RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 TARSP26639 723 aaKnown RBP18.71■□□□□ 0.59
SMG6-214ENST00000573827 GABRR2P28476 465 aa18.71■□□□□ 0.59
SMG6-214ENST00000573827 CYP2J2P51589 502 aa18.71■□□□□ 0.59
SMG6-214ENST00000573827 NDUFA8P51970 172 aa18.71■□□□□ 0.59
SMG6-214ENST00000573827 KRT85P78386 507 aa18.71■□□□□ 0.59
SMG6-214ENST00000573827 TSPY1Q01534 308 aa18.71■□□□□ 0.59
SMG6-214ENST00000573827 FCHO2Q0JRZ9 810 aa18.71■□□□□ 0.59
SMG6-214ENST00000573827 KMT5BQ4FZB7 885 aa18.71■□□□□ 0.59
SMG6-214ENST00000573827 FAM171BQ6P995 826 aa18.71■□□□□ 0.59
SMG6-214ENST00000573827 DPH6Q7L8W6 267 aa18.71■□□□□ 0.59
SMG6-214ENST00000573827 HS2ST1Q7LGA3 356 aa18.71■□□□□ 0.59
SMG6-214ENST00000573827 ARID3BQ8IVW6 561 aaPredicted RBP18.71■□□□□ 0.59
SMG6-214ENST00000573827 MFSD6LQ8IWD5 586 aa18.71■□□□□ 0.59
SMG6-214ENST00000573827 CEP57L1Q8IYX8 460 aa18.71■□□□□ 0.59
SMG6-214ENST00000573827 ADGRF2Q8IZF7 708 aa18.71■□□□□ 0.59
SMG6-214ENST00000573827 RDH13Q8NBN7 331 aa18.71■□□□□ 0.59
SMG6-214ENST00000573827 GIPC2Q8TF65 315 aa18.71■□□□□ 0.59
SMG6-214ENST00000573827 DEPDC1BQ8WUY9 529 aa18.71■□□□□ 0.59
SMG6-214ENST00000573827 CLDN23Q96B33 292 aa18.71■□□□□ 0.59
SMG6-214ENST00000573827 TRMT61BQ9BVS5 477 aaKnown RBP18.71■□□□□ 0.59
SMG6-214ENST00000573827 ABCB6Q9NP58 842 aa18.71■□□□□ 0.59
SMG6-214ENST00000573827 CGNQ9P2M7 1197 aaKnown RBP18.71■□□□□ 0.59
SMG6-214ENST00000573827 USP25Q9UHP3 1055 aa18.71■□□□□ 0.59
SMG6-214ENST00000573827 PCDHB5Q9Y5E4 795 aa18.71■□□□□ 0.59
SMG6-214ENST00000573827 DCHS1Q96JQ0 3298 aa18.71■□□□□ 0.59
SMG6-214ENST00000573827 MIA3Q5JRA6 1907 aa18.7■□□□□ 0.58
SMG6-214ENST00000573827 CEP250Q9BV73 2442 aa18.7■□□□□ 0.58
SMG6-214ENST00000573827 MYBPHLA2RUH7 354 aa18.7■□□□□ 0.58
SMG6-214ENST00000573827 STK25O00506 426 aa18.7■□□□□ 0.58
SMG6-214ENST00000573827 PRAMEF12O95522 483 aa18.7■□□□□ 0.58
SMG6-214ENST00000573827 TNNC2P02585 160 aa18.7■□□□□ 0.58
SMG6-214ENST00000573827 F11P03951 625 aa18.7■□□□□ 0.58
SMG6-214ENST00000573827 PRR29P0C7W0 189 aa18.7■□□□□ 0.58
SMG6-214ENST00000573827 LMO2P25791 158 aa18.7■□□□□ 0.58
SMG6-214ENST00000573827 CLDN10P78369 228 aa18.7■□□□□ 0.58
SMG6-214ENST00000573827 NFE2Q16621 373 aaPredicted RBP18.7■□□□□ 0.58
SMG6-214ENST00000573827 TPRG1Q6ZUI0 275 aa18.7■□□□□ 0.58
SMG6-214ENST00000573827 FRMD5Q7Z6J6 570 aa18.7■□□□□ 0.58
SMG6-214ENST00000573827 STKLD1Q8NE28 680 aa18.7■□□□□ 0.58
SMG6-214ENST00000573827 NUP210Q8TEM1 1887 aaPredicted RBP18.7■□□□□ 0.58
SMG6-214ENST00000573827 PI4K2AQ9BTU6 479 aa18.7■□□□□ 0.58
SMG6-214ENST00000573827 XYLT2Q9H1B5 865 aa18.7■□□□□ 0.58
SMG6-214ENST00000573827 ATXN3LQ9H3M9 355 aa18.7■□□□□ 0.58
SMG6-214ENST00000573827 GOLPH3LQ9H4A5 285 aa18.7■□□□□ 0.58
SMG6-214ENST00000573827 GTF3C4Q9UKN8 822 aa18.7■□□□□ 0.58
SMG6-214ENST00000573827 DENND4CQ5VZ89 1909 aa18.7■□□□□ 0.58
SMG6-214ENST00000573827 FANCMQ8IYD8 2048 aa18.69■□□□□ 0.58
SMG6-214ENST00000573827 A0A1W2PQ27 194 aa18.69■□□□□ 0.58
SMG6-214ENST00000573827 A0A1W2PQ64 194 aa18.69■□□□□ 0.58
SMG6-214ENST00000573827 A0A1W2PQD8 194 aa18.69■□□□□ 0.58
SMG6-214ENST00000573827 ATP2C2O75185 946 aa18.69■□□□□ 0.58
SMG6-214ENST00000573827 TADA3O75528 432 aa18.69■□□□□ 0.58
SMG6-214ENST00000573827 FGF19O95750 216 aa18.69■□□□□ 0.58
SMG6-214ENST00000573827 MYL1P05976 194 aa18.69■□□□□ 0.58
SMG6-214ENST00000573827 DLATP10515 647 aaKnown RBP18.69■□□□□ 0.58
SMG6-214ENST00000573827 CYP2F1P24903 491 aa18.69■□□□□ 0.58
SMG6-214ENST00000573827 GDI1P31150 447 aa18.69■□□□□ 0.58
SMG6-214ENST00000573827 LHX1P48742 406 aa18.69■□□□□ 0.58
SMG6-214ENST00000573827 CYP4F8P98187 520 aa18.69■□□□□ 0.58
SMG6-214ENST00000573827 MYL7Q01449 175 aa18.69■□□□□ 0.58
SMG6-214ENST00000573827 CFAP221Q4G0U5 840 aa18.69■□□□□ 0.58
SMG6-214ENST00000573827 SDHAF4Q5VUM1 108 aa18.69■□□□□ 0.58
SMG6-214ENST00000573827 ASCL5Q7RTU5 278 aa18.69■□□□□ 0.58
SMG6-214ENST00000573827 GPIHBP1Q8IV16 184 aa18.69■□□□□ 0.58
SMG6-214ENST00000573827 SLC9A9Q8IVB4 645 aa18.69■□□□□ 0.58
SMG6-214ENST00000573827 CCDC127Q96BQ5 260 aa18.69■□□□□ 0.58
SMG6-214ENST00000573827 SLC46A2Q9BY10 475 aa18.69■□□□□ 0.58
SMG6-214ENST00000573827 BRD9Q9H8M2 597 aa18.69■□□□□ 0.58
SMG6-214ENST00000573827 CRTAC1Q9NQ79 661 aa18.69■□□□□ 0.58
SMG6-214ENST00000573827 KIF26AQ9ULI4 1882 aaPredicted RBP18.69■□□□□ 0.58
SMG6-214ENST00000573827 TICRRQ7Z2Z1 1910 aa18.68■□□□□ 0.58
SMG6-214ENST00000573827 FAM170BA6NMN3 283 aa18.68■□□□□ 0.58
SMG6-214ENST00000573827 NOL4O94818 638 aa18.68■□□□□ 0.58
SMG6-214ENST00000573827 STAU1O95793 577 aaKnown RBP18.68■□□□□ 0.58
SMG6-214ENST00000573827 WARSP23381 471 aaKnown RBP18.68■□□□□ 0.58
SMG6-214ENST00000573827 CASP4P49662 377 aa18.68■□□□□ 0.58
SMG6-214ENST00000573827 NLRP12P59046 1061 aa18.68■□□□□ 0.58
SMG6-214ENST00000573827 DPYDQ12882 1025 aa18.68■□□□□ 0.58
SMG6-214ENST00000573827 MYO1EQ12965 1108 aa18.68■□□□□ 0.58
SMG6-214ENST00000573827 PSMD2Q13200 908 aa18.68■□□□□ 0.58
SMG6-214ENST00000573827 VEPH1Q14D04 833 aa18.68■□□□□ 0.58
SMG6-214ENST00000573827 DDR2Q16832 855 aa18.68■□□□□ 0.58
SMG6-214ENST00000573827 GPR158Q5T848 1215 aa18.68■□□□□ 0.58
SMG6-214ENST00000573827 C1orf210Q8IVY1 113 aa18.68■□□□□ 0.58
SMG6-214ENST00000573827 IRF7Q92985 503 aa18.68■□□□□ 0.58
SMG6-214ENST00000573827 E2F7Q96AV8 911 aa18.68■□□□□ 0.58
SMG6-214ENST00000573827 MYRFLQ96LU7 910 aa18.68■□□□□ 0.58
SMG6-214ENST00000573827 MRPL45Q9BRJ2 306 aaKnown RBP18.68■□□□□ 0.58
SMG6-214ENST00000573827 SLITRK6Q9H5Y7 841 aa18.68■□□□□ 0.58
SMG6-214ENST00000573827 TASP1Q9H6P5 420 aa18.68■□□□□ 0.58
SMG6-214ENST00000573827 OBP2AQ9NY56 170 aa18.68■□□□□ 0.58
SMG6-214ENST00000573827 OBSL1O75147 1896 aa18.68■□□□□ 0.58
SMG6-214ENST00000573827 PTPRDP23468 1912 aa18.68■□□□□ 0.58
SMG6-214ENST00000573827 PATJQ8NI35 1801 aa18.67■□□□□ 0.58
SMG6-214ENST00000573827 PRR23AA6NEV1 266 aa18.67■□□□□ 0.58
SMG6-214ENST00000573827 TULP1O00294 542 aaPredicted RBP18.67■□□□□ 0.58
SMG6-214ENST00000573827 PRPF40AO75400 957 aaKnown RBP18.67■□□□□ 0.58
SMG6-214ENST00000573827 TACC1O75410 805 aa18.67■□□□□ 0.58
SMG6-214ENST00000573827 TNNI1P19237 187 aa18.67■□□□□ 0.58
SMG6-214ENST00000573827 RFX1P22670 979 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms