RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 SPAARA0A1B0GVQ0 90 aa13.19□□□□□ -0.3
PRPF8-208ENST00000573716 PP2D1A8MPX8 630 aa13.19□□□□□ -0.3
PRPF8-208ENST00000573716 TULP1O00294 542 aaPredicted RBP13.19□□□□□ -0.3
PRPF8-208ENST00000573716 MAPTP10636 758 aaKnown RBP13.19□□□□□ -0.3
PRPF8-208ENST00000573716 IFNAR2P48551 515 aa13.19□□□□□ -0.3
PRPF8-208ENST00000573716 FXR2P51116 673 aaKnown RBP eCLIP13.19□□□□□ -0.32e-11■■■■■ 33.7
PRPF8-208ENST00000573716 NLRP12P59046 1061 aa13.19□□□□□ -0.3
PRPF8-208ENST00000573716 NBR1Q14596 966 aa13.19□□□□□ -0.3
PRPF8-208ENST00000573716 ZBTB6Q15916 424 aa13.19□□□□□ -0.3
PRPF8-208ENST00000573716 C2orf27AQ580R0 203 aa13.19□□□□□ -0.3
PRPF8-208ENST00000573716 ZPBP2Q6X784 338 aa13.19□□□□□ -0.3
PRPF8-208ENST00000573716 C11orf74Q86VG3 221 aa13.19□□□□□ -0.3
PRPF8-208ENST00000573716 RIN3Q8TB24 985 aa13.19□□□□□ -0.3
PRPF8-208ENST00000573716 HAPLN2Q9GZV7 340 aa13.19□□□□□ -0.3
PRPF8-208ENST00000573716 ZCWPW1Q9H0M4 648 aa13.19□□□□□ -0.3
PRPF8-208ENST00000573716 ECT2Q9H8V3 914 aa13.19□□□□□ -0.3
PRPF8-208ENST00000573716 RPF1Q9H9Y2 349 aaKnown RBP13.19□□□□□ -0.3
PRPF8-208ENST00000573716 KIF9Q9HAQ2 790 aa13.19□□□□□ -0.3
PRPF8-208ENST00000573716 DUS2Q9NX74 493 aaKnown RBP13.19□□□□□ -0.3
PRPF8-208ENST00000573716 HSFX1Q9UBD0 423 aa13.19□□□□□ -0.3
PRPF8-208ENST00000573716 ZMYM5Q9UJ78 669 aa13.19□□□□□ -0.3
PRPF8-208ENST00000573716 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.19□□□□□ -0.3
PRPF8-208ENST00000573716 WNT6Q9Y6F9 365 aa13.19□□□□□ -0.3
PRPF8-208ENST00000573716 MAP3K13O43283 966 aa13.18□□□□□ -0.3
PRPF8-208ENST00000573716 SEC24BO95487 1268 aa13.18□□□□□ -0.3
PRPF8-208ENST00000573716 HAPLN1P10915 354 aaPredicted RBP13.18□□□□□ -0.3
PRPF8-208ENST00000573716 DDX6P26196 483 aaKnown RBP eCLIP13.18□□□□□ -0.3
PRPF8-208ENST00000573716 CDC25AP30304 524 aa13.18□□□□□ -0.3
PRPF8-208ENST00000573716 LIG4P49917 911 aa13.18□□□□□ -0.3
PRPF8-208ENST00000573716 SIM1P81133 766 aaPredicted RBP13.18□□□□□ -0.3
PRPF8-208ENST00000573716 ORC2Q13416 577 aaPredicted RBP13.18□□□□□ -0.3
PRPF8-208ENST00000573716 MTF1Q14872 753 aa13.18□□□□□ -0.3
PRPF8-208ENST00000573716 ENOX2Q16206 610 aaKnown RBP13.18□□□□□ -0.3
PRPF8-208ENST00000573716 TRIM61Q5EBN2 209 aa13.18□□□□□ -0.3
PRPF8-208ENST00000573716 SDHAF4Q5VUM1 108 aa13.18□□□□□ -0.3
PRPF8-208ENST00000573716 KRT79Q5XKE5 535 aa13.18□□□□□ -0.3
PRPF8-208ENST00000573716 JADE1Q6IE81 842 aa13.18□□□□□ -0.3
PRPF8-208ENST00000573716 C1orf186Q6ZWK4 172 aa13.18□□□□□ -0.3
PRPF8-208ENST00000573716 TMEM150AQ86TG1 271 aa13.18□□□□□ -0.3
PRPF8-208ENST00000573716 THEM5Q8N1Q8 247 aa13.18□□□□□ -0.3
PRPF8-208ENST00000573716 CCDC33Q8N5R6 958 aa13.18□□□□□ -0.3
PRPF8-208ENST00000573716 TMEM161BQ8NDZ6 487 aa13.18□□□□□ -0.3
PRPF8-208ENST00000573716 EZH1Q92800 747 aaPredicted RBP13.18□□□□□ -0.3
PRPF8-208ENST00000573716 PYM1Q9BRP8 204 aaKnown RBP13.18□□□□□ -0.3
PRPF8-208ENST00000573716 NUSAP1Q9BXS6 441 aaKnown RBP13.18□□□□□ -0.3
PRPF8-208ENST00000573716 RAB34Q9BZG1 259 aa13.18□□□□□ -0.3
PRPF8-208ENST00000573716 C17orf75Q9HAS0 396 aa13.18□□□□□ -0.3
PRPF8-208ENST00000573716 TBX20Q9UMR3 447 aa13.18□□□□□ -0.3
PRPF8-208ENST00000573716 NEUROG3Q9Y4Z2 214 aa13.18□□□□□ -0.3
PRPF8-208ENST00000573716 SCN1AP35498 2009 aa13.17□□□□□ -0.3
PRPF8-208ENST00000573716 CYB561D2O14569 222 aa13.17□□□□□ -0.3
PRPF8-208ENST00000573716 F11P03951 625 aa13.17□□□□□ -0.3
PRPF8-208ENST00000573716 CKMP06732 381 aa13.17□□□□□ -0.3
PRPF8-208ENST00000573716 PLS3P13797 630 aa13.17□□□□□ -0.3
PRPF8-208ENST00000573716 GPR15P49685 360 aa13.17□□□□□ -0.3
PRPF8-208ENST00000573716 LMAN2Q12907 356 aa13.17□□□□□ -0.3
PRPF8-208ENST00000573716 SPATA1Q5VX52 437 aa13.17□□□□□ -0.3
PRPF8-208ENST00000573716 C9orf57Q5W0N0 161 aa13.17□□□□□ -0.3
PRPF8-208ENST00000573716 C19orf48Q6RUI8 117 aa13.17□□□□□ -0.3
PRPF8-208ENST00000573716 KCNK18Q7Z418 384 aa13.17□□□□□ -0.3
PRPF8-208ENST00000573716 LRRTM3Q86VH5 581 aa13.17□□□□□ -0.3
PRPF8-208ENST00000573716 MON1AQ86VX9 555 aa13.17□□□□□ -0.3
PRPF8-208ENST00000573716 SPPL2BQ8TCT7 592 aa13.17□□□□□ -0.3
PRPF8-208ENST00000573716 SPIRE2Q8WWL2 714 aa13.17□□□□□ -0.3
PRPF8-208ENST00000573716 ATP2A3Q93084 1043 aa13.17□□□□□ -0.3
PRPF8-208ENST00000573716 C8orf76Q96K31 380 aa13.17□□□□□ -0.3
PRPF8-208ENST00000573716 PLIN2Q99541 437 aa13.17□□□□□ -0.3
PRPF8-208ENST00000573716 PI4K2AQ9BTU6 479 aa13.17□□□□□ -0.3
PRPF8-208ENST00000573716 DSEQ9UL01 958 aa13.17□□□□□ -0.3
PRPF8-208ENST00000573716 NOL7Q9UMY1 257 aaKnown RBP13.17□□□□□ -0.3
PRPF8-208ENST00000573716 MSRB2Q9Y3D2 182 aa13.17□□□□□ -0.3
PRPF8-208ENST00000573716 STK24Q9Y6E0 443 aa13.17□□□□□ -0.3
PRPF8-208ENST00000573716 NBEAQ8NFP9 2946 aa13.17□□□□□ -0.3
PRPF8-208ENST00000573716 ADAMTS9Q9P2N4 1935 aa13.17□□□□□ -0.3
PRPF8-208ENST00000573716 CACNA1EQ15878 2313 aa13.17□□□□□ -0.3
PRPF8-208ENST00000573716 ATXN2Q99700 1313 aaKnown RBP13.16□□□□□ -0.3
PRPF8-208ENST00000573716 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.16□□□□□ -0.3
PRPF8-208ENST00000573716 HNRNPDLO14979 420 aaKnown RBP13.16□□□□□ -0.3
PRPF8-208ENST00000573716 PRPF40AO75400 957 aaKnown RBP13.16□□□□□ -0.3
PRPF8-208ENST00000573716 CFIP05156 583 aa13.16□□□□□ -0.3
PRPF8-208ENST00000573716 NFICP08651 508 aa13.16□□□□□ -0.3
PRPF8-208ENST00000573716 HMGA1P17096 107 aaKnown RBP13.16□□□□□ -0.3
PRPF8-208ENST00000573716 NR1H3Q13133 447 aa13.16□□□□□ -0.3
PRPF8-208ENST00000573716 PDIA5Q14554 519 aa13.16□□□□□ -0.3
PRPF8-208ENST00000573716 TMEM132DQ14C87 1099 aa13.16□□□□□ -0.3
PRPF8-208ENST00000573716 KYAT1Q16773 422 aa13.16□□□□□ -0.3
PRPF8-208ENST00000573716 WSCD1Q658N2 575 aa13.16□□□□□ -0.3
PRPF8-208ENST00000573716 LPCAT2Q7L5N7 544 aa13.16□□□□□ -0.3
PRPF8-208ENST00000573716 TMEFF1Q8IYR6 380 aa13.16□□□□□ -0.3
PRPF8-208ENST00000573716 C2orf15Q8WU43 125 aaKnown RBP13.16□□□□□ -0.3
PRPF8-208ENST00000573716 OSCP1Q8WVF1 389 aa13.16□□□□□ -0.3
PRPF8-208ENST00000573716 RLN3Q8WXF3 142 aa13.16□□□□□ -0.3
PRPF8-208ENST00000573716 CYP2S1Q96SQ9 504 aa13.16□□□□□ -0.3
PRPF8-208ENST00000573716 NTPCRQ9BSD7 190 aaKnown RBP13.16□□□□□ -0.3
PRPF8-208ENST00000573716 MSTO1Q9BUK6 570 aa13.16□□□□□ -0.3
PRPF8-208ENST00000573716 TIPINQ9BVW5 301 aa13.16□□□□□ -0.3
PRPF8-208ENST00000573716 GTPBP2Q9BX10 602 aaKnown RBP13.16□□□□□ -0.3
PRPF8-208ENST00000573716 BCCIPQ9P287 314 aaKnown RBP eCLIP13.16□□□□□ -0.3
PRPF8-208ENST00000573716 PCDHB5Q9Y5E4 795 aa13.16□□□□□ -0.3
PRPF8-208ENST00000573716 ADAMTS20P59510 1910 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms