RNA–Protein interactions for RNA: ENST00000575513.1

CIITA-210, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-210ENST00000575513 TRIM49BA6NDI0 452 aa14.51□□□□□ -0.09
CIITA-210ENST00000575513 BIN1O00499 593 aa14.51□□□□□ -0.09
CIITA-210ENST00000575513 PMM2O15305 246 aa14.51□□□□□ -0.09
CIITA-210ENST00000575513 GNA14O95837 355 aa14.51□□□□□ -0.09
CIITA-210ENST00000575513 HLA-DRAP01903 254 aa14.51□□□□□ -0.09
CIITA-210ENST00000575513 TRIM49P0CI25 452 aa14.51□□□□□ -0.09
CIITA-210ENST00000575513 TRIM49CP0CI26 452 aa14.51□□□□□ -0.09
CIITA-210ENST00000575513 ACAT1P24752 427 aaKnown RBP14.51□□□□□ -0.09
CIITA-210ENST00000575513 MAGEA11P43364 429 aa14.51□□□□□ -0.09
CIITA-210ENST00000575513 RPL10AP62906 217 aaKnown RBP14.51□□□□□ -0.09
CIITA-210ENST00000575513 SIGLEC14Q08ET2 396 aa14.51□□□□□ -0.09
CIITA-210ENST00000575513 PAK1Q13153 545 aa14.51□□□□□ -0.09
CIITA-210ENST00000575513 VEPH1Q14D04 833 aa14.51□□□□□ -0.09
CIITA-210ENST00000575513 SLC5A9Q2M3M2 681 aa14.51□□□□□ -0.09
CIITA-210ENST00000575513 VSTM1Q6UX27 236 aa14.51□□□□□ -0.09
CIITA-210ENST00000575513 TRIM67Q6ZTA4 783 aa14.51□□□□□ -0.09
CIITA-210ENST00000575513 MTSS1LQ765P7 747 aa14.51□□□□□ -0.09
CIITA-210ENST00000575513 SPATA2LQ8IUW3 424 aaPredicted RBP14.51□□□□□ -0.09
CIITA-210ENST00000575513 NPAS3Q8IXF0 933 aa14.51□□□□□ -0.09
CIITA-210ENST00000575513 MLKLQ8NB16 471 aa14.51□□□□□ -0.09
CIITA-210ENST00000575513 CCDC150Q8NCX0 1101 aa14.51□□□□□ -0.09
CIITA-210ENST00000575513 OR6B3Q8NGW1 331 aa14.51□□□□□ -0.09
CIITA-210ENST00000575513 MYCBPAPQ8TBZ2 947 aa14.51□□□□□ -0.09
CIITA-210ENST00000575513 GPT2Q8TD30 523 aa14.51□□□□□ -0.09
CIITA-210ENST00000575513 NELFBQ8WX92 580 aa14.51□□□□□ -0.09
CIITA-210ENST00000575513 EEF2KMTQ96G04 330 aa14.51□□□□□ -0.09
CIITA-210ENST00000575513 SEPT5Q99719 369 aaPredicted RBP14.51□□□□□ -0.09
CIITA-210ENST00000575513 DUSP9Q99956 384 aaKnown RBP14.51□□□□□ -0.09
CIITA-210ENST00000575513 SYT15Q9BQS2 421 aa14.51□□□□□ -0.09
CIITA-210ENST00000575513 MRPL45Q9BRJ2 306 aaKnown RBP14.51□□□□□ -0.09
CIITA-210ENST00000575513 NUP62CLQ9H1M0 184 aa14.51□□□□□ -0.09
CIITA-210ENST00000575513 FAM124BQ9H5Z6 455 aaPredicted RBP14.51□□□□□ -0.09
CIITA-210ENST00000575513 ABI2Q9NYB9 513 aaPredicted RBP14.51□□□□□ -0.09
CIITA-210ENST00000575513 TSC2P49815 1807 aa14.5□□□□□ -0.09
CIITA-210ENST00000575513 PRR33A8MZF0 331 aa14.5□□□□□ -0.09
CIITA-210ENST00000575513 FGFR1OPO95684 399 aaKnown RBP14.5□□□□□ -0.09
CIITA-210ENST00000575513 ASGR2P07307 311 aa14.5□□□□□ -0.09
CIITA-210ENST00000575513 PDGFRBP09619 1106 aa14.5□□□□□ -0.09
CIITA-210ENST00000575513 ATF6P18850 670 aa14.5□□□□□ -0.09
CIITA-210ENST00000575513 PIK3CAP42336 1068 aa14.5□□□□□ -0.09
CIITA-210ENST00000575513 HTR4Q13639 388 aa14.5□□□□□ -0.09
CIITA-210ENST00000575513 KLHL10Q6JEL2 608 aa14.5□□□□□ -0.09
CIITA-210ENST00000575513 BMP8AQ7Z5Y6 402 aa14.5□□□□□ -0.09
CIITA-210ENST00000575513 UNC93AQ86WB7 457 aa14.5□□□□□ -0.09
CIITA-210ENST00000575513 TMC8Q8IU68 726 aa14.5□□□□□ -0.09
CIITA-210ENST00000575513 TTC9BQ8N6N2 239 aa14.5□□□□□ -0.09
CIITA-210ENST00000575513 FBXL13Q8NEE6 735 aa14.5□□□□□ -0.09
CIITA-210ENST00000575513 TAS1R2Q8TE23 839 aa14.5□□□□□ -0.09
CIITA-210ENST00000575513 TNIP3Q96KP6 325 aa14.5□□□□□ -0.09
CIITA-210ENST00000575513 CYP3A43Q9HB55 503 aa14.5□□□□□ -0.09
CIITA-210ENST00000575513 C11orf16Q9NQ32 467 aa14.5□□□□□ -0.09
CIITA-210ENST00000575513 CRTAC1Q9NQ79 661 aa14.5□□□□□ -0.09
CIITA-210ENST00000575513 MAGEC2Q9UBF1 373 aaPredicted RBP14.5□□□□□ -0.09
CIITA-210ENST00000575513 ZMYM5Q9UJ78 669 aa14.5□□□□□ -0.09
CIITA-210ENST00000575513 COQ4Q9Y3A0 265 aa14.5□□□□□ -0.09
CIITA-210ENST00000575513 SOBPA7XYQ1 873 aa14.49□□□□□ -0.09
CIITA-210ENST00000575513 A8MXQ7 604 aa14.49□□□□□ -0.09
CIITA-210ENST00000575513 ATP2C2O75185 946 aa14.49□□□□□ -0.09
CIITA-210ENST00000575513 CSH1P0DML2 217 aa14.49□□□□□ -0.09
CIITA-210ENST00000575513 CSH2P0DML3 217 aa14.49□□□□□ -0.09
CIITA-210ENST00000575513 PTPN1P18031 435 aaKnown RBP14.49□□□□□ -0.09
CIITA-210ENST00000575513 CCR2P41597 374 aa14.49□□□□□ -0.09
CIITA-210ENST00000575513 MXI1P50539 228 aa14.49□□□□□ -0.09
CIITA-210ENST00000575513 MARSP56192 900 aaKnown RBP14.49□□□□□ -0.09
CIITA-210ENST00000575513 CT47A1Q5JQC4 288 aaPredicted RBP14.49□□□□□ -0.09
CIITA-210ENST00000575513 HS6ST3Q8IZP7 471 aa14.49□□□□□ -0.09
CIITA-210ENST00000575513 SLC44A3Q8N4M1 653 aa14.49□□□□□ -0.09
CIITA-210ENST00000575513 TTC39CQ8N584 583 aa14.49□□□□□ -0.09
CIITA-210ENST00000575513 FAM200AQ8TCP9 573 aa14.49□□□□□ -0.09
CIITA-210ENST00000575513 SLC35C1Q96A29 364 aa14.49□□□□□ -0.09
CIITA-210ENST00000575513 TCEAL4Q96EI5 215 aa14.49□□□□□ -0.09
CIITA-210ENST00000575513 PI4K2AQ9BTU6 479 aa14.49□□□□□ -0.09
CIITA-210ENST00000575513 BCO2Q9BYV7 579 aa14.49□□□□□ -0.09
CIITA-210ENST00000575513 RAB20Q9NX57 234 aa14.49□□□□□ -0.09
CIITA-210ENST00000575513 RWDD2AQ9UIY3 292 aa14.49□□□□□ -0.09
CIITA-210ENST00000575513 DUSP12Q9UNI6 340 aa14.49□□□□□ -0.09
CIITA-210ENST00000575513 HCRTO43612 131 aa14.48□□□□□ -0.09
CIITA-210ENST00000575513 MOSPD3O75425 235 aa14.48□□□□□ -0.09
CIITA-210ENST00000575513 ECI2O75521 394 aa14.48□□□□□ -0.09
CIITA-210ENST00000575513 SOAT2O75908 522 aa14.48□□□□□ -0.09
CIITA-210ENST00000575513 MYL4P12829 197 aa14.48□□□□□ -0.09
CIITA-210ENST00000575513 CEBPBP17676 345 aa14.48□□□□□ -0.09
CIITA-210ENST00000575513 TRIM21P19474 475 aaKnown RBP14.48□□□□□ -0.09
CIITA-210ENST00000575513 CYP2F1P24903 491 aa14.48□□□□□ -0.09
CIITA-210ENST00000575513 WEE1P30291 646 aa14.48□□□□□ -0.09
CIITA-210ENST00000575513 CDC25CP30307 473 aa14.48□□□□□ -0.09
CIITA-210ENST00000575513 ASPAP45381 313 aa14.48□□□□□ -0.09
CIITA-210ENST00000575513 CDH8P55286 799 aa14.48□□□□□ -0.09
CIITA-210ENST00000575513 NOP14P78316 857 aaKnown RBP14.48□□□□□ -0.09
CIITA-210ENST00000575513 INCA1Q0VD86 236 aa14.48□□□□□ -0.09
CIITA-210ENST00000575513 TAF12Q16514 161 aa14.48□□□□□ -0.09
CIITA-210ENST00000575513 TCERG1LQ5VWI1 586 aa14.48□□□□□ -0.09
CIITA-210ENST00000575513 CRYBG2Q8N1P7 616 aa14.48□□□□□ -0.09
CIITA-210ENST00000575513 B3GALNT2Q8NCR0 500 aa14.48□□□□□ -0.09
CIITA-210ENST00000575513 E2F7Q96AV8 911 aa14.48□□□□□ -0.09
CIITA-210ENST00000575513 TRMT2BQ96GJ1 504 aaKnown RBP14.48□□□□□ -0.09
CIITA-210ENST00000575513 PCED1BQ96HM7 432 aa14.48□□□□□ -0.09
CIITA-210ENST00000575513 SPATA17Q96L03 361 aa14.48□□□□□ -0.09
CIITA-210ENST00000575513 MYRFLQ96LU7 910 aa14.48□□□□□ -0.09
CIITA-210ENST00000575513 LRFN3Q9BTN0 628 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms