RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 FARP1Q9Y4F1 1045 aaPredicted RBP16.45■□□□□ 0.22
NUP88-207ENST00000573584 TCRBV5S1A1TA0A578 114 aa16.45■□□□□ 0.22
NUP88-207ENST00000573584 VWA5AO00534 786 aa16.45■□□□□ 0.22
NUP88-207ENST00000573584 LUC7L3O95232 432 aaKnown RBP16.45■□□□□ 0.22
NUP88-207ENST00000573584 TPBGLP0DKB5 382 aa16.45■□□□□ 0.22
NUP88-207ENST00000573584 HARSP12081 509 aaKnown RBP16.45■□□□□ 0.22
NUP88-207ENST00000573584 PSMC4P43686 418 aa16.45■□□□□ 0.22
NUP88-207ENST00000573584 ZNF132P52740 706 aa16.45■□□□□ 0.22
NUP88-207ENST00000573584 RAD23BP54727 409 aa16.45■□□□□ 0.22
NUP88-207ENST00000573584 MTMR2Q13614 643 aa16.45■□□□□ 0.22
NUP88-207ENST00000573584 SLC35B2Q8TB61 432 aa16.45■□□□□ 0.22
NUP88-207ENST00000573584 ASAP3Q8TDY4 903 aa16.45■□□□□ 0.22
NUP88-207ENST00000573584 DCTN4Q9UJW0 460 aa16.45■□□□□ 0.22
NUP88-207ENST00000573584 ZMYND8Q9ULU4 1186 aaPredicted RBP16.45■□□□□ 0.22
NUP88-207ENST00000573584 AGTPBP1Q9UPW5 1226 aa16.45■□□□□ 0.22
NUP88-207ENST00000573584 TRAFD1O14545 582 aaPredicted RBP16.44■□□□□ 0.22
NUP88-207ENST00000573584 BRD2P25440 801 aaKnown RBP16.44■□□□□ 0.22
NUP88-207ENST00000573584 PSEN1P49768 467 aa16.44■□□□□ 0.22
NUP88-207ENST00000573584 ARL4CP56559 192 aa16.44■□□□□ 0.22
NUP88-207ENST00000573584 MSS51Q4VC12 460 aa16.44■□□□□ 0.22
NUP88-207ENST00000573584 PLEKHG4Q58EX7 1191 aa16.44■□□□□ 0.22
NUP88-207ENST00000573584 FNBP1LQ5T0N5 605 aa16.44■□□□□ 0.22
NUP88-207ENST00000573584 ANKRD22Q5VYY1 191 aa16.44■□□□□ 0.22
NUP88-207ENST00000573584 ABHD15Q6UXT9 468 aa16.44■□□□□ 0.22
NUP88-207ENST00000573584 ATP11CQ8NB49 1132 aa16.44■□□□□ 0.22
NUP88-207ENST00000573584 TMEM35BQ8NCS4 154 aa16.44■□□□□ 0.22
NUP88-207ENST00000573584 ATG4CQ96DT6 458 aa16.44■□□□□ 0.22
NUP88-207ENST00000573584 FAM167BQ9BTA0 163 aa16.44■□□□□ 0.22
NUP88-207ENST00000573584 LRRC42Q9Y546 428 aa16.44■□□□□ 0.22
NUP88-207ENST00000573584 CNTNAP2Q9UHC6 1331 aa16.44■□□□□ 0.22
NUP88-207ENST00000573584 A0A0B4J269 797 aa16.44■□□□□ 0.22
NUP88-207ENST00000573584 E7ENQ6 273 aa16.44■□□□□ 0.22
NUP88-207ENST00000573584 CST3P01034 146 aaPredicted RBP16.44■□□□□ 0.22
NUP88-207ENST00000573584 TROVE2P10155 538 aaKnown RBP eCLIP16.44■□□□□ 0.22
NUP88-207ENST00000573584 PTPN4P29074 926 aa16.44■□□□□ 0.22
NUP88-207ENST00000573584 SPDYAQ5MJ70 313 aa16.44■□□□□ 0.22
NUP88-207ENST00000573584 RHPN2Q8IUC4 686 aa16.44■□□□□ 0.22
NUP88-207ENST00000573584 PPIL6Q8IXY8 311 aa16.44■□□□□ 0.22
NUP88-207ENST00000573584 TAB3Q8N5C8 712 aaPredicted RBP16.44■□□□□ 0.22
NUP88-207ENST00000573584 TCP10LQ8TDR4 215 aa16.44■□□□□ 0.22
NUP88-207ENST00000573584 NSUN6Q8TEA1 469 aaKnown RBP16.44■□□□□ 0.22
NUP88-207ENST00000573584 PAFAH2Q99487 392 aa16.44■□□□□ 0.22
NUP88-207ENST00000573584 SNCAIPQ9Y6H5 919 aa16.44■□□□□ 0.22
NUP88-207ENST00000573584 GOLGA8RI6L899 631 aa16.43■□□□□ 0.22
NUP88-207ENST00000573584 SMNDC1O75940 238 aaKnown RBP eCLIP16.43■□□□□ 0.22
NUP88-207ENST00000573584 LSM8O95777 96 aaKnown RBP16.43■□□□□ 0.22
NUP88-207ENST00000573584 GDF10P55107 478 aa16.43■□□□□ 0.22
NUP88-207ENST00000573584 OVGP1Q12889 678 aa16.43■□□□□ 0.22
NUP88-207ENST00000573584 MTM1Q13496 603 aa16.43■□□□□ 0.22
NUP88-207ENST00000573584 BLMHQ13867 455 aa16.43■□□□□ 0.22
NUP88-207ENST00000573584 WASHC2DQ5SRD0 308 aa16.43■□□□□ 0.22
NUP88-207ENST00000573584 TRIM68Q6AZZ1 485 aa16.43■□□□□ 0.22
NUP88-207ENST00000573584 ADGRD1Q6QNK2 874 aa16.43■□□□□ 0.22
NUP88-207ENST00000573584 CLNKQ7Z7G1 428 aa16.43■□□□□ 0.22
NUP88-207ENST00000573584 ACTL9Q8TC94 416 aa16.43■□□□□ 0.22
NUP88-207ENST00000573584 CPT1BQ92523 772 aa16.43■□□□□ 0.22
NUP88-207ENST00000573584 DENND2DQ9H6A0 471 aaPredicted RBP16.43■□□□□ 0.22
NUP88-207ENST00000573584 ZNF277Q9NRM2 450 aaPredicted RBP16.43■□□□□ 0.22
NUP88-207ENST00000573584 FETUBQ9UGM5 382 aa16.43■□□□□ 0.22
NUP88-207ENST00000573584 ZNRF3Q9ULT6 936 aa16.43■□□□□ 0.22
NUP88-207ENST00000573584 H0Y3Z8 333 aa16.43■□□□□ 0.22
NUP88-207ENST00000573584 WNT10BO00744 389 aa16.43■□□□□ 0.22
NUP88-207ENST00000573584 ENTPD5O75356 428 aa16.43■□□□□ 0.22
NUP88-207ENST00000573584 APBA3O96018 575 aa16.43■□□□□ 0.22
NUP88-207ENST00000573584 PIGRP01833 764 aa16.43■□□□□ 0.22
NUP88-207ENST00000573584 ABL2P42684 1182 aa16.43■□□□□ 0.22
NUP88-207ENST00000573584 OTUD4Q01804 1114 aaKnown RBP16.43■□□□□ 0.22
NUP88-207ENST00000573584 CYP4A22Q5TCH4 519 aa16.43■□□□□ 0.22
NUP88-207ENST00000573584 CAPRIN2Q6IMN6 1127 aaKnown RBP16.43■□□□□ 0.22
NUP88-207ENST00000573584 GPAT2Q6NUI2 795 aa16.43■□□□□ 0.22
NUP88-207ENST00000573584 PORCNQ9H237 461 aa16.43■□□□□ 0.22
NUP88-207ENST00000573584 C12orf65Q9H3J6 166 aaKnown RBP16.43■□□□□ 0.22
NUP88-207ENST00000573584 SAR1AQ9NR31 198 aa16.43■□□□□ 0.22
NUP88-207ENST00000573584 SRCAPQ6ZRS2 3230 aa16.43■□□□□ 0.22
NUP88-207ENST00000573584 TAP1Q03518 808 aa16.42■□□□□ 0.22
NUP88-207ENST00000573584 SMTNL2Q2TAL5 461 aa16.42■□□□□ 0.22
NUP88-207ENST00000573584 ZC3H12AQ5D1E8 599 aaKnown RBP16.42■□□□□ 0.22
NUP88-207ENST00000573584 PPP1R15BQ5SWA1 713 aa16.42■□□□□ 0.22
NUP88-207ENST00000573584 PALM2Q8IXS6 379 aa16.42■□□□□ 0.22
NUP88-207ENST00000573584 FBXO36Q8NEA4 188 aa16.42■□□□□ 0.22
NUP88-207ENST00000573584 TTC8Q8TAM2 541 aa16.42■□□□□ 0.22
NUP88-207ENST00000573584 ZNF398Q8TD17 642 aa16.42■□□□□ 0.22
NUP88-207ENST00000573584 KLF6Q99612 283 aaPredicted RBP16.42■□□□□ 0.22
NUP88-207ENST00000573584 ACSS3Q9H6R3 686 aa16.42■□□□□ 0.22
NUP88-207ENST00000573584 LIN7AO14910 233 aaPredicted RBP16.42■□□□□ 0.22
NUP88-207ENST00000573584 CST8O60676 142 aa16.42■□□□□ 0.22
NUP88-207ENST00000573584 MARK3P27448 753 aa16.42■□□□□ 0.22
NUP88-207ENST00000573584 NAMPTP43490 491 aa16.42■□□□□ 0.22
NUP88-207ENST00000573584 KLHL38Q2WGJ6 581 aa16.42■□□□□ 0.22
NUP88-207ENST00000573584 ZNF276Q8N554 614 aa16.42■□□□□ 0.22
NUP88-207ENST00000573584 WDTC1Q8N5D0 677 aa16.42■□□□□ 0.22
NUP88-207ENST00000573584 UBR7Q8N806 425 aa16.42■□□□□ 0.22
NUP88-207ENST00000573584 ENDOVQ8N8Q3 282 aaKnown RBP16.42■□□□□ 0.22
NUP88-207ENST00000573584 NAT8LQ8N9F0 302 aa16.42■□□□□ 0.22
NUP88-207ENST00000573584 MTMR14Q8NCE2 650 aa16.42■□□□□ 0.22
NUP88-207ENST00000573584 RFWD2Q8NHY2 731 aa16.42■□□□□ 0.22
NUP88-207ENST00000573584 RSAD2Q8WXG1 361 aa16.42■□□□□ 0.22
NUP88-207ENST00000573584 ZWILCHQ9H900 591 aa16.42■□□□□ 0.22
NUP88-207ENST00000573584 SLC17A7Q9P2U7 560 aa16.42■□□□□ 0.22
NUP88-207ENST00000573584 LNPEPQ9UIQ6 1025 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms