RNA–Protein interactions for RNA: ENST00000577943.2

RN7SL560P-201, Transcript of RNA, 7SL, cytoplasmic 560, pseudogene, humanhuman

BASIC

Gene RN7SL560P, Length 264 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL560P-201ENST00000577943 SURF1Q15526 300 aa16.05■□□□□ 0.16
RN7SL560P-201ENST00000577943 FOXD4L6Q3SYB3 417 aaPredicted RBP16.05■□□□□ 0.16
RN7SL560P-201ENST00000577943 INTS6LQ5JSJ4 861 aaKnown RBP16.05■□□□□ 0.16
RN7SL560P-201ENST00000577943 SCARA3Q6AZY7 606 aa16.05■□□□□ 0.16
RN7SL560P-201ENST00000577943 SHC4Q6S5L8 630 aa16.05■□□□□ 0.16
RN7SL560P-201ENST00000577943 FOXD4L3Q6VB84 417 aaPredicted RBP16.05■□□□□ 0.16
RN7SL560P-201ENST00000577943 HSCBQ8IWL3 235 aa16.05■□□□□ 0.16
RN7SL560P-201ENST00000577943 KIAA2013Q8IYS2 634 aa16.05■□□□□ 0.16
RN7SL560P-201ENST00000577943 SUMF1Q8NBK3 374 aa16.05■□□□□ 0.16
RN7SL560P-201ENST00000577943 TTC8Q8TAM2 541 aa16.05■□□□□ 0.16
RN7SL560P-201ENST00000577943 CXorf38Q8TB03 319 aa16.05■□□□□ 0.16
RN7SL560P-201ENST00000577943 ZFYVE19Q96K21 471 aa16.05■□□□□ 0.16
RN7SL560P-201ENST00000577943 LRRC3BQ96PB8 259 aa16.05■□□□□ 0.16
RN7SL560P-201ENST00000577943 IER2Q9BTL4 223 aa16.05■□□□□ 0.16
RN7SL560P-201ENST00000577943 GDAP2Q9NXN4 497 aa16.05■□□□□ 0.16
RN7SL560P-201ENST00000577943 SIX4Q9UIU6 781 aa16.05■□□□□ 0.16
RN7SL560P-201ENST00000577943 MAGED2Q9UNF1 606 aaPredicted RBP16.05■□□□□ 0.16
RN7SL560P-201ENST00000577943 FRYLO94915 3013 aa16.05■□□□□ 0.16
RN7SL560P-201ENST00000577943 MYH10P35580 1976 aa16.04■□□□□ 0.16
RN7SL560P-201ENST00000577943 EIF3DO15371 548 aaKnown RBP eCLIP16.04■□□□□ 0.16
RN7SL560P-201ENST00000577943 TNNC2P02585 160 aa16.04■□□□□ 0.16
RN7SL560P-201ENST00000577943 CSH1P0DML2 217 aa16.04■□□□□ 0.16
RN7SL560P-201ENST00000577943 CSH2P0DML3 217 aa16.04■□□□□ 0.16
RN7SL560P-201ENST00000577943 WEE1P30291 646 aa16.04■□□□□ 0.16
RN7SL560P-201ENST00000577943 ID4P47928 161 aa16.04■□□□□ 0.16
RN7SL560P-201ENST00000577943 LHX1P48742 406 aa16.04■□□□□ 0.16
RN7SL560P-201ENST00000577943 MYO1EQ12965 1108 aa16.04■□□□□ 0.16
RN7SL560P-201ENST00000577943 CBWD2Q8IUF1 395 aa16.04■□□□□ 0.16
RN7SL560P-201ENST00000577943 ADGRF2Q8IZF7 708 aa16.04■□□□□ 0.16
RN7SL560P-201ENST00000577943 DCLK2Q8N568 766 aa16.04■□□□□ 0.16
RN7SL560P-201ENST00000577943 TOP6BLQ8N6T0 577 aa16.04■□□□□ 0.16
RN7SL560P-201ENST00000577943 CELF5Q8N6W0 485 aaKnown RBP16.04■□□□□ 0.16
RN7SL560P-201ENST00000577943 MAB21L3Q8N8X9 362 aa16.04■□□□□ 0.16
RN7SL560P-201ENST00000577943 ZBTB44Q8NCP5 570 aa16.04■□□□□ 0.16
RN7SL560P-201ENST00000577943 STKLD1Q8NE28 680 aa16.04■□□□□ 0.16
RN7SL560P-201ENST00000577943 SPATA18Q8TC71 538 aa16.04■□□□□ 0.16
RN7SL560P-201ENST00000577943 LEO1Q8WVC0 666 aaPredicted RBP16.04■□□□□ 0.16
RN7SL560P-201ENST00000577943 SLC46A2Q9BY10 475 aa16.04■□□□□ 0.16
RN7SL560P-201ENST00000577943 FAM126AQ9BYI3 521 aaPredicted RBP16.04■□□□□ 0.16
RN7SL560P-201ENST00000577943 SMG9Q9H0W8 520 aaKnown RBP16.04■□□□□ 0.16
RN7SL560P-201ENST00000577943 INTS13Q9NVM9 706 aa16.04■□□□□ 0.16
RN7SL560P-201ENST00000577943 THG1LQ9NWX6 298 aaKnown RBP16.04■□□□□ 0.16
RN7SL560P-201ENST00000577943 GTSE1Q9NYZ3 720 aa16.04■□□□□ 0.16
RN7SL560P-201ENST00000577943 HSPBP1Q9NZL4 362 aa16.04■□□□□ 0.16
RN7SL560P-201ENST00000577943 ZMYM5Q9UJ78 669 aa16.04■□□□□ 0.16
RN7SL560P-201ENST00000577943 GTF3C4Q9UKN8 822 aa16.04■□□□□ 0.16
RN7SL560P-201ENST00000577943 DMXL1Q9Y485 3027 aa16.03■□□□□ 0.16
RN7SL560P-201ENST00000577943 WDR87Q6ZQQ6 2873 aa16.03■□□□□ 0.16
RN7SL560P-201ENST00000577943 MYBPHLA2RUH7 354 aa16.03■□□□□ 0.16
RN7SL560P-201ENST00000577943 SPECC1L-ADORA2AF8WAN1 911 aa16.03■□□□□ 0.16
RN7SL560P-201ENST00000577943 POLR2DO15514 142 aaKnown RBP16.03■□□□□ 0.16
RN7SL560P-201ENST00000577943 F11P03951 625 aa16.03■□□□□ 0.16
RN7SL560P-201ENST00000577943 CHRNB1P11230 501 aa16.03■□□□□ 0.16
RN7SL560P-201ENST00000577943 PDIA4P13667 645 aaKnown RBP16.03■□□□□ 0.16
RN7SL560P-201ENST00000577943 HMGA1P17096 107 aaKnown RBP16.03■□□□□ 0.16
RN7SL560P-201ENST00000577943 CYP2F1P24903 491 aa16.03■□□□□ 0.16
RN7SL560P-201ENST00000577943 PCSK1P29120 753 aa16.03■□□□□ 0.16
RN7SL560P-201ENST00000577943 CTHP32929 405 aa16.03■□□□□ 0.16
RN7SL560P-201ENST00000577943 AVPR1AP37288 418 aa16.03■□□□□ 0.16
RN7SL560P-201ENST00000577943 CCR3P51677 355 aa16.03■□□□□ 0.16
RN7SL560P-201ENST00000577943 NRLP54845 237 aa16.03■□□□□ 0.16
RN7SL560P-201ENST00000577943 NLRP12P59046 1061 aa16.03■□□□□ 0.16
RN7SL560P-201ENST00000577943 RPL10AP62906 217 aaKnown RBP16.03■□□□□ 0.16
RN7SL560P-201ENST00000577943 PLCB2Q00722 1185 aa16.03■□□□□ 0.16
RN7SL560P-201ENST00000577943 LRRC32Q14392 662 aa16.03■□□□□ 0.16
RN7SL560P-201ENST00000577943 DDR2Q16832 855 aa16.03■□□□□ 0.16
RN7SL560P-201ENST00000577943 DUOXA2Q1HG44 320 aa16.03■□□□□ 0.16
RN7SL560P-201ENST00000577943 FAM26FQ5R3K3 315 aa16.03■□□□□ 0.16
RN7SL560P-201ENST00000577943 SDHAF4Q5VUM1 108 aa16.03■□□□□ 0.16
RN7SL560P-201ENST00000577943 OSTM1Q86WC4 334 aa16.03■□□□□ 0.16
RN7SL560P-201ENST00000577943 RALGPS2Q86X27 583 aaPredicted RBP16.03■□□□□ 0.16
RN7SL560P-201ENST00000577943 CMTM8Q8IZV2 173 aa16.03■□□□□ 0.16
RN7SL560P-201ENST00000577943 RDH13Q8NBN7 331 aa16.03■□□□□ 0.16
RN7SL560P-201ENST00000577943 OR5B17Q8NGF7 314 aa16.03■□□□□ 0.16
RN7SL560P-201ENST00000577943 NELL1Q92832 810 aa16.03■□□□□ 0.16
RN7SL560P-201ENST00000577943 KIAA1586Q9HCI6 787 aa16.03■□□□□ 0.16
RN7SL560P-201ENST00000577943 ABCB6Q9NP58 842 aa16.03■□□□□ 0.16
RN7SL560P-201ENST00000577943 NCDNQ9UBB6 729 aa16.03■□□□□ 0.16
RN7SL560P-201ENST00000577943 HELZP42694 1942 aaKnown RBP16.03■□□□□ 0.16
RN7SL560P-201ENST00000577943 PTPRJQ12913 1337 aa16.02■□□□□ 0.16
RN7SL560P-201ENST00000577943 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.02■□□□□ 0.16
RN7SL560P-201ENST00000577943 GABRDO14764 452 aa16.02■□□□□ 0.16
RN7SL560P-201ENST00000577943 LILRB5O75023 590 aa16.02■□□□□ 0.16
RN7SL560P-201ENST00000577943 F13A1P00488 732 aa16.02■□□□□ 0.16
RN7SL560P-201ENST00000577943 ZSCAN22P10073 491 aaPredicted RBP16.02■□□□□ 0.16
RN7SL560P-201ENST00000577943 DDX6P26196 483 aaKnown RBP eCLIP16.02■□□□□ 0.16
RN7SL560P-201ENST00000577943 HOXD13P35453 343 aa16.02■□□□□ 0.16
RN7SL560P-201ENST00000577943 TNK2Q07912 1038 aa16.02■□□□□ 0.16
RN7SL560P-201ENST00000577943 SOWAHAQ2M3V2 549 aa16.02■□□□□ 0.16
RN7SL560P-201ENST00000577943 CNNM4Q6P4Q7 775 aa16.02■□□□□ 0.16
RN7SL560P-201ENST00000577943 MAMSTRQ6ZN01 415 aa16.02■□□□□ 0.16
RN7SL560P-201ENST00000577943 EPM2AIP1Q7L775 607 aaPredicted RBP16.02■□□□□ 0.16
RN7SL560P-201ENST00000577943 DPH6Q7L8W6 267 aa16.02■□□□□ 0.16
RN7SL560P-201ENST00000577943 TMEM150AQ86TG1 271 aa16.02■□□□□ 0.16
RN7SL560P-201ENST00000577943 SPATA2LQ8IUW3 424 aaPredicted RBP16.02■□□□□ 0.16
RN7SL560P-201ENST00000577943 NELFCDQ8IXH7 590 aa16.02■□□□□ 0.16
RN7SL560P-201ENST00000577943 ZNF507Q8TCN5 953 aa16.02■□□□□ 0.16
RN7SL560P-201ENST00000577943 MRPS31Q92665 395 aaKnown RBP16.02■□□□□ 0.16
RN7SL560P-201ENST00000577943 HPDLQ96IR7 371 aa16.02■□□□□ 0.16
RN7SL560P-201ENST00000577943 C7orf25Q9BPX7 421 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms