RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 KLF8O95600 359 aaPredicted RBP7.28□□□□□ -1.24
HERPUD1-217ENST00000569429 SFTPCP11686 197 aa7.28□□□□□ -1.24
HERPUD1-217ENST00000569429 MAOBP27338 520 aa7.28□□□□□ -1.24
HERPUD1-217ENST00000569429 CDC25CP30307 473 aa7.28□□□□□ -1.24
HERPUD1-217ENST00000569429 OPRD1P41143 372 aa7.28□□□□□ -1.24
HERPUD1-217ENST00000569429 ALDH1A3P47895 512 aa7.28□□□□□ -1.24
HERPUD1-217ENST00000569429 CLK2P49760 499 aaKnown RBP7.28□□□□□ -1.24
HERPUD1-217ENST00000569429 GNAQP50148 359 aa7.28□□□□□ -1.24
HERPUD1-217ENST00000569429 FOXK1P85037 733 aa7.28□□□□□ -1.24
HERPUD1-217ENST00000569429 CYP4F8P98187 520 aa7.28□□□□□ -1.24
HERPUD1-217ENST00000569429 PTH1RQ03431 593 aa7.28□□□□□ -1.24
HERPUD1-217ENST00000569429 POU5F1BQ06416 359 aa7.28□□□□□ -1.24
HERPUD1-217ENST00000569429 BFSP1Q12934 665 aa7.28□□□□□ -1.24
HERPUD1-217ENST00000569429 NR1H3Q13133 447 aa7.28□□□□□ -1.24
HERPUD1-217ENST00000569429 IMMTQ16891 758 aaKnown RBP7.28□□□□□ -1.24
HERPUD1-217ENST00000569429 LINC00303Q3SY05 128 aa7.28□□□□□ -1.24
HERPUD1-217ENST00000569429 CTXN3Q4LDR2 81 aa7.28□□□□□ -1.24
HERPUD1-217ENST00000569429 ZNF280DQ6N043 979 aa7.28□□□□□ -1.24
HERPUD1-217ENST00000569429 ANO5Q75V66 913 aa7.28□□□□□ -1.24
HERPUD1-217ENST00000569429 FERMT3Q86UX7 667 aa7.28□□□□□ -1.24
HERPUD1-217ENST00000569429 SRBD1Q8N5C6 995 aaKnown RBP7.28□□□□□ -1.24
HERPUD1-217ENST00000569429 CTCFLQ8NI51 663 aaPredicted RBP7.28□□□□□ -1.24
HERPUD1-217ENST00000569429 RIN3Q8TB24 985 aa7.28□□□□□ -1.24
HERPUD1-217ENST00000569429 ATP2A3Q93084 1043 aa7.28□□□□□ -1.24
HERPUD1-217ENST00000569429 TMEM143Q96AN5 459 aa7.28□□□□□ -1.24
HERPUD1-217ENST00000569429 CXCL16Q9H2A7 254 aa7.28□□□□□ -1.24
HERPUD1-217ENST00000569429 TDP1Q9NUW8 608 aa7.28□□□□□ -1.24
HERPUD1-217ENST00000569429 FTSJ1Q9UET6 329 aa7.28□□□□□ -1.24
HERPUD1-217ENST00000569429 PPME1Q9Y570 386 aa7.28□□□□□ -1.24
HERPUD1-217ENST00000569429 DDX11L8A8MPP1 907 aa7.27□□□□□ -1.25
HERPUD1-217ENST00000569429 INO80B-WBP1J3KQ70 363 aa7.27□□□□□ -1.25
HERPUD1-217ENST00000569429 TBX3O15119 743 aa7.27□□□□□ -1.25
HERPUD1-217ENST00000569429 PAPSS1O43252 624 aaPredicted RBP7.27□□□□□ -1.25
HERPUD1-217ENST00000569429 RFPL3O75679 317 aa7.27□□□□□ -1.25
HERPUD1-217ENST00000569429 DXOO77932 396 aaKnown RBP7.27□□□□□ -1.25
HERPUD1-217ENST00000569429 GABRG2P18507 467 aa7.27□□□□□ -1.25
HERPUD1-217ENST00000569429 NDUFV2P19404 249 aa7.27□□□□□ -1.25
HERPUD1-217ENST00000569429 DDX6P26196 483 aaKnown RBP eCLIP7.27□□□□□ -1.25
HERPUD1-217ENST00000569429 TIE1P35590 1138 aa7.27□□□□□ -1.25
HERPUD1-217ENST00000569429 AVPR1AP37288 418 aa7.27□□□□□ -1.25
HERPUD1-217ENST00000569429 KIR2DL1P43626 348 aaPredicted RBP7.27□□□□□ -1.25
HERPUD1-217ENST00000569429 AFMP43652 599 aa7.27□□□□□ -1.25
HERPUD1-217ENST00000569429 ERVPABLB-1P60509 514 aa7.27□□□□□ -1.25
HERPUD1-217ENST00000569429 MBTD1Q05BQ5 628 aa7.27□□□□□ -1.25
HERPUD1-217ENST00000569429 NMIQ13287 307 aaPredicted RBP7.27□□□□□ -1.25
HERPUD1-217ENST00000569429 ZNF268Q14587 947 aaPredicted RBP7.27□□□□□ -1.25
HERPUD1-217ENST00000569429 MTF1Q14872 753 aa7.27□□□□□ -1.25
HERPUD1-217ENST00000569429 SF3A1Q15459 793 aaKnown RBP7.27□□□□□ -1.25
HERPUD1-217ENST00000569429 EML3Q32P44 896 aa7.27□□□□□ -1.25
HERPUD1-217ENST00000569429 INAVAQ3KP66 663 aa7.27□□□□□ -1.25
HERPUD1-217ENST00000569429 ITIH5Q86UX2 942 aa7.27□□□□□ -1.25
HERPUD1-217ENST00000569429 SGMS1Q86VZ5 419 aa7.27□□□□□ -1.25
HERPUD1-217ENST00000569429 LSMEM2Q8N112 164 aa7.27□□□□□ -1.25
HERPUD1-217ENST00000569429 ZCCHC9Q8N567 271 aaKnown RBP7.27□□□□□ -1.25
HERPUD1-217ENST00000569429 OSCP1Q8WVF1 389 aa7.27□□□□□ -1.25
HERPUD1-217ENST00000569429 TCP11Q8WWU5 503 aa7.27□□□□□ -1.25
HERPUD1-217ENST00000569429 SPOCK2Q92563 424 aa7.27□□□□□ -1.25
HERPUD1-217ENST00000569429 CRISPLD1Q9H336 500 aa7.27□□□□□ -1.25
HERPUD1-217ENST00000569429 DCTPP1Q9H773 170 aa7.27□□□□□ -1.25
HERPUD1-217ENST00000569429 IL21Q9HBE4 155 aa7.27□□□□□ -1.25
HERPUD1-217ENST00000569429 DUS2Q9NX74 493 aaKnown RBP7.27□□□□□ -1.25
HERPUD1-217ENST00000569429 CALCOCO1Q9P1Z2 691 aa7.27□□□□□ -1.25
HERPUD1-217ENST00000569429 DDX19BQ9UMR2 479 aa7.27□□□□□ -1.25
HERPUD1-217ENST00000569429 PHLPP2Q6ZVD8 1323 aa7.27□□□□□ -1.25
HERPUD1-217ENST00000569429 A0A0A0MRY4 1105 aa7.26□□□□□ -1.25
HERPUD1-217ENST00000569429 ENC1O14682 589 aa7.26□□□□□ -1.25
HERPUD1-217ENST00000569429 BCAT2O15382 392 aaPredicted RBP7.26□□□□□ -1.25
HERPUD1-217ENST00000569429 B4GALT5O43286 388 aa7.26□□□□□ -1.25
HERPUD1-217ENST00000569429 NDUFS2O75306 463 aa7.26□□□□□ -1.25
HERPUD1-217ENST00000569429 DDAH1O94760 285 aa7.26□□□□□ -1.25
HERPUD1-217ENST00000569429 PLEKHA8P1O95397 391 aa7.26□□□□□ -1.25
HERPUD1-217ENST00000569429 CPB1P15086 417 aa7.26□□□□□ -1.25
HERPUD1-217ENST00000569429 CIITAP33076 1130 aa7.26□□□□□ -1.25
HERPUD1-217ENST00000569429 INHBCP55103 352 aa7.26□□□□□ -1.25
HERPUD1-217ENST00000569429 DUSP4Q13115 394 aa7.26□□□□□ -1.25
HERPUD1-217ENST00000569429 MXD4Q14582 209 aaPredicted RBP7.26□□□□□ -1.25
HERPUD1-217ENST00000569429 PRR16Q569H4 304 aa7.26□□□□□ -1.25
HERPUD1-217ENST00000569429 TYW1BQ6NUM6 668 aa7.26□□□□□ -1.25
HERPUD1-217ENST00000569429 PPP1R18Q6NYC8 613 aa7.26□□□□□ -1.25
HERPUD1-217ENST00000569429 HEATR3Q7Z4Q2 680 aa7.26□□□□□ -1.25
HERPUD1-217ENST00000569429 CDR2LQ86X02 465 aaPredicted RBP7.26□□□□□ -1.25
HERPUD1-217ENST00000569429 DCBLD1Q8N8Z6 715 aa7.26□□□□□ -1.25
HERPUD1-217ENST00000569429 SPATA20Q8TB22 786 aa7.26□□□□□ -1.25
HERPUD1-217ENST00000569429 RFFLQ8WZ73 363 aa7.26□□□□□ -1.25
HERPUD1-217ENST00000569429 LENG9Q96B70 501 aa7.26□□□□□ -1.25
HERPUD1-217ENST00000569429 PPP1R10Q96QC0 940 aaKnown RBP7.26□□□□□ -1.25
HERPUD1-217ENST00000569429 GCNAQ96QF7 691 aa7.26□□□□□ -1.25
HERPUD1-217ENST00000569429 RIT2Q99578 217 aa7.26□□□□□ -1.25
HERPUD1-217ENST00000569429 NFKBIZQ9BYH8 718 aa7.26□□□□□ -1.25
HERPUD1-217ENST00000569429 GLT8D2Q9H1C3 349 aa7.26□□□□□ -1.25
HERPUD1-217ENST00000569429 UNC45AQ9H3U1 944 aa7.26□□□□□ -1.25
HERPUD1-217ENST00000569429 CKAP5Q14008 2032 aa7.26□□□□□ -1.25
HERPUD1-217ENST00000569429 hCG_1642624A0A1W2PR95 340 aa7.25□□□□□ -1.25
HERPUD1-217ENST00000569429 CHMP2AO43633 222 aa7.25□□□□□ -1.25
HERPUD1-217ENST00000569429 ITGB2P05107 769 aa7.25□□□□□ -1.25
HERPUD1-217ENST00000569429 MX1P20591 662 aa7.25□□□□□ -1.25
HERPUD1-217ENST00000569429 GLDCP23378 1020 aa7.25□□□□□ -1.25
HERPUD1-217ENST00000569429 RFC5P40937 340 aa7.25□□□□□ -1.25
HERPUD1-217ENST00000569429 IFNAR2P48551 515 aa7.25□□□□□ -1.25
HERPUD1-217ENST00000569429 ACADVLP49748 655 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms