RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 ELOA2Q8IYF1 753 aaPredicted RBP26.97■■□□□ 1.91
FANCA-228ENST00000567943 SMARCD2Q92925 531 aa26.97■■□□□ 1.91
FANCA-228ENST00000567943 PRRX2Q99811 253 aa26.97■■□□□ 1.91
FANCA-228ENST00000567943 TBC1D17Q9HA65 648 aa26.97■■□□□ 1.91
FANCA-228ENST00000567943 IL21Q9HBE4 155 aa26.97■■□□□ 1.91
FANCA-228ENST00000567943 NME7Q9Y5B8 376 aa26.97■■□□□ 1.91
FANCA-228ENST00000567943 PIEZO1Q92508 2521 aa26.97■■□□□ 1.91
FANCA-228ENST00000567943 PTPRDP23468 1912 aa26.96■■□□□ 1.91
FANCA-228ENST00000567943 COL4A2P08572 1712 aa26.96■■□□□ 1.91
FANCA-228ENST00000567943 PHACTR2O75167 634 aa26.96■■□□□ 1.91
FANCA-228ENST00000567943 LMO2P25791 158 aa26.96■■□□□ 1.91
FANCA-228ENST00000567943 PRCPP42785 496 aa26.96■■□□□ 1.91
FANCA-228ENST00000567943 GPR15P49685 360 aa26.96■■□□□ 1.91
FANCA-228ENST00000567943 CLDN10P78369 228 aa26.96■■□□□ 1.91
FANCA-228ENST00000567943 TRPC3Q13507 836 aa26.96■■□□□ 1.91
FANCA-228ENST00000567943 DPH6Q7L8W6 267 aa26.96■■□□□ 1.91
FANCA-228ENST00000567943 GIPC2Q8TF65 315 aa26.96■■□□□ 1.91
FANCA-228ENST00000567943 RSPRY1Q96DX4 576 aa26.96■■□□□ 1.91
FANCA-228ENST00000567943 PI4K2AQ9BTU6 479 aa26.96■■□□□ 1.91
FANCA-228ENST00000567943 XYLT2Q9H1B5 865 aa26.96■■□□□ 1.91
FANCA-228ENST00000567943 TRPV4Q9HBA0 871 aa26.96■■□□□ 1.91
FANCA-228ENST00000567943 GTF3C4Q9UKN8 822 aa26.96■■□□□ 1.91
FANCA-228ENST00000567943 PCDHB5Q9Y5E4 795 aa26.96■■□□□ 1.91
FANCA-228ENST00000567943 NUP210Q8TEM1 1887 aaPredicted RBP26.96■■□□□ 1.91
FANCA-228ENST00000567943 MYBPHLA2RUH7 354 aa26.95■■□□□ 1.9
FANCA-228ENST00000567943 GALR2O43603 387 aaPredicted RBP26.95■■□□□ 1.9
FANCA-228ENST00000567943 ATP2C2O75185 946 aa26.95■■□□□ 1.9
FANCA-228ENST00000567943 RPL13P26373 211 aaKnown RBP26.95■■□□□ 1.9
FANCA-228ENST00000567943 VIPR2P41587 438 aa26.95■■□□□ 1.9
FANCA-228ENST00000567943 LHX1P48742 406 aa26.95■■□□□ 1.9
FANCA-228ENST00000567943 NUBP1P53384 320 aa26.95■■□□□ 1.9
FANCA-228ENST00000567943 DLG4P78352 724 aa26.95■■□□□ 1.9
FANCA-228ENST00000567943 MYL7Q01449 175 aa26.95■■□□□ 1.9
FANCA-228ENST00000567943 BIRC3Q13489 604 aa26.95■■□□□ 1.9
FANCA-228ENST00000567943 ZCWPW2Q504Y3 356 aa26.95■■□□□ 1.9
FANCA-228ENST00000567943 ZSCAN18Q8TBC5 510 aaPredicted RBP26.95■■□□□ 1.9
FANCA-228ENST00000567943 PHOX2BQ99453 314 aa26.95■■□□□ 1.9
FANCA-228ENST00000567943 ZFP14Q9HCL3 533 aa26.95■■□□□ 1.9
FANCA-228ENST00000567943 GREB1Q4ZG55 1949 aa26.94■■□□□ 1.9
FANCA-228ENST00000567943 AKAP3O75969 853 aa26.94■■□□□ 1.9
FANCA-228ENST00000567943 HMGA1P17096 107 aaKnown RBP26.94■■□□□ 1.9
FANCA-228ENST00000567943 GABRR2P28476 465 aa26.94■■□□□ 1.9
FANCA-228ENST00000567943 AP3M2P53677 418 aa26.94■■□□□ 1.9
FANCA-228ENST00000567943 PTPN5P54829 565 aa26.94■■□□□ 1.9
FANCA-228ENST00000567943 STARD6P59095 220 aa26.94■■□□□ 1.9
FANCA-228ENST00000567943 MYL6P60660 151 aa26.94■■□□□ 1.9
FANCA-228ENST00000567943 UBE2HP62256 183 aa26.94■■□□□ 1.9
FANCA-228ENST00000567943 ADAM9Q13443 819 aa26.94■■□□□ 1.9
FANCA-228ENST00000567943 NFE2Q16621 373 aaPredicted RBP26.94■■□□□ 1.9
FANCA-228ENST00000567943 TDRD10Q5VZ19 366 aaKnown RBP26.94■■□□□ 1.9
FANCA-228ENST00000567943 ISM2Q6H9L7 571 aa26.94■■□□□ 1.9
FANCA-228ENST00000567943 PHLDB3Q6NSJ2 640 aa26.94■■□□□ 1.9
FANCA-228ENST00000567943 FAM171BQ6P995 826 aa26.94■■□□□ 1.9
FANCA-228ENST00000567943 VITQ6UXI7 678 aa26.94■■□□□ 1.9
FANCA-228ENST00000567943 ITIH5Q86UX2 942 aa26.94■■□□□ 1.9
FANCA-228ENST00000567943 STKLD1Q8NE28 680 aa26.94■■□□□ 1.9
FANCA-228ENST00000567943 FAM200AQ8TCP9 573 aa26.94■■□□□ 1.9
FANCA-228ENST00000567943 TMC2Q8TDI7 906 aa26.94■■□□□ 1.9
FANCA-228ENST00000567943 MMS19Q96T76 1030 aa26.94■■□□□ 1.9
FANCA-228ENST00000567943 MRPL45Q9BRJ2 306 aaKnown RBP26.94■■□□□ 1.9
FANCA-228ENST00000567943 TICRRQ7Z2Z1 1910 aa26.93■■□□□ 1.9
FANCA-228ENST00000567943 MAPK13O15264 365 aa26.93■■□□□ 1.9
FANCA-228ENST00000567943 C4BPAP04003 597 aaKnown RBP26.93■■□□□ 1.9
FANCA-228ENST00000567943 CYP2F1P24903 491 aa26.93■■□□□ 1.9
FANCA-228ENST00000567943 GRM2Q14416 872 aa26.93■■□□□ 1.9
FANCA-228ENST00000567943 SLC44A4Q53GD3 710 aa26.93■■□□□ 1.9
FANCA-228ENST00000567943 SDHAF4Q5VUM1 108 aa26.93■■□□□ 1.9
FANCA-228ENST00000567943 TMEM150AQ86TG1 271 aa26.93■■□□□ 1.9
FANCA-228ENST00000567943 DDX23Q9BUQ8 820 aaKnown RBP26.93■■□□□ 1.9
FANCA-228ENST00000567943 CRTAC1Q9NQ79 661 aa26.93■■□□□ 1.9
FANCA-228ENST00000567943 MAN1B1Q9UKM7 699 aa26.93■■□□□ 1.9
FANCA-228ENST00000567943 MIA3Q5JRA6 1907 aa26.92■■□□□ 1.9
FANCA-228ENST00000567943 SHISA7A6NL88 538 aa26.92■■□□□ 1.9
FANCA-228ENST00000567943 WARSP23381 471 aaKnown RBP26.92■■□□□ 1.9
FANCA-228ENST00000567943 HOXD11P31277 338 aaPredicted RBP26.92■■□□□ 1.9
FANCA-228ENST00000567943 EDRF1Q3B7T1 1238 aa26.92■■□□□ 1.9
FANCA-228ENST00000567943 WDR72Q3MJ13 1102 aa26.92■■□□□ 1.9
FANCA-228ENST00000567943 COBLL1Q53SF7 1204 aa26.92■■□□□ 1.9
FANCA-228ENST00000567943 C1orf220Q5T0J3 134 aa26.92■■□□□ 1.9
FANCA-228ENST00000567943 GPIHBP1Q8IV16 184 aa26.92■■□□□ 1.9
FANCA-228ENST00000567943 FAM186BQ8IYM0 893 aa26.92■■□□□ 1.9
FANCA-228ENST00000567943 GTPBP4Q9BZE4 634 aaKnown RBP26.92■■□□□ 1.9
FANCA-228ENST00000567943 FOXQ1Q9C009 403 aa26.92■■□□□ 1.9
FANCA-228ENST00000567943 GPR88Q9GZN0 384 aa26.92■■□□□ 1.9
FANCA-228ENST00000567943 ATXN3LQ9H3M9 355 aa26.92■■□□□ 1.9
FANCA-228ENST00000567943 ABCB6Q9NP58 842 aa26.92■■□□□ 1.9
FANCA-228ENST00000567943 H0Y858 1186 aa26.91■■□□□ 1.9
FANCA-228ENST00000567943 STK25O00506 426 aa26.91■■□□□ 1.9
FANCA-228ENST00000567943 VNN1O95497 513 aa26.91■■□□□ 1.9
FANCA-228ENST00000567943 STAU1O95793 577 aaKnown RBP26.91■■□□□ 1.9
FANCA-228ENST00000567943 PCSK1P29120 753 aa26.91■■□□□ 1.9
FANCA-228ENST00000567943 ATICP31939 592 aa26.91■■□□□ 1.9
FANCA-228ENST00000567943 PSMC2P35998 433 aaKnown RBP26.91■■□□□ 1.9
FANCA-228ENST00000567943 VAMP7P51809 220 aa26.91■■□□□ 1.9
FANCA-228ENST00000567943 PSMC1P62191 440 aaKnown RBP26.91■■□□□ 1.9
FANCA-228ENST00000567943 TNNC1P63316 161 aa26.91■■□□□ 1.9
FANCA-228ENST00000567943 VEPH1Q14D04 833 aa26.91■■□□□ 1.9
FANCA-228ENST00000567943 MLF2Q15773 248 aaPredicted RBP26.91■■□□□ 1.9
FANCA-228ENST00000567943 DDR2Q16832 855 aa26.91■■□□□ 1.9
FANCA-228ENST00000567943 SYAP1Q96A49 352 aaPredicted RBP26.91■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms