RNA–Protein interactions for RNA: ENST00000566452.1

BBS2-215, Transcript of Bardet-Biedl syndrome 2, human

TSL 2

Gene BBS2, Length 299 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS2-215	ENST00000566452	NKD2	Q969F2	451 aa	Predicted RBP	4.25	□□□□□ -1.73
BBS2-215	ENST00000566452	LRRC46	Q96FV0	321 aa		4.25	□□□□□ -1.73
BBS2-215	ENST00000566452	GDF15	Q99988	308 aa		4.25	□□□□□ -1.73
BBS2-215	ENST00000566452	C1orf43	Q9BWL3	253 aa		4.25	□□□□□ -1.73
BBS2-215	ENST00000566452	STK31	Q9BXU1	1019 aa		4.25	□□□□□ -1.73
BBS2-215	ENST00000566452	C19orf44	Q9H6X5	657 aa		4.25	□□□□□ -1.73
BBS2-215	ENST00000566452	JMJD4	Q9H9V9	463 aa		4.25	□□□□□ -1.73
BBS2-215	ENST00000566452	CD320	Q9NPF0	282 aa		4.25	□□□□□ -1.73
BBS2-215	ENST00000566452	A1CF	Q9NQ94	594 aa	Known RBP	4.25	□□□□□ -1.73
BBS2-215	ENST00000566452	GGA3	Q9NZ52	723 aa		4.25	□□□□□ -1.73
BBS2-215	ENST00000566452	GPRC5D	Q9NZD1	345 aa		4.25	□□□□□ -1.73
BBS2-215	ENST00000566452	KIF17	Q9P2E2	1029 aa		4.25	□□□□□ -1.73
BBS2-215	ENST00000566452		Q9UFV3	132 aa		4.25	□□□□□ -1.73
BBS2-215	ENST00000566452	ITGB1BP2	Q9UKP3	347 aa		4.25	□□□□□ -1.73
BBS2-215	ENST00000566452	TRPC5	Q9UL62	973 aa	Predicted RBP	4.25	□□□□□ -1.73
BBS2-215	ENST00000566452	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	4.25	□□□□□ -1.73
BBS2-215	ENST00000566452	EFCAB6	Q5THR3	1501 aa		4.25	□□□□□ -1.73
BBS2-215	ENST00000566452	TMEM2	Q9UHN6	1383 aa		4.25	□□□□□ -1.73
BBS2-215	ENST00000566452	EIF2AK4	Q9P2K8	1649 aa	Known RBP	4.24	□□□□□ -1.73
BBS2-215	ENST00000566452	CCDC196	A0A1B0GTZ2	297 aa		4.24	□□□□□ -1.73
BBS2-215	ENST00000566452	ANKRD18B	A2A2Z9	1011 aa		4.24	□□□□□ -1.73
BBS2-215	ENST00000566452		A6NCN8	305 aa		4.24	□□□□□ -1.73
BBS2-215	ENST00000566452	PYCARD-AS1	I3L0S3	204 aa		4.24	□□□□□ -1.73
BBS2-215	ENST00000566452	ABLIM1	O14639	778 aa		4.24	□□□□□ -1.73
BBS2-215	ENST00000566452	N4BP3	O15049	544 aa		4.24	□□□□□ -1.73
BBS2-215	ENST00000566452	DAPK3	O43293	454 aa		4.24	□□□□□ -1.73
BBS2-215	ENST00000566452	NDST3	O95803	873 aa		4.24	□□□□□ -1.73
BBS2-215	ENST00000566452	IL18BP	O95998	194 aa		4.24	□□□□□ -1.73
BBS2-215	ENST00000566452	ITGA2B	P08514	1039 aa		4.24	□□□□□ -1.73
BBS2-215	ENST00000566452	IL1R1	P14778	569 aa		4.24	□□□□□ -1.73
BBS2-215	ENST00000566452	HNRNPL	P14866	589 aa	Known RBP eCLIP	4.24	□□□□□ -1.73
BBS2-215	ENST00000566452	HDC	P19113	662 aa		4.24	□□□□□ -1.73
BBS2-215	ENST00000566452	GABRB3	P28472	473 aa		4.24	□□□□□ -1.73
BBS2-215	ENST00000566452	PCSK1	P29120	753 aa		4.24	□□□□□ -1.73
BBS2-215	ENST00000566452	LIFR	P42702	1097 aa		4.24	□□□□□ -1.73
BBS2-215	ENST00000566452	GLRB	P48167	497 aa		4.24	□□□□□ -1.73
BBS2-215	ENST00000566452	NAP1L1	P55209	391 aa	Known RBP	4.24	□□□□□ -1.73
BBS2-215	ENST00000566452	ERVFC1	P60507	584 aa		4.24	□□□□□ -1.73
BBS2-215	ENST00000566452	VAMP2	P63027	116 aa		4.24	□□□□□ -1.73
BBS2-215	ENST00000566452	POU6F2	P78424	691 aa	Predicted RBP	4.24	□□□□□ -1.73
BBS2-215	ENST00000566452	TRPC3	Q13507	836 aa		4.24	□□□□□ -1.73
BBS2-215	ENST00000566452	NFIX	Q14938	502 aa		4.24	□□□□□ -1.73
BBS2-215	ENST00000566452	NBPF8	Q3BBV2	869 aa		4.24	□□□□□ -1.73
BBS2-215	ENST00000566452	CD300LD	Q6UXZ3	194 aa		4.24	□□□□□ -1.73
BBS2-215	ENST00000566452	BRINP3	Q76B58	766 aa		4.24	□□□□□ -1.73
BBS2-215	ENST00000566452	MOGAT3	Q86VF5	341 aa		4.24	□□□□□ -1.73
BBS2-215	ENST00000566452	YAF2	Q8IY57	180 aa		4.24	□□□□□ -1.73
BBS2-215	ENST00000566452	FTSJ3	Q8IY81	847 aa	Known RBP	4.24	□□□□□ -1.73
BBS2-215	ENST00000566452	TRMT2A	Q8IZ69	625 aa	Known RBP	4.24	□□□□□ -1.73
BBS2-215	ENST00000566452	BCL6B	Q8N143	479 aa	Predicted RBP	4.24	□□□□□ -1.73
BBS2-215	ENST00000566452	VGLL2	Q8N8G2	317 aa		4.24	□□□□□ -1.73
BBS2-215	ENST00000566452	GLIS1	Q8NBF1	620 aa		4.24	□□□□□ -1.73
BBS2-215	ENST00000566452	FBXO15	Q8NCQ5	510 aa	Predicted RBP	4.24	□□□□□ -1.73
BBS2-215	ENST00000566452	STYX	Q8WUJ0	223 aa		4.24	□□□□□ -1.73
BBS2-215	ENST00000566452	CPA5	Q8WXQ8	436 aa		4.24	□□□□□ -1.73
BBS2-215	ENST00000566452	THAP4	Q8WY91	577 aa		4.24	□□□□□ -1.73
BBS2-215	ENST00000566452	HERVK_113	Q902F9	699 aa		4.24	□□□□□ -1.73
BBS2-215	ENST00000566452	LRRC59	Q96AG4	307 aa	Known RBP	4.24	□□□□□ -1.73
BBS2-215	ENST00000566452	SNX27	Q96L92	541 aa		4.24	□□□□□ -1.73
BBS2-215	ENST00000566452	SERINC2	Q96SA4	455 aa		4.24	□□□□□ -1.73
BBS2-215	ENST00000566452	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	4.24	□□□□□ -1.73
BBS2-215	ENST00000566452	C11orf54	Q9H0W9	315 aa	Predicted RBP	4.24	□□□□□ -1.73
BBS2-215	ENST00000566452	ZCCHC4	Q9H5U6	513 aa		4.24	□□□□□ -1.73
BBS2-215	ENST00000566452	BCAS3	Q9H6U6	928 aa		4.24	□□□□□ -1.73
BBS2-215	ENST00000566452	LDAH	Q9H6V9	325 aa		4.24	□□□□□ -1.73
BBS2-215	ENST00000566452	PCDH18	Q9HCL0	1135 aa		4.24	□□□□□ -1.73
BBS2-215	ENST00000566452	RIC8A	Q9NPQ8	531 aa		4.24	□□□□□ -1.73
BBS2-215	ENST00000566452	KCND1	Q9NSA2	647 aa		4.24	□□□□□ -1.73
BBS2-215	ENST00000566452	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	4.24	□□□□□ -1.73
BBS2-215	ENST00000566452	USP40	Q9NVE5	1235 aa		4.24	□□□□□ -1.73
BBS2-215	ENST00000566452	RLIM	Q9NVW2	624 aa		4.24	□□□□□ -1.73
BBS2-215	ENST00000566452	MOCS1	Q9NZB8	636 aa		4.24	□□□□□ -1.73
BBS2-215	ENST00000566452	RGL1	Q9NZL6	768 aa		4.24	□□□□□ -1.73
BBS2-215	ENST00000566452	CFAP97	Q9P2B7	532 aa		4.24	□□□□□ -1.73
BBS2-215	ENST00000566452	IGSF9	Q9P2J2	1179 aa		4.24	□□□□□ -1.73
BBS2-215	ENST00000566452	MAGEL2	Q9UJ55	1249 aa		4.24	□□□□□ -1.73
BBS2-215	ENST00000566452	VWA7	Q9Y334	891 aa		4.24	□□□□□ -1.73
BBS2-215	ENST00000566452	HCFC2	Q9Y5Z7	792 aa		4.24	□□□□□ -1.73
BBS2-215	ENST00000566452	MROH1	Q8NDA8	1641 aa		4.24	□□□□□ -1.73
BBS2-215	ENST00000566452	CCDC141	Q6ZP82	1450 aa		4.24	□□□□□ -1.73
BBS2-215	ENST00000566452	MBD5	Q9P267	1494 aa		4.24	□□□□□ -1.73
BBS2-215	ENST00000566452	RGPD1	P0DJD0	1748 aa		4.24	□□□□□ -1.73
BBS2-215	ENST00000566452	BLM	P54132	1417 aa	Predicted RBP	4.23	□□□□□ -1.73
BBS2-215	ENST00000566452	CASKIN1	Q8WXD9	1431 aa		4.23	□□□□□ -1.73
BBS2-215	ENST00000566452	ASXL1	Q8IXJ9	1541 aa		4.23	□□□□□ -1.73
BBS2-215	ENST00000566452		A0A0B4J269	797 aa		4.23	□□□□□ -1.73
BBS2-215	ENST00000566452		F5H0A9	414 aa	Predicted RBP	4.23	□□□□□ -1.73
BBS2-215	ENST00000566452	PIP5K1B	O14986	540 aa		4.23	□□□□□ -1.73
BBS2-215	ENST00000566452	ASNA1	O43681	348 aa		4.23	□□□□□ -1.73
BBS2-215	ENST00000566452	NUAK1	O60285	661 aa		4.23	□□□□□ -1.73
BBS2-215	ENST00000566452	ITGA10	O75578	1167 aa		4.23	□□□□□ -1.73
BBS2-215	ENST00000566452	ALDH1A2	O94788	518 aa		4.23	□□□□□ -1.73
BBS2-215	ENST00000566452	INMT	O95050	263 aa		4.23	□□□□□ -1.73
BBS2-215	ENST00000566452	TNFRSF6B	O95407	300 aa		4.23	□□□□□ -1.73
BBS2-215	ENST00000566452	TBX18	O95935	607 aa		4.23	□□□□□ -1.73
BBS2-215	ENST00000566452	GNAI2	P04899	355 aa		4.23	□□□□□ -1.73
BBS2-215	ENST00000566452	CHGB	P05060	677 aa		4.23	□□□□□ -1.73
BBS2-215	ENST00000566452	ADRB1	P08588	477 aa		4.23	□□□□□ -1.73
BBS2-215	ENST00000566452	TXN	P10599	105 aa	Known RBP	4.23	□□□□□ -1.73
BBS2-215	ENST00000566452	CYP2C8	P10632	490 aa		4.23	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms