RNA–Protein interactions for RNA: ENST00000580784.5

CSNK1D-215, Transcript of casein kinase 1 delta, humanhuman

TSL 1 (best)

Gene CSNK1D, Length 1,081 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-215ENST00000580784 GPR15P49685 360 aa22.86■■□□□ 1.25
CSNK1D-215ENST00000580784 MYL7Q01449 175 aa22.86■■□□□ 1.25
CSNK1D-215ENST00000580784 MYO1EQ12965 1108 aa22.86■■□□□ 1.25
CSNK1D-215ENST00000580784 FZD5Q13467 585 aa22.86■■□□□ 1.25
CSNK1D-215ENST00000580784 NFE2Q16621 373 aaPredicted RBP22.86■■□□□ 1.25
CSNK1D-215ENST00000580784 INTS6LQ5JSJ4 861 aaKnown RBP22.86■■□□□ 1.25
CSNK1D-215ENST00000580784 YAF2Q8IY57 180 aa22.86■■□□□ 1.25
CSNK1D-215ENST00000580784 CEP57L1Q8IYX8 460 aa22.86■■□□□ 1.25
CSNK1D-215ENST00000580784 ADGRF2Q8IZF7 708 aa22.86■■□□□ 1.25
CSNK1D-215ENST00000580784 CLDN23Q96B33 292 aa22.86■■□□□ 1.25
CSNK1D-215ENST00000580784 LRRC3BQ96PB8 259 aa22.86■■□□□ 1.25
CSNK1D-215ENST00000580784 PKMYT1Q99640 499 aa22.86■■□□□ 1.25
CSNK1D-215ENST00000580784 MRPS17Q9Y2R5 130 aaKnown RBP22.86■■□□□ 1.25
CSNK1D-215ENST00000580784 R4GN57 208 aa22.86■■□□□ 1.25
CSNK1D-215ENST00000580784 ZNF638Q14966 1978 aaKnown RBP22.86■■□□□ 1.25
CSNK1D-215ENST00000580784 ARNTLO00327 626 aa22.85■■□□□ 1.25
CSNK1D-215ENST00000580784 GABRDO14764 452 aa22.85■■□□□ 1.25
CSNK1D-215ENST00000580784 SLFN14P0C7P3 912 aa22.85■■□□□ 1.25
CSNK1D-215ENST00000580784 HMGA1P17096 107 aaKnown RBP22.85■■□□□ 1.25
CSNK1D-215ENST00000580784 CDC25CP30307 473 aa22.85■■□□□ 1.25
CSNK1D-215ENST00000580784 CCDC142Q17RM4 750 aa22.85■■□□□ 1.25
CSNK1D-215ENST00000580784 SDHAF4Q5VUM1 108 aa22.85■■□□□ 1.25
CSNK1D-215ENST00000580784 WDR49Q8IV35 697 aa22.85■■□□□ 1.25
CSNK1D-215ENST00000580784 STKLD1Q8NE28 680 aa22.85■■□□□ 1.25
CSNK1D-215ENST00000580784 TASP1Q9H6P5 420 aa22.85■■□□□ 1.25
CSNK1D-215ENST00000580784 NDRG2Q9UN36 371 aaKnown RBP22.85■■□□□ 1.25
CSNK1D-215ENST00000580784 PIAS3Q9Y6X2 628 aa22.85■■□□□ 1.25
CSNK1D-215ENST00000580784 OBSL1O75147 1896 aa22.84■■□□□ 1.25
CSNK1D-215ENST00000580784 A0A1B0GVL5 298 aa22.84■■□□□ 1.25
CSNK1D-215ENST00000580784 MAN2B1O00754 1011 aa22.84■■□□□ 1.25
CSNK1D-215ENST00000580784 DPYSL4O14531 572 aa22.84■■□□□ 1.25
CSNK1D-215ENST00000580784 NCAM2O15394 837 aa22.84■■□□□ 1.25
CSNK1D-215ENST00000580784 ACTN4O43707 911 aaKnown RBP22.84■■□□□ 1.25
CSNK1D-215ENST00000580784 CST3P01034 146 aaPredicted RBP22.84■■□□□ 1.25
CSNK1D-215ENST00000580784 DLATP10515 647 aaKnown RBP22.84■■□□□ 1.25
CSNK1D-215ENST00000580784 TNNI1P19237 187 aa22.84■■□□□ 1.25
CSNK1D-215ENST00000580784 CYP2F1P24903 491 aa22.84■■□□□ 1.25
CSNK1D-215ENST00000580784 LHX1P48742 406 aa22.84■■□□□ 1.25
CSNK1D-215ENST00000580784 SNRPFP62306 86 aaKnown RBP22.84■■□□□ 1.25
CSNK1D-215ENST00000580784 FCHO2Q0JRZ9 810 aa22.84■■□□□ 1.25
CSNK1D-215ENST00000580784 DDR2Q16832 855 aa22.84■■□□□ 1.25
CSNK1D-215ENST00000580784 BMT2Q1RMZ1 405 aa22.84■■□□□ 1.25
CSNK1D-215ENST00000580784 DPH6Q7L8W6 267 aa22.84■■□□□ 1.25
CSNK1D-215ENST00000580784 HS2ST1Q7LGA3 356 aa22.84■■□□□ 1.25
CSNK1D-215ENST00000580784 TRAPPC11Q7Z392 1133 aa22.84■■□□□ 1.25
CSNK1D-215ENST00000580784 TMEM150AQ86TG1 271 aa22.84■■□□□ 1.25
CSNK1D-215ENST00000580784 ZNF687Q8N1G0 1237 aa22.84■■□□□ 1.25
CSNK1D-215ENST00000580784 XXYLT1Q8NBI6 393 aa22.84■■□□□ 1.25
CSNK1D-215ENST00000580784 SPATA18Q8TC71 538 aa22.84■■□□□ 1.25
CSNK1D-215ENST00000580784 LEO1Q8WVC0 666 aaPredicted RBP22.84■■□□□ 1.25
CSNK1D-215ENST00000580784 CCDC127Q96BQ5 260 aa22.84■■□□□ 1.25
CSNK1D-215ENST00000580784 PAGE5Q96GU1 130 aa22.84■■□□□ 1.25
CSNK1D-215ENST00000580784 GCNAQ96QF7 691 aa22.84■■□□□ 1.25
CSNK1D-215ENST00000580784 SLC46A2Q9BY10 475 aa22.84■■□□□ 1.25
CSNK1D-215ENST00000580784 MYBPHLA2RUH7 354 aa22.83■■□□□ 1.25
CSNK1D-215ENST00000580784 CHADO15335 359 aa22.83■■□□□ 1.25
CSNK1D-215ENST00000580784 LAMTOR5O43504 91 aa22.83■■□□□ 1.25
CSNK1D-215ENST00000580784 KLRC4O43908 158 aa22.83■■□□□ 1.25
CSNK1D-215ENST00000580784 PRAMEF12O95522 483 aa22.83■■□□□ 1.25
CSNK1D-215ENST00000580784 F11P03951 625 aa22.83■■□□□ 1.25
CSNK1D-215ENST00000580784 LMO2P25791 158 aa22.83■■□□□ 1.25
CSNK1D-215ENST00000580784 MAGEA9P43362 315 aa22.83■■□□□ 1.25
CSNK1D-215ENST00000580784 CYP24A1Q07973 514 aa22.83■■□□□ 1.25
CSNK1D-215ENST00000580784 PSMD6Q15008 389 aa22.83■■□□□ 1.25
CSNK1D-215ENST00000580784 KNOP1Q1ED39 458 aaKnown RBP22.83■■□□□ 1.25
CSNK1D-215ENST00000580784 LIMS2Q7Z4I7 341 aa22.83■■□□□ 1.25
CSNK1D-215ENST00000580784 KBTBD7Q8WVZ9 684 aa22.83■■□□□ 1.25
CSNK1D-215ENST00000580784 FAM3CQ92520 227 aa22.83■■□□□ 1.25
CSNK1D-215ENST00000580784 FNBP1Q96RU3 617 aa22.83■■□□□ 1.25
CSNK1D-215ENST00000580784 SMG9Q9H0W8 520 aaKnown RBP22.83■■□□□ 1.25
CSNK1D-215ENST00000580784 MAGED2Q9UNF1 606 aaPredicted RBP22.83■■□□□ 1.25
CSNK1D-215ENST00000580784 KIF26AQ9ULI4 1882 aaPredicted RBP22.83■■□□□ 1.24
CSNK1D-215ENST00000580784 ATP2C2O75185 946 aa22.82■■□□□ 1.24
CSNK1D-215ENST00000580784 PFKFB1P16118 471 aa22.82■■□□□ 1.24
CSNK1D-215ENST00000580784 CMA1P23946 247 aa22.82■■□□□ 1.24
CSNK1D-215ENST00000580784 PCSK1P29120 753 aa22.82■■□□□ 1.24
CSNK1D-215ENST00000580784 WEE1P30291 646 aa22.82■■□□□ 1.24
CSNK1D-215ENST00000580784 RPS9P46781 194 aaKnown RBP22.82■■□□□ 1.24
CSNK1D-215ENST00000580784 NLRP12P59046 1061 aa22.82■■□□□ 1.24
CSNK1D-215ENST00000580784 STK4Q13043 487 aa22.82■■□□□ 1.24
CSNK1D-215ENST00000580784 CSGALNACT1Q8TDX6 532 aa22.82■■□□□ 1.24
CSNK1D-215ENST00000580784 ZFYVE19Q96K21 471 aa22.82■■□□□ 1.24
CSNK1D-215ENST00000580784 SPATA32Q96LK8 384 aa22.82■■□□□ 1.24
CSNK1D-215ENST00000580784 CGRRF1Q99675 332 aa22.82■■□□□ 1.24
CSNK1D-215ENST00000580784 ABCB6Q9NP58 842 aa22.82■■□□□ 1.24
CSNK1D-215ENST00000580784 CSH1P0DML2 217 aa22.81■■□□□ 1.24
CSNK1D-215ENST00000580784 CSH2P0DML3 217 aa22.81■■□□□ 1.24
CSNK1D-215ENST00000580784 CCNE1P24864 410 aa22.81■■□□□ 1.24
CSNK1D-215ENST00000580784 RPL10AP62906 217 aaKnown RBP22.81■■□□□ 1.24
CSNK1D-215ENST00000580784 CSTF1Q05048 431 aaKnown RBP22.81■■□□□ 1.24
CSNK1D-215ENST00000580784 FAM171BQ6P995 826 aa22.81■■□□□ 1.24
CSNK1D-215ENST00000580784 SPATA2LQ8IUW3 424 aaPredicted RBP22.81■■□□□ 1.24
CSNK1D-215ENST00000580784 C12orf56Q8IXR9 622 aa22.81■■□□□ 1.24
CSNK1D-215ENST00000580784 TTC8Q8TAM2 541 aa22.81■■□□□ 1.24
CSNK1D-215ENST00000580784 ZNF516Q92618 1163 aa22.81■■□□□ 1.24
CSNK1D-215ENST00000580784 MMS19Q96T76 1030 aa22.81■■□□□ 1.24
CSNK1D-215ENST00000580784 GZF1Q9H116 711 aaPredicted RBP22.81■■□□□ 1.24
CSNK1D-215ENST00000580784 OBP2AQ9NY56 170 aa22.81■■□□□ 1.24
CSNK1D-215ENST00000580784 CGNQ9P2M7 1197 aaKnown RBP22.81■■□□□ 1.24
CSNK1D-215ENST00000580784 FBXO4Q9UKT5 387 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms