RNA–Protein interactions for RNA: ENST00000571409.1

CTDNEP1-206, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-206ENST00000571409 HEPACAM2A8MVW5 462 aa32.53■■■□□ 2.8
CTDNEP1-206ENST00000571409 LRRN2O75325 713 aa32.53■■■□□ 2.8
CTDNEP1-206ENST00000571409 CST3P01034 146 aaPredicted RBP32.53■■■□□ 2.8
CTDNEP1-206ENST00000571409 CD72P21854 359 aa32.53■■■□□ 2.8
CTDNEP1-206ENST00000571409 GDI1P31150 447 aa32.53■■■□□ 2.8
CTDNEP1-206ENST00000571409 UBXN2BQ14CS0 331 aa32.53■■■□□ 2.8
CTDNEP1-206ENST00000571409 GPR158Q5T848 1215 aa32.53■■■□□ 2.8
CTDNEP1-206ENST00000571409 LIMS2Q7Z4I7 341 aa32.53■■■□□ 2.8
CTDNEP1-206ENST00000571409 MFSD6LQ8IWD5 586 aa32.53■■■□□ 2.8
CTDNEP1-206ENST00000571409 KBTBD7Q8WVZ9 684 aa32.53■■■□□ 2.8
CTDNEP1-206ENST00000571409 IRF7Q92985 503 aa32.53■■■□□ 2.8
CTDNEP1-206ENST00000571409 E2F7Q96AV8 911 aa32.53■■■□□ 2.8
CTDNEP1-206ENST00000571409 GCNAQ96QF7 691 aa32.53■■■□□ 2.8
CTDNEP1-206ENST00000571409 GZF1Q9H116 711 aaPredicted RBP32.53■■■□□ 2.8
CTDNEP1-206ENST00000571409 IL21Q9HBE4 155 aa32.53■■■□□ 2.8
CTDNEP1-206ENST00000571409 GDPD2Q9HCC8 539 aa32.53■■■□□ 2.8
CTDNEP1-206ENST00000571409 MIA3Q5JRA6 1907 aa32.53■■■□□ 2.8
CTDNEP1-206ENST00000571409 RPN1P04843 607 aaKnown RBP32.52■■■□□ 2.8
CTDNEP1-206ENST00000571409 PRR29P0C7W0 189 aa32.52■■■□□ 2.8
CTDNEP1-206ENST00000571409 CDC25CP30307 473 aa32.52■■■□□ 2.8
CTDNEP1-206ENST00000571409 GPR15P49685 360 aa32.52■■■□□ 2.8
CTDNEP1-206ENST00000571409 CYP4F8P98187 520 aa32.52■■■□□ 2.8
CTDNEP1-206ENST00000571409 CCDC142Q17RM4 750 aa32.52■■■□□ 2.8
CTDNEP1-206ENST00000571409 GPIHBP1Q8IV16 184 aa32.52■■■□□ 2.8
CTDNEP1-206ENST00000571409 ZNF516Q92618 1163 aa32.52■■■□□ 2.8
CTDNEP1-206ENST00000571409 MMS19Q96T76 1030 aa32.52■■■□□ 2.8
CTDNEP1-206ENST00000571409 GOLPH3LQ9H4A5 285 aa32.52■■■□□ 2.8
CTDNEP1-206ENST00000571409 ABCB6Q9NP58 842 aa32.52■■■□□ 2.8
CTDNEP1-206ENST00000571409 MTF2Q9Y483 593 aaPredicted RBP32.52■■■□□ 2.8
CTDNEP1-206ENST00000571409 NUP210Q8TEM1 1887 aaPredicted RBP32.51■■■□□ 2.79
CTDNEP1-206ENST00000571409 GLULP15104 373 aa32.51■■■□□ 2.79
CTDNEP1-206ENST00000571409 CYP2F1P24903 491 aa32.51■■■□□ 2.79
CTDNEP1-206ENST00000571409 ARID3BQ8IVW6 561 aaPredicted RBP32.51■■■□□ 2.79
CTDNEP1-206ENST00000571409 RSPRY1Q96DX4 576 aa32.51■■■□□ 2.79
CTDNEP1-206ENST00000571409 KCTD10Q9H3F6 313 aa32.51■■■□□ 2.79
CTDNEP1-206ENST00000571409 LTB4R2Q9NPC1 389 aa32.51■■■□□ 2.79
CTDNEP1-206ENST00000571409 COL4A2P08572 1712 aa32.51■■■□□ 2.79
CTDNEP1-206ENST00000571409 CASP4P49662 377 aa32.5■■■□□ 2.79
CTDNEP1-206ENST00000571409 SPATA2LQ8IUW3 424 aaPredicted RBP32.5■■■□□ 2.79
CTDNEP1-206ENST00000571409 STKLD1Q8NE28 680 aa32.5■■■□□ 2.79
CTDNEP1-206ENST00000571409 SYT15Q9BQS2 421 aa32.5■■■□□ 2.79
CTDNEP1-206ENST00000571409 TICRRQ7Z2Z1 1910 aa32.49■■■□□ 2.79
CTDNEP1-206ENST00000571409 MYBPHLA2RUH7 354 aa32.49■■■□□ 2.79
CTDNEP1-206ENST00000571409 FAM170BA6NMN3 283 aa32.49■■■□□ 2.79
CTDNEP1-206ENST00000571409 ZNF263O14978 683 aa32.49■■■□□ 2.79
CTDNEP1-206ENST00000571409 HMGA1P17096 107 aaKnown RBP32.49■■■□□ 2.79
CTDNEP1-206ENST00000571409 LMO2P25791 158 aa32.49■■■□□ 2.79
CTDNEP1-206ENST00000571409 RPL10AP62906 217 aaKnown RBP32.49■■■□□ 2.79
CTDNEP1-206ENST00000571409 DDR2Q16832 855 aa32.49■■■□□ 2.79
CTDNEP1-206ENST00000571409 SDHAF4Q5VUM1 108 aa32.49■■■□□ 2.79
CTDNEP1-206ENST00000571409 KRBA2Q6ZNG9 492 aa32.49■■■□□ 2.79
CTDNEP1-206ENST00000571409 YAF2Q8IY57 180 aa32.49■■■□□ 2.79
CTDNEP1-206ENST00000571409 PLEKHO2Q8TD55 490 aa32.49■■■□□ 2.79
CTDNEP1-206ENST00000571409 CCDC47Q96A33 483 aaKnown RBP32.49■■■□□ 2.79
CTDNEP1-206ENST00000571409 OSBPL6Q9BZF3 934 aa32.49■■■□□ 2.79
CTDNEP1-206ENST00000571409 TASP1Q9H6P5 420 aa32.49■■■□□ 2.79
CTDNEP1-206ENST00000571409 DMAC2Q9NW81 257 aa32.49■■■□□ 2.79
CTDNEP1-206ENST00000571409 CDH9Q9ULB4 789 aa32.49■■■□□ 2.79
CTDNEP1-206ENST00000571409 PDXKO00764 312 aa32.48■■■□□ 2.79
CTDNEP1-206ENST00000571409 ATP2C2O75185 946 aa32.48■■■□□ 2.79
CTDNEP1-206ENST00000571409 CSH1P0DML2 217 aa32.48■■■□□ 2.79
CTDNEP1-206ENST00000571409 CSH2P0DML3 217 aa32.48■■■□□ 2.79
CTDNEP1-206ENST00000571409 WARSP23381 471 aaKnown RBP32.48■■■□□ 2.79
CTDNEP1-206ENST00000571409 NBL1P41271 181 aa32.48■■■□□ 2.79
CTDNEP1-206ENST00000571409 PSMC1P62191 440 aaKnown RBP32.48■■■□□ 2.79
CTDNEP1-206ENST00000571409 TRPC3Q13507 836 aa32.48■■■□□ 2.79
CTDNEP1-206ENST00000571409 FAM171BQ6P995 826 aa32.48■■■□□ 2.79
CTDNEP1-206ENST00000571409 ZNF852Q6ZMS4 543 aa32.48■■■□□ 2.79
CTDNEP1-206ENST00000571409 SLC9A9Q8IVB4 645 aa32.48■■■□□ 2.79
CTDNEP1-206ENST00000571409 TRPV5Q9NQA5 729 aa32.48■■■□□ 2.79
CTDNEP1-206ENST00000571409 MAGED2Q9UNF1 606 aaPredicted RBP32.48■■■□□ 2.79
CTDNEP1-206ENST00000571409 CACNA1HO95180 2353 aa32.48■■■□□ 2.79
CTDNEP1-206ENST00000571409 DPYSL4O14531 572 aa32.47■■■□□ 2.79
CTDNEP1-206ENST00000571409 TARSP26639 723 aaKnown RBP32.47■■■□□ 2.79
CTDNEP1-206ENST00000571409 DPYDQ12882 1025 aa32.47■■■□□ 2.79
CTDNEP1-206ENST00000571409 WDR72Q3MJ13 1102 aa32.47■■■□□ 2.79
CTDNEP1-206ENST00000571409 CFAP221Q4G0U5 840 aa32.47■■■□□ 2.79
CTDNEP1-206ENST00000571409 FUBP3Q96I24 572 aaKnown RBP eCLIP32.47■■■□□ 2.79
CTDNEP1-206ENST00000571409 BCO2Q9BYV7 579 aa32.47■■■□□ 2.79
CTDNEP1-206ENST00000571409 PIEZO1Q92508 2521 aa32.46■■■□□ 2.79
CTDNEP1-206ENST00000571409 SHISA7A6NL88 538 aa32.46■■■□□ 2.79
CTDNEP1-206ENST00000571409 LRRIQ3A6PVS8 624 aaPredicted RBP32.46■■■□□ 2.79
CTDNEP1-206ENST00000571409 PROB1E7EW31 1015 aa32.46■■■□□ 2.79
CTDNEP1-206ENST00000571409 PHACTR2O75167 634 aa32.46■■■□□ 2.79
CTDNEP1-206ENST00000571409 RHOBTB3O94955 611 aa32.46■■■□□ 2.79
CTDNEP1-206ENST00000571409 ZNF202O95125 648 aa32.46■■■□□ 2.79
CTDNEP1-206ENST00000571409 F11P03951 625 aa32.46■■■□□ 2.79
CTDNEP1-206ENST00000571409 NR3C1P04150 777 aa32.46■■■□□ 2.79
CTDNEP1-206ENST00000571409 PDGFRBP09619 1106 aa32.46■■■□□ 2.79
CTDNEP1-206ENST00000571409 NLRP12P59046 1061 aa32.46■■■□□ 2.79
CTDNEP1-206ENST00000571409 MYL6P60660 151 aa32.46■■■□□ 2.79
CTDNEP1-206ENST00000571409 TNNC1P63316 161 aa32.46■■■□□ 2.79
CTDNEP1-206ENST00000571409 FCHO2Q0JRZ9 810 aa32.46■■■□□ 2.79
CTDNEP1-206ENST00000571409 C4orf50Q6ZRC1 276 aa32.46■■■□□ 2.79
CTDNEP1-206ENST00000571409 TMEM150AQ86TG1 271 aa32.46■■■□□ 2.79
CTDNEP1-206ENST00000571409 C1orf210Q8IVY1 113 aa32.46■■■□□ 2.79
CTDNEP1-206ENST00000571409 PARD3BQ8TEW8 1205 aa32.46■■■□□ 2.79
CTDNEP1-206ENST00000571409 TMEM174Q8WUU8 243 aa32.46■■■□□ 2.79
CTDNEP1-206ENST00000571409 NELL2Q99435 816 aa32.46■■■□□ 2.79
CTDNEP1-206ENST00000571409 MRPL45Q9BRJ2 306 aaKnown RBP32.46■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms