RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 C3orf20Q8ND61 904 aa4.24□□□□□ -1.73
HMGB1P6-201ENST00000569046 NSUN7Q8NE18 718 aaKnown RBP4.24□□□□□ -1.73
HMGB1P6-201ENST00000569046 PMM1Q92871 262 aa4.24□□□□□ -1.73
HMGB1P6-201ENST00000569046 HPS3Q969F9 1004 aa4.24□□□□□ -1.73
HMGB1P6-201ENST00000569046 RGMAQ96B86 450 aa4.24□□□□□ -1.73
HMGB1P6-201ENST00000569046 LRIG1Q96JA1 1093 aa4.24□□□□□ -1.73
HMGB1P6-201ENST00000569046 CEP89Q96ST8 783 aa4.24□□□□□ -1.73
HMGB1P6-201ENST00000569046 PNKPQ96T60 521 aa4.24□□□□□ -1.73
HMGB1P6-201ENST00000569046 PACSIN1Q9BY11 444 aa4.24□□□□□ -1.73
HMGB1P6-201ENST00000569046 SLC12A5Q9H2X9 1139 aa4.24□□□□□ -1.73
HMGB1P6-201ENST00000569046 KCNE5Q9UJ90 142 aa4.24□□□□□ -1.73
HMGB1P6-201ENST00000569046 ANKRD6Q9Y2G4 727 aa4.24□□□□□ -1.73
HMGB1P6-201ENST00000569046 SLIT2O94813 1529 aa4.24□□□□□ -1.73
HMGB1P6-201ENST00000569046 NUP188Q5SRE5 1749 aa4.24□□□□□ -1.73
HMGB1P6-201ENST00000569046 A0A087X1B8 175 aa4.23□□□□□ -1.73
HMGB1P6-201ENST00000569046 PIPSLA2A3N6 862 aa4.23□□□□□ -1.73
HMGB1P6-201ENST00000569046 E9PLN8 166 aa4.23□□□□□ -1.73
HMGB1P6-201ENST00000569046 B3GALT2O43825 422 aa4.23□□□□□ -1.73
HMGB1P6-201ENST00000569046 RAMP2O60895 175 aa4.23□□□□□ -1.73
HMGB1P6-201ENST00000569046 FTLP02792 175 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P6-201ENST00000569046 ALDH2P05091 517 aa4.23□□□□□ -1.73
HMGB1P6-201ENST00000569046 RPLP2P05387 115 aaKnown RBP4.23□□□□□ -1.73
HMGB1P6-201ENST00000569046 PRDX5P30044 214 aa4.23□□□□□ -1.73
HMGB1P6-201ENST00000569046 HK3P52790 923 aa4.23□□□□□ -1.73
HMGB1P6-201ENST00000569046 FOXI1Q12951 378 aa4.23□□□□□ -1.73
HMGB1P6-201ENST00000569046 GEN1Q17RS7 908 aa4.23□□□□□ -1.73
HMGB1P6-201ENST00000569046 PGS1Q32NB8 556 aa4.23□□□□□ -1.73
HMGB1P6-201ENST00000569046 CCDC93Q567U6 631 aa4.23□□□□□ -1.73
HMGB1P6-201ENST00000569046 HEATR3Q7Z4Q2 680 aa4.23□□□□□ -1.73
HMGB1P6-201ENST00000569046 FAM90A1Q86YD7 464 aa4.23□□□□□ -1.73
HMGB1P6-201ENST00000569046 TPH2Q8IWU9 490 aa4.23□□□□□ -1.73
HMGB1P6-201ENST00000569046 PDPRQ8NCN5 879 aa4.23□□□□□ -1.73
HMGB1P6-201ENST00000569046 GPR150Q8NGU9 434 aa4.23□□□□□ -1.73
HMGB1P6-201ENST00000569046 MORC4Q8TE76 937 aa4.23□□□□□ -1.73
HMGB1P6-201ENST00000569046 JPH3Q8WXH2 748 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P6-201ENST00000569046 FUBP1Q96AE4 644 aaKnown RBP4.23□□□□□ -1.73
HMGB1P6-201ENST00000569046 MVB12AQ96EY5 273 aa4.23□□□□□ -1.73
HMGB1P6-201ENST00000569046 BOD1Q96IK1 185 aa4.23□□□□□ -1.73
HMGB1P6-201ENST00000569046 NUP88Q99567 741 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P6-201ENST00000569046 VKORC1Q9BQB6 163 aa4.23□□□□□ -1.73
HMGB1P6-201ENST00000569046 CDH19Q9H159 772 aa4.23□□□□□ -1.73
HMGB1P6-201ENST00000569046 UNKLQ9H9P5 680 aaKnown RBP4.23□□□□□ -1.73
HMGB1P6-201ENST00000569046 MRPS18AQ9NVS2 196 aaKnown RBP4.23□□□□□ -1.73
HMGB1P6-201ENST00000569046 ZIM2Q9NZV7 527 aa4.23□□□□□ -1.73
HMGB1P6-201ENST00000569046 CTTNBP2NLQ9P2B4 639 aa4.23□□□□□ -1.73
HMGB1P6-201ENST00000569046 ABCF2Q9UG63 623 aa4.23□□□□□ -1.73
HMGB1P6-201ENST00000569046 ZNF180Q9UJW8 692 aa4.23□□□□□ -1.73
HMGB1P6-201ENST00000569046 CDYLQ9Y232 598 aa4.23□□□□□ -1.73
HMGB1P6-201ENST00000569046 MTO1Q9Y2Z2 717 aaKnown RBP4.23□□□□□ -1.73
HMGB1P6-201ENST00000569046 DMRT1Q9Y5R6 373 aa4.23□□□□□ -1.73
HMGB1P6-201ENST00000569046 NOX1Q9Y5S8 564 aa4.23□□□□□ -1.73
HMGB1P6-201ENST00000569046 EPN1Q9Y6I3 576 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P6-201ENST00000569046 PLEKHH1Q9ULM0 1364 aa4.23□□□□□ -1.73
HMGB1P6-201ENST00000569046 NPHP3Q7Z494 1330 aa4.22□□□□□ -1.73
HMGB1P6-201ENST00000569046 TMEM191CA6NGB0 347 aa4.22□□□□□ -1.73
HMGB1P6-201ENST00000569046 DTNBO60941 627 aa4.22□□□□□ -1.73
HMGB1P6-201ENST00000569046 ERN1O75460 977 aaKnown RBP4.22□□□□□ -1.73
HMGB1P6-201ENST00000569046 FOSP01100 380 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P6-201ENST00000569046 GCP02774 474 aa4.22□□□□□ -1.73
HMGB1P6-201ENST00000569046 ITGAMP11215 1152 aa4.22□□□□□ -1.73
HMGB1P6-201ENST00000569046 PHKA1P46020 1223 aa4.22□□□□□ -1.73
HMGB1P6-201ENST00000569046 VAV2P52735 878 aa4.22□□□□□ -1.73
HMGB1P6-201ENST00000569046 LRRC41Q15345 812 aa4.22□□□□□ -1.73
HMGB1P6-201ENST00000569046 SPDYE7PQ495Y7 208 aa4.22□□□□□ -1.73
HMGB1P6-201ENST00000569046 ATAT1Q5SQI0 421 aa4.22□□□□□ -1.73
HMGB1P6-201ENST00000569046 HECTD2Q5U5R9 776 aa4.22□□□□□ -1.73
HMGB1P6-201ENST00000569046 FOXR2Q6PJQ5 311 aa4.22□□□□□ -1.73
HMGB1P6-201ENST00000569046 PPP1R3BQ86XI6 285 aa4.22□□□□□ -1.73
HMGB1P6-201ENST00000569046 SH2D3CQ8N5H7 860 aa4.22□□□□□ -1.73
HMGB1P6-201ENST00000569046 SLC17A8Q8NDX2 589 aa4.22□□□□□ -1.73
HMGB1P6-201ENST00000569046 LINC00476Q8WZB0 136 aa4.22□□□□□ -1.73
HMGB1P6-201ENST00000569046 IMPG2Q9BZV3 1241 aa4.22□□□□□ -1.73
HMGB1P6-201ENST00000569046 CYP4F11Q9HBI6 524 aa4.22□□□□□ -1.73
HMGB1P6-201ENST00000569046 GALNT9Q9HCQ5 603 aa4.22□□□□□ -1.73
HMGB1P6-201ENST00000569046 SLAMF7Q9NQ25 335 aa4.22□□□□□ -1.73
HMGB1P6-201ENST00000569046 SIDT1Q9NXL6 827 aaKnown RBP4.22□□□□□ -1.73
HMGB1P6-201ENST00000569046 RNF181Q9P0P0 153 aa4.22□□□□□ -1.73
HMGB1P6-201ENST00000569046 AGAP1Q9UPQ3 857 aa4.22□□□□□ -1.73
HMGB1P6-201ENST00000569046 POLHQ9Y253 713 aa4.22□□□□□ -1.73
HMGB1P6-201ENST00000569046 RREB1Q92766 1687 aa4.22□□□□□ -1.73
HMGB1P6-201ENST00000569046 SPATA31A3Q5VYP0 1347 aa4.21□□□□□ -1.73
HMGB1P6-201ENST00000569046 SALL3Q9BXA9 1300 aa4.21□□□□□ -1.73
HMGB1P6-201ENST00000569046 WDR33Q9C0J8 1336 aaKnown RBP4.21□□□□□ -1.73
HMGB1P6-201ENST00000569046 NAIPQ13075 1403 aa4.21□□□□□ -1.73
HMGB1P6-201ENST00000569046 CHD4Q14839 1912 aa4.21□□□□□ -1.74
HMGB1P6-201ENST00000569046 E2F8A0AVK6 867 aa4.21□□□□□ -1.74
HMGB1P6-201ENST00000569046 SLC16A6O15403 523 aa4.21□□□□□ -1.74
HMGB1P6-201ENST00000569046 PRPF3O43395 683 aaKnown RBP4.21□□□□□ -1.74
HMGB1P6-201ENST00000569046 SUN1O94901 812 aa4.21□□□□□ -1.74
HMGB1P6-201ENST00000569046 MATN4O95460 622 aa4.21□□□□□ -1.74
HMGB1P6-201ENST00000569046 GJB1P08034 283 aa4.21□□□□□ -1.74
HMGB1P6-201ENST00000569046 TYRP14679 529 aa4.21□□□□□ -1.74
HMGB1P6-201ENST00000569046 LPOP22079 712 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P6-201ENST00000569046 SMARCA1P28370 1054 aa4.21□□□□□ -1.74
HMGB1P6-201ENST00000569046 EPHB1P54762 984 aa4.21□□□□□ -1.74
HMGB1P6-201ENST00000569046 PSMC1P62191 440 aaKnown RBP4.21□□□□□ -1.74
HMGB1P6-201ENST00000569046 MC2RQ01718 297 aa4.21□□□□□ -1.74
HMGB1P6-201ENST00000569046 KRTAP15-1Q3LI76 137 aa4.21□□□□□ -1.74
HMGB1P6-201ENST00000569046 IFIT1BQ5T764 474 aaKnown RBP4.21□□□□□ -1.74
HMGB1P6-201ENST00000569046 THEMIS2Q5TEJ8 643 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms