RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 RIN3Q8TB24 985 aa18.59■□□□□ 0.57
SMG6-212ENST00000573153 NOC3LQ8WTT2 800 aaKnown RBP18.59■□□□□ 0.57
SMG6-212ENST00000573153 ANKRD36BP1Q96IX9 119 aa18.59■□□□□ 0.57
SMG6-212ENST00000573153 LTB4R2Q9NPC1 389 aa18.59■□□□□ 0.57
SMG6-212ENST00000573153 CRTAC1Q9NQ79 661 aa18.59■□□□□ 0.57
SMG6-212ENST00000573153 TRPV5Q9NQA5 729 aa18.59■□□□□ 0.57
SMG6-212ENST00000573153 HEBP1Q9NRV9 189 aa18.59■□□□□ 0.57
SMG6-212ENST00000573153 ABI2Q9NYB9 513 aaPredicted RBP18.59■□□□□ 0.57
SMG6-212ENST00000573153 FANCMQ8IYD8 2048 aa18.58■□□□□ 0.56
SMG6-212ENST00000573153 MYBPHLA2RUH7 354 aa18.58■□□□□ 0.56
SMG6-212ENST00000573153 HEPACAM2A8MVW5 462 aa18.58■□□□□ 0.56
SMG6-212ENST00000573153 ATP2C2O75185 946 aa18.58■□□□□ 0.56
SMG6-212ENST00000573153 KRT19P08727 400 aa18.58■□□□□ 0.56
SMG6-212ENST00000573153 LMO2P25791 158 aa18.58■□□□□ 0.56
SMG6-212ENST00000573153 GABRR2P28476 465 aa18.58■□□□□ 0.56
SMG6-212ENST00000573153 WEE1P30291 646 aa18.58■□□□□ 0.56
SMG6-212ENST00000573153 CASP4P49662 377 aa18.58■□□□□ 0.56
SMG6-212ENST00000573153 CYP4F8P98187 520 aa18.58■□□□□ 0.56
SMG6-212ENST00000573153 PFKPQ01813 784 aa18.58■□□□□ 0.56
SMG6-212ENST00000573153 DPYDQ12882 1025 aa18.58■□□□□ 0.56
SMG6-212ENST00000573153 DUOXA2Q1HG44 320 aa18.58■□□□□ 0.56
SMG6-212ENST00000573153 SDHAF4Q5VUM1 108 aa18.58■□□□□ 0.56
SMG6-212ENST00000573153 DPH6Q7L8W6 267 aa18.58■□□□□ 0.56
SMG6-212ENST00000573153 HS2ST1Q7LGA3 356 aa18.58■□□□□ 0.56
SMG6-212ENST00000573153 GIPC2Q8TF65 315 aa18.58■□□□□ 0.56
SMG6-212ENST00000573153 ATOH1Q92858 354 aaPredicted RBP18.58■□□□□ 0.56
SMG6-212ENST00000573153 HPDLQ96IR7 371 aa18.58■□□□□ 0.56
SMG6-212ENST00000573153 PI4K2AQ9BTU6 479 aa18.58■□□□□ 0.56
SMG6-212ENST00000573153 GTF3C4Q9UKN8 822 aa18.58■□□□□ 0.56
SMG6-212ENST00000573153 SIT1Q9Y3P8 196 aa18.58■□□□□ 0.56
SMG6-212ENST00000573153 GREB1Q4ZG55 1949 aa18.58■□□□□ 0.56
SMG6-212ENST00000573153 HUS1O60921 280 aa18.57■□□□□ 0.56
SMG6-212ENST00000573153 STAU1O95793 577 aaKnown RBP18.57■□□□□ 0.56
SMG6-212ENST00000573153 PSMC3P17980 439 aa18.57■□□□□ 0.56
SMG6-212ENST00000573153 WARSP23381 471 aaKnown RBP18.57■□□□□ 0.56
SMG6-212ENST00000573153 NUCB2P80303 420 aa18.57■□□□□ 0.56
SMG6-212ENST00000573153 CFAP221Q4G0U5 840 aa18.57■□□□□ 0.56
SMG6-212ENST00000573153 C1orf220Q5T0J3 134 aa18.57■□□□□ 0.56
SMG6-212ENST00000573153 TPRG1Q6ZUI0 275 aa18.57■□□□□ 0.56
SMG6-212ENST00000573153 ASCL5Q7RTU5 278 aa18.57■□□□□ 0.56
SMG6-212ENST00000573153 SLC9A9Q8IVB4 645 aa18.57■□□□□ 0.56
SMG6-212ENST00000573153 ARID3BQ8IVW6 561 aaPredicted RBP18.57■□□□□ 0.56
SMG6-212ENST00000573153 MFSD6LQ8IWD5 586 aa18.57■□□□□ 0.56
SMG6-212ENST00000573153 DCP1BQ8IZD4 617 aaKnown RBP18.57■□□□□ 0.56
SMG6-212ENST00000573153 GOLGA5Q8TBA6 731 aa18.57■□□□□ 0.56
SMG6-212ENST00000573153 DEPDC1BQ8WUY9 529 aa18.57■□□□□ 0.56
SMG6-212ENST00000573153 CLDN23Q96B33 292 aa18.57■□□□□ 0.56
SMG6-212ENST00000573153 MRPL45Q9BRJ2 306 aaKnown RBP18.57■□□□□ 0.56
SMG6-212ENST00000573153 OSBPL6Q9BZF3 934 aa18.57■□□□□ 0.56
SMG6-212ENST00000573153 GPR88Q9GZN0 384 aa18.57■□□□□ 0.56
SMG6-212ENST00000573153 GDPD2Q9HCC8 539 aa18.57■□□□□ 0.56
SMG6-212ENST00000573153 ABCB6Q9NP58 842 aa18.57■□□□□ 0.56
SMG6-212ENST00000573153 EXOC1Q9NV70 894 aa18.57■□□□□ 0.56
SMG6-212ENST00000573153 PCDHB5Q9Y5E4 795 aa18.57■□□□□ 0.56
SMG6-212ENST00000573153 F5P12259 2224 aa18.56■□□□□ 0.56
SMG6-212ENST00000573153 LRRIQ3A6PVS8 624 aaPredicted RBP18.56■□□□□ 0.56
SMG6-212ENST00000573153 NOL4O94818 638 aa18.56■□□□□ 0.56
SMG6-212ENST00000573153 TNNC2P02585 160 aa18.56■□□□□ 0.56
SMG6-212ENST00000573153 DLATP10515 647 aaKnown RBP18.56■□□□□ 0.56
SMG6-212ENST00000573153 CYP2F1P24903 491 aa18.56■□□□□ 0.56
SMG6-212ENST00000573153 TDRD10Q5VZ19 366 aaKnown RBP18.56■□□□□ 0.56
SMG6-212ENST00000573153 ITIH5Q86UX2 942 aa18.56■□□□□ 0.56
SMG6-212ENST00000573153 GPIHBP1Q8IV16 184 aa18.56■□□□□ 0.56
SMG6-212ENST00000573153 CCDC127Q96BQ5 260 aa18.56■□□□□ 0.56
SMG6-212ENST00000573153 TRMT61BQ9BVS5 477 aaKnown RBP18.56■□□□□ 0.56
SMG6-212ENST00000573153 SLC46A2Q9BY10 475 aa18.56■□□□□ 0.56
SMG6-212ENST00000573153 IRF2BPLQ9H1B7 796 aa18.56■□□□□ 0.56
SMG6-212ENST00000573153 ATXN3LQ9H3M9 355 aa18.56■□□□□ 0.56
SMG6-212ENST00000573153 TMEM30AQ9NV96 361 aa18.56■□□□□ 0.56
SMG6-212ENST00000573153 CACNA1IQ9P0X4 2223 aa18.55■□□□□ 0.56
SMG6-212ENST00000573153 PRPF40AO75400 957 aaKnown RBP18.55■□□□□ 0.56
SMG6-212ENST00000573153 RHOBTB3O94955 611 aa18.55■□□□□ 0.56
SMG6-212ENST00000573153 VNN1O95497 513 aa18.55■□□□□ 0.56
SMG6-212ENST00000573153 GDI1P31150 447 aa18.55■□□□□ 0.56
SMG6-212ENST00000573153 NLRP12P59046 1061 aa18.55■□□□□ 0.56
SMG6-212ENST00000573153 PSMC1P62191 440 aaKnown RBP18.55■□□□□ 0.56
SMG6-212ENST00000573153 DLG4P78352 724 aa18.55■□□□□ 0.56
SMG6-212ENST00000573153 TSPY1Q01534 308 aa18.55■□□□□ 0.56
SMG6-212ENST00000573153 NFE2Q16621 373 aaPredicted RBP18.55■□□□□ 0.56
SMG6-212ENST00000573153 DDR2Q16832 855 aa18.55■□□□□ 0.56
SMG6-212ENST00000573153 GPR158Q5T848 1215 aa18.55■□□□□ 0.56
SMG6-212ENST00000573153 KRBA2Q6ZNG9 492 aa18.55■□□□□ 0.56
SMG6-212ENST00000573153 FRMD5Q7Z6J6 570 aa18.55■□□□□ 0.56
SMG6-212ENST00000573153 FSIP1Q8NA03 581 aa18.55■□□□□ 0.56
SMG6-212ENST00000573153 PARD3BQ8TEW8 1205 aa18.55■□□□□ 0.56
SMG6-212ENST00000573153 CHFRQ96EP1 664 aa18.55■□□□□ 0.56
SMG6-212ENST00000573153 SHDQ96IW2 340 aa18.55■□□□□ 0.56
SMG6-212ENST00000573153 MYRFLQ96LU7 910 aa18.55■□□□□ 0.56
SMG6-212ENST00000573153 TASP1Q9H6P5 420 aa18.55■□□□□ 0.56
SMG6-212ENST00000573153 VRTNQ9H8Y1 702 aa18.55■□□□□ 0.56
SMG6-212ENST00000573153 PRR23AA6NEV1 266 aa18.54■□□□□ 0.56
SMG6-212ENST00000573153 TACC1O75410 805 aa18.54■□□□□ 0.56
SMG6-212ENST00000573153 C4BPAP04003 597 aaKnown RBP18.54■□□□□ 0.56
SMG6-212ENST00000573153 RPN1P04843 607 aaKnown RBP18.54■□□□□ 0.56
SMG6-212ENST00000573153 LHX1P48742 406 aa18.54■□□□□ 0.56
SMG6-212ENST00000573153 MCCD1P59942 119 aaPredicted RBP18.54■□□□□ 0.56
SMG6-212ENST00000573153 MYL6P60660 151 aa18.54■□□□□ 0.56
SMG6-212ENST00000573153 MYL7Q01449 175 aa18.54■□□□□ 0.56
SMG6-212ENST00000573153 ZCWPW2Q504Y3 356 aa18.54■□□□□ 0.56
SMG6-212ENST00000573153 MYLPFQ96A32 169 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms