8TC71 538 aa22.84■■□□□ 1.25
CSNK1D-216ENST00000581108 LEO1Q8WVC0 666 aaPredicted RBP22.84■■□□□ 1.25
CSNK1D-216ENST00000581108 CCDC127Q96BQ5 260 aa22.84■■□□□ 1.25
CSNK1D-216ENST00000581108 PAGE5Q96GU1 130 aa22.84■■□□□ 1.25
CSNK1D-216ENST00000581108 GCNAQ96QF7 691 aa22.84■■□□□ 1.25
CSNK1D-216ENST00000581108 SLC46A2Q9BY10 475 aa22.84■■□□□ 1.25
CSNK1D-216ENST00000581108 MYBPHLA2RUH7 354 aa22.83■■□□□ 1.25
CSNK1D-216ENST00000581108 CHADO15335 359 aa22.83■■□□□ 1.25
CSNK1D-216ENST00000581108 LAMTOR5O43504 91 aa22.83■■□□□ 1.25
CSNK1D-216ENST00000581108 KLRC4O43908 158 aa22.83■■□□□ 1.25
CSNK1D-216ENST00000581108 PRAMEF12O95522 483 aa22.83■■□□□ 1.25
CSNK1D-216ENST00000581108 F11P03951 625 aa22.83■■□□□ 1.25
CSNK1D-216ENST00000581108 LMO2P25791 158 aa22.83■■□□□ 1.25
CSNK1D-216ENST00000581108 MAGEA9P43362 315 aa22.83■■□□□ 1.25
CSNK1D-216ENST00000581108 CYP24A1Q07973 514 aa22.83■■□□□ 1.25
CSNK1D-216ENST00000581108 PSMD6Q15008 389 aa22.83■■□□□ 1.25
CSNK1D-216ENST00000581108 KNOP1Q1ED39 458 aaKnown RBP22.83■■□□□ 1.25
CSNK1D-216ENST00000581108 LIMS2Q7Z4I7 341 aa22.83■■□□□ 1.25
CSNK1D-216ENST00000581108 KBTBD7Q8WVZ9 684 aa22.83■■□□□ 1.25
CSNK1D-216ENST00000581108 FAM3CQ92520 227 aa22.83■■□□□ 1.25
CSNK1D-216ENST00000581108 FNBP1Q96RU3 617 aa22.83■■□□□ 1.25
CSNK1D-216ENST00000581108 SMG9Q9H0W8 520 aaKnown RBP22.83■■□□□ 1.25
CSNK1D-216ENST00000581108 MAGED2Q9UNF1 606 aaPredicted RBP22.83■■□□□ 1.25
CSNK1D-216ENST00000581108 KIF26AQ9ULI4 1882 aaPredicted RBP22.83■■□□□ 1.24
CSNK1D-216ENST00000581108 ATP2C2O75185 946 aa22.82■■□□□ 1.24
CSNK1D-216ENST00000581108 PFKFB1P16118 471 aa22.82■■□□□ 1.24
CSNK1D-216ENST00000581108 CMA1P23946 247 aa22.82■■□□□ 1.24
CSNK1D-216ENST00000581108 PCSK1P29120 753 aa22.82■■□□□ 1.24
CSNK1D-216ENST00000581108 WEE1P30291 646 aa22.82■■□□□ 1.24
CSNK1D-216ENST00000581108 RPS9P46781 194 aaKnown RBP22.82■■□□□ 1.24
CSNK1D-216ENST00000581108 NLRP12P59046 1061 aa22.82■■□□□ 1.24
CSNK1D-216ENST00000581108 STK4Q13043 487 aa22.82■■□□□ 1.24
CSNK1D-216ENST00000581108 CSGALNACT1Q8TDX6 532 aa22.82■■□□□ 1.24
CSNK1D-216ENST00000581108 ZFYVE19Q96K21 471 aa22.82■■□□□ 1.24
CSNK1D-216ENST00000581108 SPATA32Q96LK8 384 aa22.82■■□□□ 1.24
CSNK1D-216ENST00000581108 CGRRF1Q99675 332 aa22.82■■□□□ 1.24
CSNK1D-216ENST00000581108 ABCB6Q9NP58 842 aa22.82■■□□□ 1.24
CSNK1D-216ENST00000581108 CSH1P0DML2 217 aa22.81■■□□□ 1.24
CSNK1D-216ENST00000581108 CSH2P0DML3 217 aa22.81■■□□□ 1.24
CSNK1D-216ENST00000581108 CCNE1P24864 410 aa22.81■■□□□ 1.24
CSNK1D-216ENST00000581108 RPL10AP62906 217 aaKnown RBP22.81■■□□□ 1.24
CSNK1D-216ENST00000581108 CSTF1Q05048 431 aaKnown RBP22.81■■□□□ 1.24
CSNK1D-216ENST00000581108 FAM171BQ6P995 826 aa22.81■■□□□ 1.24
CSNK1D-216ENST00000581108 SPATA2LQ8IUW3 424 aaPredicted RBP22.81■■□□□ 1.24
CSNK1D-216ENST00000581108 C12orf56Q8IXR9 622 aa22.81■■□□□ 1.24
CSNK1D-216ENST00000581108 TTC8Q8TAM2 541 aa22.81■■□□□ 1.24
CSNK1D-216ENST00000581108 ZNF516Q92618 1163 aa22.81■■□□□ 1.24
CSNK1D-216ENST00000581108 MMS19Q96T76 1030 aa22.81■■□□□ 1.24
CSNK1D-216ENST00000581108 GZF1Q9H116 711 aaPredicted RBP22.81■■□□□ 1.24
CSNK1D-216ENST00000581108 OBP2AQ9NY56 170 aa22.81■■□□□ 1.24
CSNK1D-216ENST00000581108 CGNQ9P2M7 1197 aaKnown RBP22.81■■□□□ 1.24
CSNK1D-216ENST00000581108 FBXO4Q9UKT5 387 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms