RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 IER2Q9BTL4 223 aa18.35■□□□□ 0.53
MAP1LC3B-208ENST00000570189 BCO2Q9BYV7 579 aa18.35■□□□□ 0.53
MAP1LC3B-208ENST00000570189 HEBP1Q9NRV9 189 aa18.35■□□□□ 0.53
MAP1LC3B-208ENST00000570189 TMLHEQ9NVH6 421 aa18.35■□□□□ 0.53
MAP1LC3B-208ENST00000570189 DDX43Q9NXZ2 648 aaKnown RBP18.35■□□□□ 0.53
MAP1LC3B-208ENST00000570189 ZDHHC9Q9Y397 364 aa18.35■□□□□ 0.53
MAP1LC3B-208ENST00000570189 GTF3C3Q9Y5Q9 886 aa18.35■□□□□ 0.53
MAP1LC3B-208ENST00000570189 SNX9Q9Y5X1 595 aa18.35■□□□□ 0.53
MAP1LC3B-208ENST00000570189 FAM170BA6NMN3 283 aa18.34■□□□□ 0.53
MAP1LC3B-208ENST00000570189 HEPACAM2A8MVW5 462 aa18.34■□□□□ 0.53
MAP1LC3B-208ENST00000570189 STAU1O95793 577 aaKnown RBP18.34■□□□□ 0.53
MAP1LC3B-208ENST00000570189 HMGA1P17096 107 aaKnown RBP18.34■□□□□ 0.53
MAP1LC3B-208ENST00000570189 DDX6P26196 483 aaKnown RBP eCLIP18.34■□□□□ 0.53
MAP1LC3B-208ENST00000570189 KRT85P78386 507 aa18.34■□□□□ 0.53
MAP1LC3B-208ENST00000570189 CYP24A1Q07973 514 aa18.34■□□□□ 0.53
MAP1LC3B-208ENST00000570189 FZD5Q13467 585 aa18.34■□□□□ 0.53
MAP1LC3B-208ENST00000570189 GRM2Q14416 872 aa18.34■□□□□ 0.53
MAP1LC3B-208ENST00000570189 SCARA3Q6AZY7 606 aa18.34■□□□□ 0.53
MAP1LC3B-208ENST00000570189 FAM171BQ6P995 826 aa18.34■□□□□ 0.53
MAP1LC3B-208ENST00000570189 ARID3BQ8IVW6 561 aaPredicted RBP18.34■□□□□ 0.53
MAP1LC3B-208ENST00000570189 ADGRF2Q8IZF7 708 aa18.34■□□□□ 0.53
MAP1LC3B-208ENST00000570189 RSPRY1Q96DX4 576 aa18.34■□□□□ 0.53
MAP1LC3B-208ENST00000570189 TRMT2BQ96GJ1 504 aaKnown RBP18.34■□□□□ 0.53
MAP1LC3B-208ENST00000570189 HPDLQ96IR7 371 aa18.34■□□□□ 0.53
MAP1LC3B-208ENST00000570189 MYRFLQ96LU7 910 aa18.34■□□□□ 0.53
MAP1LC3B-208ENST00000570189 CEP295NLQ96MC4 621 aa18.34■□□□□ 0.53
MAP1LC3B-208ENST00000570189 CGRRF1Q99675 332 aa18.34■□□□□ 0.53
MAP1LC3B-208ENST00000570189 BLZF1Q9H2G9 400 aa18.34■□□□□ 0.53
MAP1LC3B-208ENST00000570189 ATXN3LQ9H3M9 355 aa18.34■□□□□ 0.53
MAP1LC3B-208ENST00000570189 SLITRK6Q9H5Y7 841 aa18.34■□□□□ 0.53
MAP1LC3B-208ENST00000570189 TASP1Q9H6P5 420 aa18.34■□□□□ 0.53
MAP1LC3B-208ENST00000570189 ABI2Q9NYB9 513 aaPredicted RBP18.34■□□□□ 0.53
MAP1LC3B-208ENST00000570189 FBXO4Q9UKT5 387 aa18.34■□□□□ 0.53
MAP1LC3B-208ENST00000570189 MTF2Q9Y483 593 aaPredicted RBP18.34■□□□□ 0.53
MAP1LC3B-208ENST00000570189 ZNF263O14978 683 aa18.33■□□□□ 0.52
MAP1LC3B-208ENST00000570189 KRT19P08727 400 aa18.33■□□□□ 0.52
MAP1LC3B-208ENST00000570189 CSH1P0DML2 217 aa18.33■□□□□ 0.52
MAP1LC3B-208ENST00000570189 CSH2P0DML3 217 aa18.33■□□□□ 0.52
MAP1LC3B-208ENST00000570189 TARSP26639 723 aaKnown RBP18.33■□□□□ 0.52
MAP1LC3B-208ENST00000570189 CASP1P29466 404 aa18.33■□□□□ 0.52
MAP1LC3B-208ENST00000570189 GDI1P31150 447 aa18.33■□□□□ 0.52
MAP1LC3B-208ENST00000570189 MAGEA11P43364 429 aa18.33■□□□□ 0.52
MAP1LC3B-208ENST00000570189 AFMP43652 599 aa18.33■□□□□ 0.52
MAP1LC3B-208ENST00000570189 RPL10AP62906 217 aaKnown RBP18.33■□□□□ 0.52
MAP1LC3B-208ENST00000570189 CLDN10P78369 228 aa18.33■□□□□ 0.52
MAP1LC3B-208ENST00000570189 UBXN2BQ14CS0 331 aa18.33■□□□□ 0.52
MAP1LC3B-208ENST00000570189 STXBP5Q5T5C0 1151 aa18.33■□□□□ 0.52
MAP1LC3B-208ENST00000570189 TRAPPC11Q7Z392 1133 aa18.33■□□□□ 0.52
MAP1LC3B-208ENST00000570189 FRMD5Q7Z6J6 570 aa18.33■□□□□ 0.52
MAP1LC3B-208ENST00000570189 OSTM1Q86WC4 334 aa18.33■□□□□ 0.52
MAP1LC3B-208ENST00000570189 SLC9A9Q8IVB4 645 aa18.33■□□□□ 0.52
MAP1LC3B-208ENST00000570189 MAML2Q8IZL2 1156 aaPredicted RBP18.33■□□□□ 0.52
MAP1LC3B-208ENST00000570189 KBTBD7Q8WVZ9 684 aa18.33■□□□□ 0.52
MAP1LC3B-208ENST00000570189 NKD2Q969F2 451 aaPredicted RBP18.33■□□□□ 0.52
MAP1LC3B-208ENST00000570189 PAGE5Q96GU1 130 aa18.33■□□□□ 0.52
MAP1LC3B-208ENST00000570189 FAM84AQ96KN4 292 aa18.33■□□□□ 0.52
MAP1LC3B-208ENST00000570189 GZF1Q9H116 711 aaPredicted RBP18.33■□□□□ 0.52
MAP1LC3B-208ENST00000570189 SLC39A2Q9NP94 309 aa18.33■□□□□ 0.52
MAP1LC3B-208ENST00000570189 SERTAD1Q9UHV2 236 aa18.33■□□□□ 0.52
MAP1LC3B-208ENST00000570189 R3HCC1Q9Y3T6 440 aaKnown RBP18.33■□□□□ 0.52
MAP1LC3B-208ENST00000570189 ATP6V1DQ9Y5K8 247 aa18.33■□□□□ 0.52
MAP1LC3B-208ENST00000570189 HELZP42694 1942 aaKnown RBP18.32■□□□□ 0.52
MAP1LC3B-208ENST00000570189 LRRN2O75325 713 aa18.32■□□□□ 0.52
MAP1LC3B-208ENST00000570189 F11P03951 625 aa18.32■□□□□ 0.52
MAP1LC3B-208ENST00000570189 PFKFB1P16118 471 aa18.32■□□□□ 0.52
MAP1LC3B-208ENST00000570189 WARSP23381 471 aaKnown RBP18.32■□□□□ 0.52
MAP1LC3B-208ENST00000570189 NLRP12P59046 1061 aa18.32■□□□□ 0.52
MAP1LC3B-208ENST00000570189 ARHGAP29Q52LW3 1261 aa18.32■□□□□ 0.52
MAP1LC3B-208ENST00000570189 GPR158Q5T848 1215 aa18.32■□□□□ 0.52
MAP1LC3B-208ENST00000570189 LMBRD2Q68DH5 695 aaPredicted RBP18.32■□□□□ 0.52
MAP1LC3B-208ENST00000570189 ZC3H14Q6PJT7 736 aaKnown RBP18.32■□□□□ 0.52
MAP1LC3B-208ENST00000570189 ASCL5Q7RTU5 278 aa18.32■□□□□ 0.52
MAP1LC3B-208ENST00000570189 TMEM150AQ86TG1 271 aa18.32■□□□□ 0.52
MAP1LC3B-208ENST00000570189 KIAA0895Q8NCT3 520 aa18.32■□□□□ 0.52
MAP1LC3B-208ENST00000570189 FAM200AQ8TCP9 573 aa18.32■□□□□ 0.52
MAP1LC3B-208ENST00000570189 NOC3LQ8WTT2 800 aaKnown RBP18.32■□□□□ 0.52
MAP1LC3B-208ENST00000570189 SPATA32Q96LK8 384 aa18.32■□□□□ 0.52
MAP1LC3B-208ENST00000570189 GCNAQ96QF7 691 aa18.32■□□□□ 0.52
MAP1LC3B-208ENST00000570189 FNBP1Q96RU3 617 aa18.32■□□□□ 0.52
MAP1LC3B-208ENST00000570189 SCAND2PQ9GZW5 306 aaPredicted RBP18.32■□□□□ 0.52
MAP1LC3B-208ENST00000570189 DMAC2Q9NW81 257 aa18.32■□□□□ 0.52
MAP1LC3B-208ENST00000570189 UXTQ9UBK9 157 aaPredicted RBP18.32■□□□□ 0.52
MAP1LC3B-208ENST00000570189 CDH9Q9ULB4 789 aa18.32■□□□□ 0.52
MAP1LC3B-208ENST00000570189 CLIC2O15247 247 aa18.31■□□□□ 0.52
MAP1LC3B-208ENST00000570189 TACC1O75410 805 aa18.31■□□□□ 0.52
MAP1LC3B-208ENST00000570189 NOL4O94818 638 aa18.31■□□□□ 0.52
MAP1LC3B-208ENST00000570189 SP9P0CG40 484 aa18.31■□□□□ 0.52
MAP1LC3B-208ENST00000570189 AP3M2P53677 418 aa18.31■□□□□ 0.52
MAP1LC3B-208ENST00000570189 PLCB2Q00722 1185 aa18.31■□□□□ 0.52
MAP1LC3B-208ENST00000570189 MAPRE1Q15691 268 aaKnown RBP18.31■□□□□ 0.52
MAP1LC3B-208ENST00000570189 NELFCDQ8IXH7 590 aa18.31■□□□□ 0.52
MAP1LC3B-208ENST00000570189 SPRYD3Q8NCJ5 442 aa18.31■□□□□ 0.52
MAP1LC3B-208ENST00000570189 NELL1Q92832 810 aa18.31■□□□□ 0.52
MAP1LC3B-208ENST00000570189 C8orf33Q9H7E9 229 aaPredicted RBP18.31■□□□□ 0.52
MAP1LC3B-208ENST00000570189 VRTNQ9H8Y1 702 aa18.31■□□□□ 0.52
MAP1LC3B-208ENST00000570189 PIAS3Q9Y6X2 628 aa18.31■□□□□ 0.52
MAP1LC3B-208ENST00000570189 PTPRZ1P23471 2315 aaPredicted RBP18.31■□□□□ 0.52
MAP1LC3B-208ENST00000570189 A0A1B0GVL5 298 aa18.3■□□□□ 0.52
MAP1LC3B-208ENST00000570189 A0A1W2PQ27 194 aa18.3■□□□□ 0.52
MAP1LC3B-208ENST00000570189 A0A1W2PQ64 194 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms