RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 LTBRP36941 435 aa19.18■□□□□ 0.66
COMMD4-222ENST00000568034 CDR1P51861 262 aa19.18■□□□□ 0.66
COMMD4-222ENST00000568034 ZNF132P52740 706 aa19.18■□□□□ 0.66
COMMD4-222ENST00000568034 RAD23BP54727 409 aa19.18■□□□□ 0.66
COMMD4-222ENST00000568034 UBASH3AP57075 661 aa19.18■□□□□ 0.66
COMMD4-222ENST00000568034 DLX2Q07687 328 aaPredicted RBP19.18■□□□□ 0.66
COMMD4-222ENST00000568034 SPATA31D4Q6ZUB0 917 aa19.18■□□□□ 0.66
COMMD4-222ENST00000568034 ACOT1Q86TX2 421 aa19.18■□□□□ 0.66
COMMD4-222ENST00000568034 DCP1BQ8IZD4 617 aaKnown RBP19.18■□□□□ 0.66
COMMD4-222ENST00000568034 CRYBG2Q8N1P7 616 aa19.18■□□□□ 0.66
COMMD4-222ENST00000568034 TTC39CQ8N584 583 aa19.18■□□□□ 0.66
COMMD4-222ENST00000568034 TTC9BQ8N6N2 239 aa19.18■□□□□ 0.66
COMMD4-222ENST00000568034 SLC4A11Q8NBS3 891 aa19.18■□□□□ 0.66
COMMD4-222ENST00000568034 ATAD1Q8NBU5 361 aa19.18■□□□□ 0.66
COMMD4-222ENST00000568034 KREMEN2Q8NCW0 462 aa19.18■□□□□ 0.66
COMMD4-222ENST00000568034 FEZF2Q8TBJ5 459 aa19.18■□□□□ 0.66
COMMD4-222ENST00000568034 PABPC5Q96DU9 382 aaKnown RBP19.18■□□□□ 0.66
COMMD4-222ENST00000568034 GPR88Q9GZN0 384 aa19.18■□□□□ 0.66
COMMD4-222ENST00000568034 MAN1C1Q9NR34 630 aa19.18■□□□□ 0.66
COMMD4-222ENST00000568034 IFNKQ9P0W0 207 aa19.18■□□□□ 0.66
COMMD4-222ENST00000568034 DNAJC12Q9UKB3 198 aa19.18■□□□□ 0.66
COMMD4-222ENST00000568034 GTF3C4Q9UKN8 822 aa19.18■□□□□ 0.66
COMMD4-222ENST00000568034 CNTN6Q9UQ52 1028 aa19.18■□□□□ 0.66
COMMD4-222ENST00000568034 EYSQ5T1H1 3165 aa19.18■□□□□ 0.66
COMMD4-222ENST00000568034 A0A1W2PQC6 194 aa19.17■□□□□ 0.66
COMMD4-222ENST00000568034 FSD2A1L4K1 749 aa19.17■□□□□ 0.66
COMMD4-222ENST00000568034 RNF225M0QZC1 329 aaPredicted RBP19.17■□□□□ 0.66
COMMD4-222ENST00000568034 UCHL3P15374 230 aa19.17■□□□□ 0.66
COMMD4-222ENST00000568034 ADCY1Q08828 1119 aa19.17■□□□□ 0.66
COMMD4-222ENST00000568034 ZNF394Q53GI3 561 aa19.17■□□□□ 0.66
COMMD4-222ENST00000568034 MDH1BQ5I0G3 518 aa19.17■□□□□ 0.66
COMMD4-222ENST00000568034 ENOSF1Q7L5Y1 443 aa19.17■□□□□ 0.66
COMMD4-222ENST00000568034 MAFAQ8NHW3 353 aaPredicted RBP19.17■□□□□ 0.66
COMMD4-222ENST00000568034 MYCBPAPQ8TBZ2 947 aa19.17■□□□□ 0.66
COMMD4-222ENST00000568034 SHC3Q92529 594 aa19.17■□□□□ 0.66
COMMD4-222ENST00000568034 MYLPFQ96A32 169 aa19.17■□□□□ 0.66
COMMD4-222ENST00000568034 JAKMIP2Q96AA8 810 aa19.17■□□□□ 0.66
COMMD4-222ENST00000568034 PCED1BQ96HM7 432 aa19.17■□□□□ 0.66
COMMD4-222ENST00000568034 NT5C1AQ9BXI3 368 aa19.17■□□□□ 0.66
COMMD4-222ENST00000568034 XPO4Q9C0E2 1151 aaKnown RBP19.17■□□□□ 0.66
COMMD4-222ENST00000568034 FAM207AQ9NSI2 230 aaPredicted RBP19.17■□□□□ 0.66
COMMD4-222ENST00000568034 CLEC1BQ9P126 229 aa19.17■□□□□ 0.66
COMMD4-222ENST00000568034 PAPLNO95428 1278 aa19.16■□□□□ 0.66
COMMD4-222ENST00000568034 RFX1P22670 979 aa19.16■□□□□ 0.66
COMMD4-222ENST00000568034 MFAP3P55082 362 aa19.16■□□□□ 0.66
COMMD4-222ENST00000568034 YWHAEP62258 255 aaKnown RBP19.16■□□□□ 0.66
COMMD4-222ENST00000568034 SMARCB1Q12824 385 aa19.16■□□□□ 0.66
COMMD4-222ENST00000568034 ARHGAP44Q17R89 818 aa19.16■□□□□ 0.66
COMMD4-222ENST00000568034 SARM1Q6SZW1 724 aa19.16■□□□□ 0.66
COMMD4-222ENST00000568034 TMEM270Q6UE05 265 aa19.16■□□□□ 0.66
COMMD4-222ENST00000568034 PAQR9Q6ZVX9 377 aa19.16■□□□□ 0.66
COMMD4-222ENST00000568034 C12orf29Q8N999 325 aa19.16■□□□□ 0.66
COMMD4-222ENST00000568034 HDAC7Q8WUI4 952 aa19.16■□□□□ 0.66
COMMD4-222ENST00000568034 PPM1EQ8WY54 764 aa19.16■□□□□ 0.66
COMMD4-222ENST00000568034 CASP10Q92851 521 aa19.16■□□□□ 0.66
COMMD4-222ENST00000568034 FAM81BQ96LP2 452 aa19.16■□□□□ 0.66
COMMD4-222ENST00000568034 B3GNT5Q9BYG0 378 aa19.16■□□□□ 0.66
COMMD4-222ENST00000568034 PLEKHA4Q9H4M7 779 aa19.16■□□□□ 0.66
COMMD4-222ENST00000568034 CLDND1Q9NY35 253 aa19.16■□□□□ 0.66
COMMD4-222ENST00000568034 PCDHB4Q9Y5E5 795 aa19.16■□□□□ 0.66
COMMD4-222ENST00000568034 NCK2O43639 380 aa19.15■□□□□ 0.66
COMMD4-222ENST00000568034 C8AP07357 584 aa19.15■□□□□ 0.66
COMMD4-222ENST00000568034 PNMA6AP0CW24 399 aaPredicted RBP19.15■□□□□ 0.66
COMMD4-222ENST00000568034 DUSP4Q13115 394 aa19.15■□□□□ 0.66
COMMD4-222ENST00000568034 NFE2Q16621 373 aaPredicted RBP19.15■□□□□ 0.66
COMMD4-222ENST00000568034 CFAP221Q4G0U5 840 aa19.15■□□□□ 0.66
COMMD4-222ENST00000568034 ANKRD54Q6NXT1 300 aa19.15■□□□□ 0.66
COMMD4-222ENST00000568034 SYCE2Q6PIF2 218 aa19.15■□□□□ 0.66
COMMD4-222ENST00000568034 TCEAL8Q8IYN2 117 aa19.15■□□□□ 0.66
COMMD4-222ENST00000568034 FUKQ8N0W3 1084 aa19.15■□□□□ 0.66
COMMD4-222ENST00000568034 RBBP8NLQ8NC74 664 aaPredicted RBP19.15■□□□□ 0.66
COMMD4-222ENST00000568034 SLC7A14Q8TBB6 771 aa19.15■□□□□ 0.66
COMMD4-222ENST00000568034 SPPL2BQ8TCT7 592 aa19.15■□□□□ 0.66
COMMD4-222ENST00000568034 C2orf15Q8WU43 125 aaKnown RBP19.15■□□□□ 0.66
COMMD4-222ENST00000568034 TMEM176AQ96HP8 235 aa19.15■□□□□ 0.66
COMMD4-222ENST00000568034 MSLNLQ96KJ4 702 aa19.15■□□□□ 0.66
COMMD4-222ENST00000568034 TNIP3Q96KP6 325 aa19.15■□□□□ 0.66
COMMD4-222ENST00000568034 RHOBTB2Q9BYZ6 727 aa19.15■□□□□ 0.66
COMMD4-222ENST00000568034 ABI2Q9NYB9 513 aaPredicted RBP19.15■□□□□ 0.66
COMMD4-222ENST00000568034 MAFFQ9ULX9 164 aa19.15■□□□□ 0.66
COMMD4-222ENST00000568034 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.14■□□□□ 0.65
COMMD4-222ENST00000568034 RFPL2O75678 378 aa19.14■□□□□ 0.65
COMMD4-222ENST00000568034 ZMYND10O75800 440 aa19.14■□□□□ 0.65
COMMD4-222ENST00000568034 CCDC130P13994 396 aa19.14■□□□□ 0.65
COMMD4-222ENST00000568034 JAM2P57087 298 aa19.14■□□□□ 0.65
COMMD4-222ENST00000568034 POLR2FP61218 127 aaKnown RBP19.14■□□□□ 0.65
COMMD4-222ENST00000568034 DRAP1Q14919 205 aaPredicted RBP19.14■□□□□ 0.65
COMMD4-222ENST00000568034 MAPRE1Q15691 268 aaKnown RBP19.14■□□□□ 0.65
COMMD4-222ENST00000568034 SMYD5Q6GMV2 418 aa19.14■□□□□ 0.65
COMMD4-222ENST00000568034 FUBP3Q96I24 572 aaKnown RBP eCLIP19.14■□□□□ 0.65
COMMD4-222ENST00000568034 ZSWIM1Q9BR11 485 aa19.14■□□□□ 0.65
COMMD4-222ENST00000568034 ZNF518BQ9C0D4 1074 aa19.14■□□□□ 0.65
COMMD4-222ENST00000568034 TTYH3Q9C0H2 523 aa19.14■□□□□ 0.65
COMMD4-222ENST00000568034 CYP4F11Q9HBI6 524 aa19.14■□□□□ 0.65
COMMD4-222ENST00000568034 ABCB6Q9NP58 842 aa19.14■□□□□ 0.65
COMMD4-222ENST00000568034 FAM49BQ9NUQ9 324 aa19.14■□□□□ 0.65
COMMD4-222ENST00000568034 TMEM30AQ9NV96 361 aa19.14■□□□□ 0.65
COMMD4-222ENST00000568034 DZANK1Q9NVP4 752 aa19.14■□□□□ 0.65
COMMD4-222ENST00000568034 HSFX1Q9UBD0 423 aa19.14■□□□□ 0.65
COMMD4-222ENST00000568034 SLC27A5Q9Y2P5 690 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms