RNA–Protein interactions for RNA: ENST00000572756.5

NDE1-205, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 5

Gene NDE1, Length 915 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-205ENST00000572756 ASB16Q96NS5 453 aa17.29■□□□□ 0.36
NDE1-205ENST00000572756 KXD1Q9BQD3 176 aa17.29■□□□□ 0.36
NDE1-205ENST00000572756 CDH9Q9ULB4 789 aa17.29■□□□□ 0.36
NDE1-205ENST00000572756 A0A1W2PRU2 124 aa17.28■□□□□ 0.36
NDE1-205ENST00000572756 MYBPHLA2RUH7 354 aa17.28■□□□□ 0.36
NDE1-205ENST00000572756 IKBKBO14920 756 aa17.28■□□□□ 0.36
NDE1-205ENST00000572756 ATP2C2O75185 946 aa17.28■□□□□ 0.36
NDE1-205ENST00000572756 SMC2O95347 1197 aa17.28■□□□□ 0.36
NDE1-205ENST00000572756 AVPR2P30518 371 aa17.28■□□□□ 0.36
NDE1-205ENST00000572756 PRCPP42785 496 aa17.28■□□□□ 0.36
NDE1-205ENST00000572756 GPC5P78333 572 aa17.28■□□□□ 0.36
NDE1-205ENST00000572756 ENPEPQ07075 957 aa17.28■□□□□ 0.36
NDE1-205ENST00000572756 NCOA4Q13772 614 aa17.28■□□□□ 0.36
NDE1-205ENST00000572756 VEPH1Q14D04 833 aa17.28■□□□□ 0.36
NDE1-205ENST00000572756 WDR72Q3MJ13 1102 aa17.28■□□□□ 0.36
NDE1-205ENST00000572756 CFAP221Q4G0U5 840 aa17.28■□□□□ 0.36
NDE1-205ENST00000572756 CWF19L1Q69YN2 538 aaKnown RBP17.28■□□□□ 0.36
NDE1-205ENST00000572756 SIX5Q8N196 739 aa17.28■□□□□ 0.36
NDE1-205ENST00000572756 GPR152Q8TDT2 470 aa17.28■□□□□ 0.36
NDE1-205ENST00000572756 ELSPBP1Q96BH3 223 aa17.28■□□□□ 0.36
NDE1-205ENST00000572756 MMS19Q96T76 1030 aa17.28■□□□□ 0.36
NDE1-205ENST00000572756 SYT15Q9BQS2 421 aa17.28■□□□□ 0.36
NDE1-205ENST00000572756 MRPL45Q9BRJ2 306 aaKnown RBP17.28■□□□□ 0.36
NDE1-205ENST00000572756 PI4K2AQ9BTU6 479 aa17.28■□□□□ 0.36
NDE1-205ENST00000572756 MKNK1Q9BUB5 465 aa17.28■□□□□ 0.36
NDE1-205ENST00000572756 PLA2G2FQ9BZM2 168 aa17.28■□□□□ 0.36
NDE1-205ENST00000572756 TRPV4Q9HBA0 871 aa17.28■□□□□ 0.36
NDE1-205ENST00000572756 IL21Q9HBE4 155 aa17.28■□□□□ 0.36
NDE1-205ENST00000572756 CRTAC1Q9NQ79 661 aa17.28■□□□□ 0.36
NDE1-205ENST00000572756 CHMP5Q9NZZ3 219 aa17.28■□□□□ 0.36
NDE1-205ENST00000572756 FBXL21Q9UKT6 434 aa17.28■□□□□ 0.36
NDE1-205ENST00000572756 PHACTR2O75167 634 aa17.27■□□□□ 0.36
NDE1-205ENST00000572756 FGF19O95750 216 aa17.27■□□□□ 0.36
NDE1-205ENST00000572756 HMGA1P17096 107 aaKnown RBP17.27■□□□□ 0.36
NDE1-205ENST00000572756 CYP2F1P24903 491 aa17.27■□□□□ 0.36
NDE1-205ENST00000572756 RPL13P26373 211 aaKnown RBP17.27■□□□□ 0.36
NDE1-205ENST00000572756 GPR15P49685 360 aa17.27■□□□□ 0.36
NDE1-205ENST00000572756 VAMP7P51809 220 aa17.27■□□□□ 0.36
NDE1-205ENST00000572756 TNNC1P63316 161 aa17.27■□□□□ 0.36
NDE1-205ENST00000572756 ADAM9Q13443 819 aa17.27■□□□□ 0.36
NDE1-205ENST00000572756 BIRC3Q13489 604 aa17.27■□□□□ 0.36
NDE1-205ENST00000572756 IER5LQ5T953 404 aa17.27■□□□□ 0.36
NDE1-205ENST00000572756 INTS8Q75QN2 995 aaKnown RBP17.27■□□□□ 0.36
NDE1-205ENST00000572756 SV2AQ7L0J3 742 aa17.27■□□□□ 0.36
NDE1-205ENST00000572756 GIPC2Q8TF65 315 aa17.27■□□□□ 0.36
NDE1-205ENST00000572756 SMARCD2Q92925 531 aa17.27■□□□□ 0.36
NDE1-205ENST00000572756 SMARCE1Q969G3 411 aa17.27■□□□□ 0.36
NDE1-205ENST00000572756 FUBP3Q96I24 572 aaKnown RBP eCLIP17.27■□□□□ 0.36
NDE1-205ENST00000572756 GPR88Q9GZN0 384 aa17.27■□□□□ 0.36
NDE1-205ENST00000572756 HOOK1Q9UJC3 728 aaKnown RBP17.27■□□□□ 0.36
NDE1-205ENST00000572756 COL4A2P08572 1712 aa17.27■□□□□ 0.35
NDE1-205ENST00000572756 NCANO14594 1321 aa17.26■□□□□ 0.35
NDE1-205ENST00000572756 PDGFRBP09619 1106 aa17.26■□□□□ 0.35
NDE1-205ENST00000572756 GABRR2P28476 465 aa17.26■□□□□ 0.35
NDE1-205ENST00000572756 PSMC2P35998 433 aaKnown RBP17.26■□□□□ 0.35
NDE1-205ENST00000572756 GNL1P36915 607 aaPredicted RBP17.26■□□□□ 0.35
NDE1-205ENST00000572756 MAGEA11P43364 429 aa17.26■□□□□ 0.35
NDE1-205ENST00000572756 CLCN5P51795 746 aa17.26■□□□□ 0.35
NDE1-205ENST00000572756 PSMC1P62191 440 aaKnown RBP17.26■□□□□ 0.35
NDE1-205ENST00000572756 ZNF699Q32M78 642 aa17.26■□□□□ 0.35
NDE1-205ENST00000572756 STXBP5Q5T5C0 1151 aa17.26■□□□□ 0.35
NDE1-205ENST00000572756 ASTLQ6HA08 431 aaPredicted RBP17.26■□□□□ 0.35
NDE1-205ENST00000572756 ZC3H3Q8IXZ2 948 aaKnown RBP17.26■□□□□ 0.35
NDE1-205ENST00000572756 FAM186BQ8IYM0 893 aa17.26■□□□□ 0.35
NDE1-205ENST00000572756 TMEM105Q8N8V8 129 aa17.26■□□□□ 0.35
NDE1-205ENST00000572756 ZSCAN18Q8TBC5 510 aaPredicted RBP17.26■□□□□ 0.35
NDE1-205ENST00000572756 FAM200AQ8TCP9 573 aa17.26■□□□□ 0.35
NDE1-205ENST00000572756 GTPBP4Q9BZE4 634 aaKnown RBP17.26■□□□□ 0.35
NDE1-205ENST00000572756 MFSD1Q9H3U5 465 aa17.26■□□□□ 0.35
NDE1-205ENST00000572756 ZFP14Q9HCL3 533 aa17.26■□□□□ 0.35
NDE1-205ENST00000572756 NXF1Q9UBU9 619 aaKnown RBP17.26■□□□□ 0.35
NDE1-205ENST00000572756 CA14Q9ULX7 337 aa17.26■□□□□ 0.35
NDE1-205ENST00000572756 CACNA1HO95180 2353 aa17.26■□□□□ 0.35
NDE1-205ENST00000572756 ANAPC1Q9H1A4 1944 aa17.25■□□□□ 0.35
NDE1-205ENST00000572756 KINO60870 393 aaKnown RBP17.25■□□□□ 0.35
NDE1-205ENST00000572756 TRIM49P0CI25 452 aa17.25■□□□□ 0.35
NDE1-205ENST00000572756 TRIM49CP0CI26 452 aa17.25■□□□□ 0.35
NDE1-205ENST00000572756 PPP3CAQ08209 521 aa17.25■□□□□ 0.35
NDE1-205ENST00000572756 MAPRE1Q15691 268 aaKnown RBP17.25■□□□□ 0.35
NDE1-205ENST00000572756 DDR2Q16832 855 aa17.25■□□□□ 0.35
NDE1-205ENST00000572756 SDHAF4Q5VUM1 108 aa17.25■□□□□ 0.35
NDE1-205ENST00000572756 C4orf50Q6ZRC1 276 aa17.25■□□□□ 0.35
NDE1-205ENST00000572756 TMEM150AQ86TG1 271 aa17.25■□□□□ 0.35
NDE1-205ENST00000572756 SPATA2LQ8IUW3 424 aaPredicted RBP17.25■□□□□ 0.35
NDE1-205ENST00000572756 ADSSL1Q8N142 457 aa17.25■□□□□ 0.35
NDE1-205ENST00000572756 MYLPFQ96A32 169 aa17.25■□□□□ 0.35
NDE1-205ENST00000572756 ELMO3Q96BJ8 720 aa17.25■□□□□ 0.35
NDE1-205ENST00000572756 SNX25Q9H3E2 840 aa17.25■□□□□ 0.35
NDE1-205ENST00000572756 SMYD3Q9H7B4 428 aa17.25■□□□□ 0.35
NDE1-205ENST00000572756 ARHGEF3Q9NR81 526 aa17.25■□□□□ 0.35
NDE1-205ENST00000572756 ZNF638Q14966 1978 aaKnown RBP17.25■□□□□ 0.35
NDE1-205ENST00000572756 COL4A3Q01955 1670 aa17.24■□□□□ 0.35
NDE1-205ENST00000572756 NOL4O94818 638 aa17.24■□□□□ 0.35
NDE1-205ENST00000572756 ASS1P00966 412 aaKnown RBP17.24■□□□□ 0.35
NDE1-205ENST00000572756 HLA-DRAP01903 254 aa17.24■□□□□ 0.35
NDE1-205ENST00000572756 F11P03951 625 aa17.24■□□□□ 0.35
NDE1-205ENST00000572756 CSH1P0DML2 217 aa17.24■□□□□ 0.35
NDE1-205ENST00000572756 CSH2P0DML3 217 aa17.24■□□□□ 0.35
NDE1-205ENST00000572756 AOC1P19801 751 aa17.24■□□□□ 0.35
NDE1-205ENST00000572756 CDC25CP30307 473 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms