RNA–Protein interactions for RNA: ENST00000574379.2

NCBP3-203, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 2

Gene NCBP3, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-203ENST00000574379 ELAVL2Q12926 359 aaKnown RBP10.77□□□□□ -0.69
NCBP3-203ENST00000574379 TMEM132DQ14C87 1099 aa10.77□□□□□ -0.69
NCBP3-203ENST00000574379 KNOP1Q1ED39 458 aaKnown RBP10.77□□□□□ -0.69
NCBP3-203ENST00000574379 USP41Q3LFD5 358 aa10.77□□□□□ -0.69
NCBP3-203ENST00000574379 RTP2Q5QGT7 225 aa10.77□□□□□ -0.69
NCBP3-203ENST00000574379 FAM171A1Q5VUB5 890 aa10.77□□□□□ -0.69
NCBP3-203ENST00000574379 DAB2IPQ5VWQ8 1189 aa10.77□□□□□ -0.69
NCBP3-203ENST00000574379 SPATA1Q5VX52 437 aa10.77□□□□□ -0.69
NCBP3-203ENST00000574379 CYP26C1Q6V0L0 522 aa10.77□□□□□ -0.69
NCBP3-203ENST00000574379 MTSS1LQ765P7 747 aa10.77□□□□□ -0.69
NCBP3-203ENST00000574379 C12orf56Q8IXR9 622 aa10.77□□□□□ -0.69
NCBP3-203ENST00000574379 EFCAB13Q8IY85 973 aa10.77□□□□□ -0.69
NCBP3-203ENST00000574379 ELOA2Q8IYF1 753 aaPredicted RBP10.77□□□□□ -0.69
NCBP3-203ENST00000574379 GPR65Q8IYL9 337 aa10.77□□□□□ -0.69
NCBP3-203ENST00000574379 GPD1LQ8N335 351 aa10.77□□□□□ -0.69
NCBP3-203ENST00000574379 SPATA20Q8TB22 786 aa10.77□□□□□ -0.69
NCBP3-203ENST00000574379 B3GALT6Q96L58 329 aa10.77□□□□□ -0.69
NCBP3-203ENST00000574379 HNRNPABQ99729 332 aaKnown RBP10.77□□□□□ -0.69
NCBP3-203ENST00000574379 EDEM2Q9BV94 578 aa10.77□□□□□ -0.69
NCBP3-203ENST00000574379 KCTD10Q9H3F6 313 aa10.77□□□□□ -0.69
NCBP3-203ENST00000574379 RXFP1Q9HBX9 757 aa10.77□□□□□ -0.69
NCBP3-203ENST00000574379 RBAKQ9NYW8 714 aaPredicted RBP10.77□□□□□ -0.69
NCBP3-203ENST00000574379 CGNQ9P2M7 1197 aaKnown RBP10.77□□□□□ -0.69
NCBP3-203ENST00000574379 KLK13Q9UKR3 277 aa10.77□□□□□ -0.69
NCBP3-203ENST00000574379 SSX2IPQ9Y2D8 614 aa10.77□□□□□ -0.69
NCBP3-203ENST00000574379 C2CD2Q9Y426 696 aa10.77□□□□□ -0.69
NCBP3-203ENST00000574379 NOTCH4Q99466 2003 aa10.77□□□□□ -0.69
NCBP3-203ENST00000574379 PTPRDP23468 1912 aa10.76□□□□□ -0.69
NCBP3-203ENST00000574379 LAMA5O15230 3695 aa10.76□□□□□ -0.69
NCBP3-203ENST00000574379 I3L4J1 428 aa10.76□□□□□ -0.69
NCBP3-203ENST00000574379 SNPHO15079 494 aa10.76□□□□□ -0.69
NCBP3-203ENST00000574379 CLIC2O15247 247 aa10.76□□□□□ -0.69
NCBP3-203ENST00000574379 ADH1AP07327 375 aa10.76□□□□□ -0.69
NCBP3-203ENST00000574379 FGFR3P22607 806 aa10.76□□□□□ -0.69
NCBP3-203ENST00000574379 BRCC3P46736 316 aa10.76□□□□□ -0.69
NCBP3-203ENST00000574379 CYP2J2P51589 502 aa10.76□□□□□ -0.69
NCBP3-203ENST00000574379 UBE2HP62256 183 aa10.76□□□□□ -0.69
NCBP3-203ENST00000574379 TCEAL6Q6IPX3 200 aa10.76□□□□□ -0.69
NCBP3-203ENST00000574379 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.76□□□□□ -0.69
NCBP3-203ENST00000574379 HS2ST1Q7LGA3 356 aa10.76□□□□□ -0.69
NCBP3-203ENST00000574379 LONP2Q86WA8 852 aa10.76□□□□□ -0.69
NCBP3-203ENST00000574379 PROSER1Q86XN7 944 aa10.76□□□□□ -0.69
NCBP3-203ENST00000574379 NT5DC4Q86YG4 428 aa10.76□□□□□ -0.69
NCBP3-203ENST00000574379 CBWD2Q8IUF1 395 aa10.76□□□□□ -0.69
NCBP3-203ENST00000574379 BEST2Q8NFU1 509 aa10.76□□□□□ -0.69
NCBP3-203ENST00000574379 PIK3R5Q8WYR1 880 aa10.76□□□□□ -0.69
NCBP3-203ENST00000574379 TCEAL3Q969E4 200 aa10.76□□□□□ -0.69
NCBP3-203ENST00000574379 TTPALQ9BTX7 342 aa10.76□□□□□ -0.69
NCBP3-203ENST00000574379 LMAN1LQ9HAT1 526 aa10.76□□□□□ -0.69
NCBP3-203ENST00000574379 KIAA1586Q9HCI6 787 aa10.76□□□□□ -0.69
NCBP3-203ENST00000574379 FNIP2Q9P278 1114 aa10.76□□□□□ -0.69
NCBP3-203ENST00000574379 WASF3Q9UPY6 502 aa10.76□□□□□ -0.69
NCBP3-203ENST00000574379 NEUROG3Q9Y4Z2 214 aa10.76□□□□□ -0.69
NCBP3-203ENST00000574379 HELZ2Q9BYK8 2649 aaKnown RBP10.75□□□□□ -0.69
NCBP3-203ENST00000574379 ANO9A1A5B4 782 aa10.75□□□□□ -0.69
NCBP3-203ENST00000574379 ZNF233A6NK53 670 aa10.75□□□□□ -0.69
NCBP3-203ENST00000574379 PPEF2O14830 753 aa10.75□□□□□ -0.69
NCBP3-203ENST00000574379 TEX28O15482 410 aa10.75□□□□□ -0.69
NCBP3-203ENST00000574379 TRAPPC3O43617 180 aa10.75□□□□□ -0.69
NCBP3-203ENST00000574379 PRPF40AO75400 957 aaKnown RBP10.75□□□□□ -0.69
NCBP3-203ENST00000574379 AARSP49588 968 aaKnown RBP eCLIP10.75□□□□□ -0.69
NCBP3-203ENST00000574379 C9orf57Q5W0N0 161 aa10.75□□□□□ -0.69
NCBP3-203ENST00000574379 PRSS55Q6UWB4 352 aaPredicted RBP10.75□□□□□ -0.69
NCBP3-203ENST00000574379 PALB2Q86YC2 1186 aa10.75□□□□□ -0.69
NCBP3-203ENST00000574379 GLYCTKQ8IVS8 523 aa10.75□□□□□ -0.69
NCBP3-203ENST00000574379 GUF1Q8N442 669 aaKnown RBP10.75□□□□□ -0.69
NCBP3-203ENST00000574379 XXYLT1Q8NBI6 393 aa10.75□□□□□ -0.69
NCBP3-203ENST00000574379 GOLGA5Q8TBA6 731 aa10.75□□□□□ -0.69
NCBP3-203ENST00000574379 LNX1Q8TBB1 728 aaPredicted RBP10.75□□□□□ -0.69
NCBP3-203ENST00000574379 NOC3LQ8WTT2 800 aaKnown RBP10.75□□□□□ -0.69
NCBP3-203ENST00000574379 TMEM174Q8WUU8 243 aa10.75□□□□□ -0.69
NCBP3-203ENST00000574379 ERCC4Q92889 916 aaPredicted RBP10.75□□□□□ -0.69
NCBP3-203ENST00000574379 SUSD3Q96L08 255 aa10.75□□□□□ -0.69
NCBP3-203ENST00000574379 GSDMAQ96QA5 445 aa10.75□□□□□ -0.69
NCBP3-203ENST00000574379 CHRDQ9H2X0 955 aa10.75□□□□□ -0.69
NCBP3-203ENST00000574379 PDE11AQ9HCR9 933 aa10.75□□□□□ -0.69
NCBP3-203ENST00000574379 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.75□□□□□ -0.69
NCBP3-203ENST00000574379 DMAC2Q9NW81 257 aa10.75□□□□□ -0.69
NCBP3-203ENST00000574379 HOOK1Q9UJC3 728 aaKnown RBP10.75□□□□□ -0.69
NCBP3-203ENST00000574379 CDH7Q9ULB5 785 aa10.75□□□□□ -0.69
NCBP3-203ENST00000574379 POLIQ9UNA4 740 aa10.75□□□□□ -0.69
NCBP3-203ENST00000574379 PCDHA5Q9Y5H7 936 aa10.75□□□□□ -0.69
NCBP3-203ENST00000574379 ZFP37Q9Y6Q3 630 aaPredicted RBP10.75□□□□□ -0.69
NCBP3-203ENST00000574379 DENND4CQ5VZ89 1909 aa10.75□□□□□ -0.69
NCBP3-203ENST00000574379 MYH10P35580 1976 aa10.74□□□□□ -0.69
NCBP3-203ENST00000574379 M0QZQ0 153 aa10.74□□□□□ -0.69
NCBP3-203ENST00000574379 PIRO00625 290 aa10.74□□□□□ -0.69
NCBP3-203ENST00000574379 PDXKO00764 312 aa10.74□□□□□ -0.69
NCBP3-203ENST00000574379 SYN3O14994 580 aa10.74□□□□□ -0.69
NCBP3-203ENST00000574379 KIF20AO95235 890 aa10.74□□□□□ -0.69
NCBP3-203ENST00000574379 SMC2O95347 1197 aa10.74□□□□□ -0.69
NCBP3-203ENST00000574379 RPL17P18621 184 aaKnown RBP10.74□□□□□ -0.69
NCBP3-203ENST00000574379 TKTP29401 623 aaKnown RBP10.74□□□□□ -0.69
NCBP3-203ENST00000574379 MCM4P33991 863 aa10.74□□□□□ -0.69
NCBP3-203ENST00000574379 CREMQ03060 361 aa10.74□□□□□ -0.69
NCBP3-203ENST00000574379 CYP24A1Q07973 514 aa10.74□□□□□ -0.69
NCBP3-203ENST00000574379 PSMD5Q16401 504 aa10.74□□□□□ -0.69
NCBP3-203ENST00000574379 SNRNP35Q16560 246 aaKnown RBP10.74□□□□□ -0.69
NCBP3-203ENST00000574379 UAP1L1Q3KQV9 507 aa10.74□□□□□ -0.69
NCBP3-203ENST00000574379 PDXDC1Q6P996 788 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms