RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 PSMD2Q13200 908 aa13.62□□□□□ -0.23
NPLOC4-213ENST00000573519 TRPC3Q13507 836 aa13.62□□□□□ -0.23
NPLOC4-213ENST00000573519 SDHAF4Q5VUM1 108 aa13.62□□□□□ -0.23
NPLOC4-213ENST00000573519 SPATA2LQ8IUW3 424 aaPredicted RBP13.62□□□□□ -0.23
NPLOC4-213ENST00000573519 ARID3BQ8IVW6 561 aaPredicted RBP13.62□□□□□ -0.23
NPLOC4-213ENST00000573519 KIAA0895Q8NCT3 520 aa13.62□□□□□ -0.23
NPLOC4-213ENST00000573519 STKLD1Q8NE28 680 aa13.62□□□□□ -0.23
NPLOC4-213ENST00000573519 GOLGA5Q8TBA6 731 aa13.62□□□□□ -0.23
NPLOC4-213ENST00000573519 DEPDC1BQ8WUY9 529 aa13.62□□□□□ -0.23
NPLOC4-213ENST00000573519 DNASE1L2Q92874 299 aa13.62□□□□□ -0.23
NPLOC4-213ENST00000573519 IRF7Q92985 503 aa13.62□□□□□ -0.23
NPLOC4-213ENST00000573519 CCDC47Q96A33 483 aaKnown RBP13.62□□□□□ -0.23
NPLOC4-213ENST00000573519 E2F7Q96AV8 911 aa13.62□□□□□ -0.23
NPLOC4-213ENST00000573519 BCO2Q9BYV7 579 aa13.62□□□□□ -0.23
NPLOC4-213ENST00000573519 MTF2Q9Y483 593 aaPredicted RBP13.62□□□□□ -0.23
NPLOC4-213ENST00000573519 A0A1W2PQ27 194 aa13.61□□□□□ -0.23
NPLOC4-213ENST00000573519 A0A1W2PQ64 194 aa13.61□□□□□ -0.23
NPLOC4-213ENST00000573519 A0A1W2PQD8 194 aa13.61□□□□□ -0.23
NPLOC4-213ENST00000573519 PHACTR2O75167 634 aa13.61□□□□□ -0.23
NPLOC4-213ENST00000573519 CST3P01034 146 aaPredicted RBP13.61□□□□□ -0.23
NPLOC4-213ENST00000573519 RPN1P04843 607 aaKnown RBP13.61□□□□□ -0.23
NPLOC4-213ENST00000573519 MYL1P05976 194 aa13.61□□□□□ -0.23
NPLOC4-213ENST00000573519 PDGFRBP09619 1106 aa13.61□□□□□ -0.23
NPLOC4-213ENST00000573519 PRR29P0C7W0 189 aa13.61□□□□□ -0.23
NPLOC4-213ENST00000573519 CYP2F1P24903 491 aa13.61□□□□□ -0.23
NPLOC4-213ENST00000573519 CASP4P49662 377 aa13.61□□□□□ -0.23
NPLOC4-213ENST00000573519 PSMC1P62191 440 aaKnown RBP13.61□□□□□ -0.23
NPLOC4-213ENST00000573519 TNNC1P63316 161 aa13.61□□□□□ -0.23
NPLOC4-213ENST00000573519 DDR2Q16832 855 aa13.61□□□□□ -0.23
NPLOC4-213ENST00000573519 CCDC142Q17RM4 750 aa13.61□□□□□ -0.23
NPLOC4-213ENST00000573519 ZNF852Q6ZMS4 543 aa13.61□□□□□ -0.23
NPLOC4-213ENST00000573519 DPH6Q7L8W6 267 aa13.61□□□□□ -0.23
NPLOC4-213ENST00000573519 FRMD5Q7Z6J6 570 aa13.61□□□□□ -0.23
NPLOC4-213ENST00000573519 MFSD6LQ8IWD5 586 aa13.61□□□□□ -0.23
NPLOC4-213ENST00000573519 SCN4BQ8IWT1 228 aa13.61□□□□□ -0.23
NPLOC4-213ENST00000573519 C12orf56Q8IXR9 622 aa13.61□□□□□ -0.23
NPLOC4-213ENST00000573519 SPATA18Q8TC71 538 aa13.61□□□□□ -0.23
NPLOC4-213ENST00000573519 CSGALNACT1Q8TDX6 532 aa13.61□□□□□ -0.23
NPLOC4-213ENST00000573519 DDX23Q9BUQ8 820 aaKnown RBP13.61□□□□□ -0.23
NPLOC4-213ENST00000573519 SNX25Q9H3E2 840 aa13.61□□□□□ -0.23
NPLOC4-213ENST00000573519 TRPV4Q9HBA0 871 aa13.61□□□□□ -0.23
NPLOC4-213ENST00000573519 LTB4R2Q9NPC1 389 aa13.61□□□□□ -0.23
NPLOC4-213ENST00000573519 NCANO14594 1321 aa13.61□□□□□ -0.23
NPLOC4-213ENST00000573519 ZDBF2Q9HCK1 2354 aa13.6□□□□□ -0.23
NPLOC4-213ENST00000573519 FAM237AA0A1B0GTK4 181 aa13.6□□□□□ -0.23
NPLOC4-213ENST00000573519 MYBPHLA2RUH7 354 aa13.6□□□□□ -0.23
NPLOC4-213ENST00000573519 GABRDO14764 452 aa13.6□□□□□ -0.23
NPLOC4-213ENST00000573519 GFRA3O60609 400 aa13.6□□□□□ -0.23
NPLOC4-213ENST00000573519 ATP2C2O75185 946 aa13.6□□□□□ -0.23
NPLOC4-213ENST00000573519 CSH1P0DML2 217 aa13.6□□□□□ -0.23
NPLOC4-213ENST00000573519 CSH2P0DML3 217 aa13.6□□□□□ -0.23
NPLOC4-213ENST00000573519 GLULP15104 373 aa13.6□□□□□ -0.23
NPLOC4-213ENST00000573519 LMO2P25791 158 aa13.6□□□□□ -0.23
NPLOC4-213ENST00000573519 RPL10AP62906 217 aaKnown RBP13.6□□□□□ -0.23
NPLOC4-213ENST00000573519 CYP27A1Q02318 531 aa13.6□□□□□ -0.23
NPLOC4-213ENST00000573519 BIRC3Q13489 604 aa13.6□□□□□ -0.23
NPLOC4-213ENST00000573519 WDR72Q3MJ13 1102 aa13.6□□□□□ -0.23
NPLOC4-213ENST00000573519 C4orf50Q6ZRC1 276 aa13.6□□□□□ -0.23
NPLOC4-213ENST00000573519 KBTBD7Q8WVZ9 684 aa13.6□□□□□ -0.23
NPLOC4-213ENST00000573519 RSPRY1Q96DX4 576 aa13.6□□□□□ -0.23
NPLOC4-213ENST00000573519 SYT15Q9BQS2 421 aa13.6□□□□□ -0.23
NPLOC4-213ENST00000573519 MKNK1Q9BUB5 465 aa13.6□□□□□ -0.23
NPLOC4-213ENST00000573519 SMG9Q9H0W8 520 aaKnown RBP13.6□□□□□ -0.23
NPLOC4-213ENST00000573519 TASP1Q9H6P5 420 aa13.6□□□□□ -0.23
NPLOC4-213ENST00000573519 IL21Q9HBE4 155 aa13.6□□□□□ -0.23
NPLOC4-213ENST00000573519 SPATA6Q9NWH7 488 aaPredicted RBP13.6□□□□□ -0.23
NPLOC4-213ENST00000573519 DLGAP2Q9P1A6 1054 aa13.6□□□□□ -0.23
NPLOC4-213ENST00000573519 NXF1Q9UBU9 619 aaKnown RBP13.6□□□□□ -0.23
NPLOC4-213ENST00000573519 CDH9Q9ULB4 789 aa13.6□□□□□ -0.23
NPLOC4-213ENST00000573519 NDRG2Q9UN36 371 aaKnown RBP13.6□□□□□ -0.23
NPLOC4-213ENST00000573519 MRPS17Q9Y2R5 130 aaKnown RBP13.6□□□□□ -0.23
NPLOC4-213ENST00000573519 PIAS3Q9Y6X2 628 aa13.6□□□□□ -0.23
NPLOC4-213ENST00000573519 NCAM2O15394 837 aa13.59□□□□□ -0.23
NPLOC4-213ENST00000573519 CALUO43852 315 aaPredicted RBP13.59□□□□□ -0.23
NPLOC4-213ENST00000573519 KIF20AO95235 890 aa13.59□□□□□ -0.23
NPLOC4-213ENST00000573519 NR3C1P04150 777 aa13.59□□□□□ -0.23
NPLOC4-213ENST00000573519 WARSP23381 471 aaKnown RBP13.59□□□□□ -0.23
NPLOC4-213ENST00000573519 TARSP26639 723 aaKnown RBP13.59□□□□□ -0.23
NPLOC4-213ENST00000573519 AVPR1AP37288 418 aa13.59□□□□□ -0.23
NPLOC4-213ENST00000573519 NBL1P41271 181 aa13.59□□□□□ -0.23
NPLOC4-213ENST00000573519 MYL6P60660 151 aa13.59□□□□□ -0.23
NPLOC4-213ENST00000573519 CEP135Q66GS9 1140 aa13.59□□□□□ -0.23
NPLOC4-213ENST00000573519 KRBA2Q6ZNG9 492 aa13.59□□□□□ -0.23
NPLOC4-213ENST00000573519 C1orf210Q8IVY1 113 aa13.59□□□□□ -0.23
NPLOC4-213ENST00000573519 MAB21L3Q8N8X9 362 aa13.59□□□□□ -0.23
NPLOC4-213ENST00000573519 OR6B3Q8NGW1 331 aa13.59□□□□□ -0.23
NPLOC4-213ENST00000573519 TTC8Q8TAM2 541 aa13.59□□□□□ -0.23
NPLOC4-213ENST00000573519 ZNF516Q92618 1163 aa13.59□□□□□ -0.23
NPLOC4-213ENST00000573519 MYLPFQ96A32 169 aa13.59□□□□□ -0.23
NPLOC4-213ENST00000573519 NELL2Q99435 816 aa13.59□□□□□ -0.23
NPLOC4-213ENST00000573519 PKMYT1Q99640 499 aa13.59□□□□□ -0.23
NPLOC4-213ENST00000573519 MRPL45Q9BRJ2 306 aaKnown RBP13.59□□□□□ -0.23
NPLOC4-213ENST00000573519 KCTD10Q9H3F6 313 aa13.59□□□□□ -0.23
NPLOC4-213ENST00000573519 ABCB6Q9NP58 842 aa13.59□□□□□ -0.23
NPLOC4-213ENST00000573519 MAGEC2Q9UBF1 373 aaPredicted RBP13.59□□□□□ -0.23
NPLOC4-213ENST00000573519 MAPK8IP1Q9UQF2 711 aa13.59□□□□□ -0.23
NPLOC4-213ENST00000573519 GOLGA6L4A6NEF3 574 aa13.58□□□□□ -0.24
NPLOC4-213ENST00000573519 SLC38A8A6NNN8 435 aa13.58□□□□□ -0.24
NPLOC4-213ENST00000573519 LRRIQ3A6PVS8 624 aaPredicted RBP13.58□□□□□ -0.24
NPLOC4-213ENST00000573519 MAN2B1O00754 1011 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms