RNA–Protein interactions for RNA: ENST00000579814.1

LIMD2-208, Transcript of LIM domain containing 2, humanhuman

TSL 2

Gene LIMD2, Length 709 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-208ENST00000579814 GABRR2P28476 465 aa28.06■■■□□ 2.08
LIMD2-208ENST00000579814 GNL1P36915 607 aaPredicted RBP28.06■■■□□ 2.08
LIMD2-208ENST00000579814 RPL10AP62906 217 aaKnown RBP28.06■■■□□ 2.08
LIMD2-208ENST00000579814 PFKPQ01813 784 aa28.06■■■□□ 2.08
LIMD2-208ENST00000579814 ADAM9Q13443 819 aa28.06■■■□□ 2.08
LIMD2-208ENST00000579814 NCOA4Q13772 614 aa28.06■■■□□ 2.08
LIMD2-208ENST00000579814 MAPRE1Q15691 268 aaKnown RBP28.06■■■□□ 2.08
LIMD2-208ENST00000579814 IER5LQ5T953 404 aa28.06■■■□□ 2.08
LIMD2-208ENST00000579814 SMARCE1Q969G3 411 aa28.06■■■□□ 2.08
LIMD2-208ENST00000579814 PKMYT1Q99640 499 aa28.06■■■□□ 2.08
LIMD2-208ENST00000579814 SYT15Q9BQS2 421 aa28.06■■■□□ 2.08
LIMD2-208ENST00000579814 GTPBP4Q9BZE4 634 aaKnown RBP28.06■■■□□ 2.08
LIMD2-208ENST00000579814 ZNF334Q9HCZ1 680 aaPredicted RBP28.06■■■□□ 2.08
LIMD2-208ENST00000579814 NXF1Q9UBU9 619 aaKnown RBP28.06■■■□□ 2.08
LIMD2-208ENST00000579814 MYBPHLA2RUH7 354 aa28.05■■■□□ 2.08
LIMD2-208ENST00000579814 HCRTO43612 131 aa28.05■■■□□ 2.08
LIMD2-208ENST00000579814 PDGFRBP09619 1106 aa28.05■■■□□ 2.08
LIMD2-208ENST00000579814 RFX1P22670 979 aa28.05■■■□□ 2.08
LIMD2-208ENST00000579814 VAMP7P51809 220 aa28.05■■■□□ 2.08
LIMD2-208ENST00000579814 DLG4P78352 724 aa28.05■■■□□ 2.08
LIMD2-208ENST00000579814 ZNF658Q5TYW1 1059 aaPredicted RBP28.05■■■□□ 2.08
LIMD2-208ENST00000579814 FAM171BQ6P995 826 aa28.05■■■□□ 2.08
LIMD2-208ENST00000579814 C4orf50Q6ZRC1 276 aa28.05■■■□□ 2.08
LIMD2-208ENST00000579814 INTS8Q75QN2 995 aaKnown RBP28.05■■■□□ 2.08
LIMD2-208ENST00000579814 ELOA2Q8IYF1 753 aaPredicted RBP28.05■■■□□ 2.08
LIMD2-208ENST00000579814 SMYD4Q8IYR2 804 aaPredicted RBP28.05■■■□□ 2.08
LIMD2-208ENST00000579814 OR6B3Q8NGW1 331 aa28.05■■■□□ 2.08
LIMD2-208ENST00000579814 ZSCAN18Q8TBC5 510 aaPredicted RBP28.05■■■□□ 2.08
LIMD2-208ENST00000579814 FAM122AQ96E09 287 aa28.05■■■□□ 2.08
LIMD2-208ENST00000579814 FUBP3Q96I24 572 aaKnown RBP eCLIP28.05■■■□□ 2.08
LIMD2-208ENST00000579814 GCNAQ96QF7 691 aa28.05■■■□□ 2.08
LIMD2-208ENST00000579814 MRPL45Q9BRJ2 306 aaKnown RBP28.05■■■□□ 2.08
LIMD2-208ENST00000579814 PLA2G2FQ9BZM2 168 aa28.05■■■□□ 2.08
LIMD2-208ENST00000579814 XYLT2Q9H1B5 865 aa28.05■■■□□ 2.08
LIMD2-208ENST00000579814 ARHGEF3Q9NR81 526 aa28.05■■■□□ 2.08
LIMD2-208ENST00000579814 PCDHA5Q9Y5H7 936 aa28.05■■■□□ 2.08
LIMD2-208ENST00000579814 KRBA1A5PL33 1030 aa28.04■■■□□ 2.08
LIMD2-208ENST00000579814 KINO60870 393 aaKnown RBP28.04■■■□□ 2.08
LIMD2-208ENST00000579814 AKAP3O75969 853 aa28.04■■■□□ 2.08
LIMD2-208ENST00000579814 KRT13P13646 458 aa28.04■■■□□ 2.08
LIMD2-208ENST00000579814 NPR3P17342 541 aa28.04■■■□□ 2.08
LIMD2-208ENST00000579814 CYP2F1P24903 491 aa28.04■■■□□ 2.08
LIMD2-208ENST00000579814 CDC25CP30307 473 aa28.04■■■□□ 2.08
LIMD2-208ENST00000579814 PSMC2P35998 433 aaKnown RBP28.04■■■□□ 2.08
LIMD2-208ENST00000579814 NUBP1P53384 320 aa28.04■■■□□ 2.08
LIMD2-208ENST00000579814 ZNF699Q32M78 642 aa28.04■■■□□ 2.08
LIMD2-208ENST00000579814 CFAP221Q4G0U5 840 aa28.04■■■□□ 2.08
LIMD2-208ENST00000579814 ARHGAP15Q53QZ3 475 aa28.04■■■□□ 2.08
LIMD2-208ENST00000579814 GAREM2Q75VX8 874 aa28.04■■■□□ 2.08
LIMD2-208ENST00000579814 VRTNQ9H8Y1 702 aa28.04■■■□□ 2.08
LIMD2-208ENST00000579814 ZDBF2Q9HCK1 2354 aa28.03■■■□□ 2.08
LIMD2-208ENST00000579814 ATP2C2O75185 946 aa28.03■■■□□ 2.08
LIMD2-208ENST00000579814 CSH1P0DML2 217 aa28.03■■■□□ 2.08
LIMD2-208ENST00000579814 CSH2P0DML3 217 aa28.03■■■□□ 2.08
LIMD2-208ENST00000579814 FCARP24071 287 aa28.03■■■□□ 2.08
LIMD2-208ENST00000579814 PSMC1P62191 440 aaKnown RBP28.03■■■□□ 2.08
LIMD2-208ENST00000579814 SGSM1Q2NKQ1 1148 aa28.03■■■□□ 2.08
LIMD2-208ENST00000579814 EDRF1Q3B7T1 1238 aa28.03■■■□□ 2.08
LIMD2-208ENST00000579814 ZNF667Q5HYK9 610 aa28.03■■■□□ 2.08
LIMD2-208ENST00000579814 FAM186BQ8IYM0 893 aa28.03■■■□□ 2.08
LIMD2-208ENST00000579814 SPATA20Q8TB22 786 aa28.03■■■□□ 2.08
LIMD2-208ENST00000579814 E2F7Q96AV8 911 aa28.03■■■□□ 2.08
LIMD2-208ENST00000579814 SHDQ96IW2 340 aa28.03■■■□□ 2.08
LIMD2-208ENST00000579814 TRPV4Q9HBA0 871 aa28.03■■■□□ 2.08
LIMD2-208ENST00000579814 CHMP5Q9NZZ3 219 aa28.03■■■□□ 2.08
LIMD2-208ENST00000579814 MAGEC2Q9UBF1 373 aaPredicted RBP28.03■■■□□ 2.08
LIMD2-208ENST00000579814 NOTCH4Q99466 2003 aa28.02■■■□□ 2.08
LIMD2-208ENST00000579814 PRCPP42785 496 aa28.02■■■□□ 2.08
LIMD2-208ENST00000579814 DDR2Q16832 855 aa28.02■■■□□ 2.08
LIMD2-208ENST00000579814 ZACNQ401N2 412 aa28.02■■■□□ 2.08
LIMD2-208ENST00000579814 ZCWPW2Q504Y3 356 aa28.02■■■□□ 2.08
LIMD2-208ENST00000579814 SV2AQ7L0J3 742 aa28.02■■■□□ 2.08
LIMD2-208ENST00000579814 TMEM105Q8N8V8 129 aa28.02■■■□□ 2.08
LIMD2-208ENST00000579814 TRMT61BQ9BVS5 477 aaKnown RBP28.02■■■□□ 2.08
LIMD2-208ENST00000579814 CETN3O15182 167 aa28.01■■■□□ 2.07
LIMD2-208ENST00000579814 P4HA1P13674 534 aa28.01■■■□□ 2.07
LIMD2-208ENST00000579814 AOC1P19801 751 aa28.01■■■□□ 2.07
LIMD2-208ENST00000579814 PLA2G5P39877 138 aa28.01■■■□□ 2.07
LIMD2-208ENST00000579814 GPR15P49685 360 aa28.01■■■□□ 2.07
LIMD2-208ENST00000579814 ENPEPQ07075 957 aa28.01■■■□□ 2.07
LIMD2-208ENST00000579814 SLC44A4Q53GD3 710 aa28.01■■■□□ 2.07
LIMD2-208ENST00000579814 COBLL1Q53SF7 1204 aa28.01■■■□□ 2.07
LIMD2-208ENST00000579814 GPR158Q5T848 1215 aa28.01■■■□□ 2.07
LIMD2-208ENST00000579814 CWF19L1Q69YN2 538 aaKnown RBP28.01■■■□□ 2.07
LIMD2-208ENST00000579814 PHLDB3Q6NSJ2 640 aa28.01■■■□□ 2.07
LIMD2-208ENST00000579814 SCN4BQ8IWT1 228 aa28.01■■■□□ 2.07
LIMD2-208ENST00000579814 MYCBPAPQ8TBZ2 947 aa28.01■■■□□ 2.07
LIMD2-208ENST00000579814 ERCC4Q92889 916 aaPredicted RBP28.01■■■□□ 2.07
LIMD2-208ENST00000579814 TSG101Q99816 390 aa28.01■■■□□ 2.07
LIMD2-208ENST00000579814 TBC1D17Q9HA65 648 aa28.01■■■□□ 2.07
LIMD2-208ENST00000579814 IL21Q9HBE4 155 aa28.01■■■□□ 2.07
LIMD2-208ENST00000579814 CRTAC1Q9NQ79 661 aa28.01■■■□□ 2.07
LIMD2-208ENST00000579814 VNN1O95497 513 aa28■■■□□ 2.07
LIMD2-208ENST00000579814 PSMC3P17980 439 aa28■■■□□ 2.07
LIMD2-208ENST00000579814 ANP32AP39687 249 aaKnown RBP28■■■□□ 2.07
LIMD2-208ENST00000579814 VIPR2P41587 438 aa28■■■□□ 2.07
LIMD2-208ENST00000579814 MAGEA11P43364 429 aa28■■■□□ 2.07
LIMD2-208ENST00000579814 CYP27A1Q02318 531 aa28■■■□□ 2.07
LIMD2-208ENST00000579814 CCDC142Q17RM4 750 aa28■■■□□ 2.07
LIMD2-208ENST00000579814 SDHAF4Q5VUM1 108 aa28■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms