RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 FAM189A1O60320 539 aa10.94□□□□□ -0.66
NPLOC4-220ENST00000576940 CYP11A1P05108 521 aa10.94□□□□□ -0.66
NPLOC4-220ENST00000576940 ADRB2P07550 413 aa10.94□□□□□ -0.66
NPLOC4-220ENST00000576940 CSRP1P21291 193 aaKnown RBP10.94□□□□□ -0.66
NPLOC4-220ENST00000576940 BCKDHBP21953 392 aa10.94□□□□□ -0.66
NPLOC4-220ENST00000576940 GUCY2CP25092 1073 aa10.94□□□□□ -0.66
NPLOC4-220ENST00000576940 KARSQ15046 597 aaKnown RBP10.94□□□□□ -0.66
NPLOC4-220ENST00000576940 FBXO43Q4G163 708 aa10.94□□□□□ -0.66
NPLOC4-220ENST00000576940 PMS2CLQ68D20 193 aa10.94□□□□□ -0.66
NPLOC4-220ENST00000576940 MON1AQ86VX9 555 aa10.94□□□□□ -0.66
NPLOC4-220ENST00000576940 THEM5Q8N1Q8 247 aa10.94□□□□□ -0.66
NPLOC4-220ENST00000576940 CD101Q93033 1021 aa10.94□□□□□ -0.66
NPLOC4-220ENST00000576940 PNMA5Q96PV4 448 aa10.94□□□□□ -0.66
NPLOC4-220ENST00000576940 LINC00597Q9H2U6 94 aa10.94□□□□□ -0.66
NPLOC4-220ENST00000576940 TMLHEQ9NVH6 421 aa10.94□□□□□ -0.66
NPLOC4-220ENST00000576940 DUS2Q9NX74 493 aaKnown RBP10.94□□□□□ -0.66
NPLOC4-220ENST00000576940 ABI2Q9NYB9 513 aaPredicted RBP10.94□□□□□ -0.66
NPLOC4-220ENST00000576940 KCNG1Q9UIX4 513 aa10.94□□□□□ -0.66
NPLOC4-220ENST00000576940 STK24Q9Y6E0 443 aa10.94□□□□□ -0.66
NPLOC4-220ENST00000576940 NUP205Q92621 2012 aa10.94□□□□□ -0.66
NPLOC4-220ENST00000576940 ZNF638Q14966 1978 aaKnown RBP10.94□□□□□ -0.66
NPLOC4-220ENST00000576940 THADAQ6YHU6 1953 aa10.94□□□□□ -0.66
NPLOC4-220ENST00000576940 ANO9A1A5B4 782 aa10.93□□□□□ -0.66
NPLOC4-220ENST00000576940 HYAL3O43820 417 aaPredicted RBP10.93□□□□□ -0.66
NPLOC4-220ENST00000576940 NFICP08651 508 aa10.93□□□□□ -0.66
NPLOC4-220ENST00000576940 DHPSP49366 369 aaPredicted RBP10.93□□□□□ -0.66
NPLOC4-220ENST00000576940 LIG4P49917 911 aa10.93□□□□□ -0.66
NPLOC4-220ENST00000576940 NEK4P51957 841 aa10.93□□□□□ -0.66
NPLOC4-220ENST00000576940 ANAPC15P60006 121 aa10.93□□□□□ -0.66
NPLOC4-220ENST00000576940 GNL2Q13823 731 aaKnown RBP10.93□□□□□ -0.66
NPLOC4-220ENST00000576940 MTF1Q14872 753 aa10.93□□□□□ -0.66
NPLOC4-220ENST00000576940 PDGFRLQ15198 375 aa10.93□□□□□ -0.66
NPLOC4-220ENST00000576940 USP39Q53GS9 565 aaKnown RBP10.93□□□□□ -0.66
NPLOC4-220ENST00000576940 C2orf27AQ580R0 203 aa10.93□□□□□ -0.66
NPLOC4-220ENST00000576940 ERICH6BQ5W0A0 696 aa10.93□□□□□ -0.66
NPLOC4-220ENST00000576940 WSCD1Q658N2 575 aa10.93□□□□□ -0.66
NPLOC4-220ENST00000576940 ANO7Q6IWH7 933 aa10.93□□□□□ -0.66
NPLOC4-220ENST00000576940 TTC30AQ86WT1 665 aa10.93□□□□□ -0.66
NPLOC4-220ENST00000576940 METTL23Q86XA0 190 aa10.93□□□□□ -0.66
NPLOC4-220ENST00000576940 FRMD1Q8N878 549 aa10.93□□□□□ -0.66
NPLOC4-220ENST00000576940 SYT2Q8N9I0 419 aaPredicted RBP10.93□□□□□ -0.66
NPLOC4-220ENST00000576940 TSTD1Q8NFU3 115 aa10.93□□□□□ -0.66
NPLOC4-220ENST00000576940 FBXO18Q8NFZ0 1043 aa10.93□□□□□ -0.66
NPLOC4-220ENST00000576940 SPPL2BQ8TCT7 592 aa10.93□□□□□ -0.66
NPLOC4-220ENST00000576940 OSCP1Q8WVF1 389 aa10.93□□□□□ -0.66
NPLOC4-220ENST00000576940 ZCCHC14Q8WYQ9 949 aaKnown RBP10.93□□□□□ -0.66
NPLOC4-220ENST00000576940 PIGKQ92643 395 aa10.93□□□□□ -0.66
NPLOC4-220ENST00000576940 SLC22A12Q96S37 553 aa10.93□□□□□ -0.66
NPLOC4-220ENST00000576940 PYM1Q9BRP8 204 aaKnown RBP10.93□□□□□ -0.66
NPLOC4-220ENST00000576940 PI4K2AQ9BTU6 479 aa10.93□□□□□ -0.66
NPLOC4-220ENST00000576940 TIPINQ9BVW5 301 aa10.93□□□□□ -0.66
NPLOC4-220ENST00000576940 RAB34Q9BZG1 259 aa10.93□□□□□ -0.66
NPLOC4-220ENST00000576940 ZMYM5Q9UJ78 669 aa10.93□□□□□ -0.66
NPLOC4-220ENST00000576940 LHX6Q9UPM6 363 aa10.93□□□□□ -0.66
NPLOC4-220ENST00000576940 WNT6Q9Y6F9 365 aa10.93□□□□□ -0.66
NPLOC4-220ENST00000576940 DMXL2Q8TDJ6 3036 aa10.93□□□□□ -0.66
NPLOC4-220ENST00000576940 SCN1AP35498 2009 aa10.92□□□□□ -0.66
NPLOC4-220ENST00000576940 ASCC3Q8N3C0 2202 aaKnown RBP10.92□□□□□ -0.66
NPLOC4-220ENST00000576940 DENND4CQ5VZ89 1909 aa10.92□□□□□ -0.66
NPLOC4-220ENST00000576940 TMEM8BA6NDV4 472 aa10.92□□□□□ -0.66
NPLOC4-220ENST00000576940 K7EQS6 105 aa10.92□□□□□ -0.66
NPLOC4-220ENST00000576940 OGTO15294 1046 aa10.92□□□□□ -0.66
NPLOC4-220ENST00000576940 PRPF40AO75400 957 aaKnown RBP10.92□□□□□ -0.66
NPLOC4-220ENST00000576940 DDX6P26196 483 aaKnown RBP eCLIP10.92□□□□□ -0.66
NPLOC4-220ENST00000576940 TRAPPC10P48553 1259 aa10.92□□□□□ -0.66
NPLOC4-220ENST00000576940 SLC12A3P55017 1021 aa10.92□□□□□ -0.66
NPLOC4-220ENST00000576940 NCKAP1LP55160 1127 aa10.92□□□□□ -0.66
NPLOC4-220ENST00000576940 SEC13P55735 322 aa10.92□□□□□ -0.66
NPLOC4-220ENST00000576940 DDR2Q16832 855 aa10.92□□□□□ -0.66
NPLOC4-220ENST00000576940 EML3Q32P44 896 aa10.92□□□□□ -0.66
NPLOC4-220ENST00000576940 ARSHQ5FYA8 562 aa10.92□□□□□ -0.66
NPLOC4-220ENST00000576940 DTHD1Q6ZMT9 781 aa10.92□□□□□ -0.66
NPLOC4-220ENST00000576940 CYP2U1Q7Z449 544 aa10.92□□□□□ -0.66
NPLOC4-220ENST00000576940 CCDC83Q8IWF9 413 aa10.92□□□□□ -0.66
NPLOC4-220ENST00000576940 CPA6Q8N4T0 437 aa10.92□□□□□ -0.66
NPLOC4-220ENST00000576940 CCDC33Q8N5R6 958 aa10.92□□□□□ -0.66
NPLOC4-220ENST00000576940 LRRC15Q8TF66 581 aa10.92□□□□□ -0.66
NPLOC4-220ENST00000576940 C2orf15Q8WU43 125 aaKnown RBP10.92□□□□□ -0.66
NPLOC4-220ENST00000576940 RLN3Q8WXF3 142 aa10.92□□□□□ -0.66
NPLOC4-220ENST00000576940 MRPS31Q92665 395 aaKnown RBP10.92□□□□□ -0.66
NPLOC4-220ENST00000576940 KIF9Q9HAQ2 790 aa10.92□□□□□ -0.66
NPLOC4-220ENST00000576940 TRPC7Q9HCX4 862 aa10.92□□□□□ -0.66
NPLOC4-220ENST00000576940 TMEM74BQ9NUR3 256 aa10.92□□□□□ -0.66
NPLOC4-220ENST00000576940 CPSF3Q9UKF6 684 aaKnown RBP10.92□□□□□ -0.66
NPLOC4-220ENST00000576940 KLK13Q9UKR3 277 aa10.92□□□□□ -0.66
NPLOC4-220ENST00000576940 DSEQ9UL01 958 aa10.92□□□□□ -0.66
NPLOC4-220ENST00000576940 NOL7Q9UMY1 257 aaKnown RBP10.92□□□□□ -0.66
NPLOC4-220ENST00000576940 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.92□□□□□ -0.66
NPLOC4-220ENST00000576940 GON4LQ3T8J9 2241 aa10.92□□□□□ -0.66
NPLOC4-220ENST00000576940 PCNX2A6NKB5 2137 aa10.91□□□□□ -0.66
NPLOC4-220ENST00000576940 SMG1Q96Q15 3661 aaKnown RBP10.91□□□□□ -0.66
NPLOC4-220ENST00000576940 MYH11P35749 1972 aa10.91□□□□□ -0.66
NPLOC4-220ENST00000576940 A0A0B4J269 797 aa10.91□□□□□ -0.66
NPLOC4-220ENST00000576940 SPAARA0A1B0GVQ0 90 aa10.91□□□□□ -0.66
NPLOC4-220ENST00000576940 TAF4O00268 1085 aa10.91□□□□□ -0.66
NPLOC4-220ENST00000576940 HNRNPDLO14979 420 aaKnown RBP10.91□□□□□ -0.66
NPLOC4-220ENST00000576940 TADA3O75528 432 aa10.91□□□□□ -0.66
NPLOC4-220ENST00000576940 PLA2G4BP0C869 781 aa10.91□□□□□ -0.66
NPLOC4-220ENST00000576940 HNRNPLP14866 589 aaKnown RBP eCLIP10.91□□□□□ -0.66
NPLOC4-220ENST00000576940 CYP2F1P24903 491 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms