RNA–Protein interactions for RNA: ENST00000566398.1

CPNE7-208, Transcript of copine 7, humanhuman

TSL 3

Gene CPNE7, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-208ENST00000566398 PI15O43692 258 aa20.33■□□□□ 0.85
CPNE7-208ENST00000566398 CLSTN1O94985 981 aa20.33■□□□□ 0.85
CPNE7-208ENST00000566398 CST3P01034 146 aaPredicted RBP20.33■□□□□ 0.85
CPNE7-208ENST00000566398 WARSP23381 471 aaKnown RBP20.33■□□□□ 0.85
CPNE7-208ENST00000566398 CDC25CP30307 473 aa20.33■□□□□ 0.85
CPNE7-208ENST00000566398 ATICP31939 592 aa20.33■□□□□ 0.85
CPNE7-208ENST00000566398 VIPR2P41587 438 aa20.33■□□□□ 0.85
CPNE7-208ENST00000566398 RPL10AP62906 217 aaKnown RBP20.33■□□□□ 0.85
CPNE7-208ENST00000566398 SNW1Q13573 536 aaKnown RBP20.33■□□□□ 0.85
CPNE7-208ENST00000566398 GRM2Q14416 872 aa20.33■□□□□ 0.85
CPNE7-208ENST00000566398 MLF2Q15773 248 aaPredicted RBP20.33■□□□□ 0.85
CPNE7-208ENST00000566398 WDR72Q3MJ13 1102 aa20.33■□□□□ 0.85
CPNE7-208ENST00000566398 FMR1NBQ8N0W7 255 aaPredicted RBP20.33■□□□□ 0.85
CPNE7-208ENST00000566398 DEPDC1BQ8WUY9 529 aa20.33■□□□□ 0.85
CPNE7-208ENST00000566398 SYAP1Q96A49 352 aaPredicted RBP20.33■□□□□ 0.85
CPNE7-208ENST00000566398 IRF2BPLQ9H1B7 796 aa20.33■□□□□ 0.85
CPNE7-208ENST00000566398 CDH9Q9ULB4 789 aa20.33■□□□□ 0.85
CPNE7-208ENST00000566398 MAPK8IP1Q9UQF2 711 aa20.33■□□□□ 0.85
CPNE7-208ENST00000566398 NOTCH4Q99466 2003 aa20.32■□□□□ 0.84
CPNE7-208ENST00000566398 MYBPHLA2RUH7 354 aa20.32■□□□□ 0.84
CPNE7-208ENST00000566398 STAU1O95793 577 aaKnown RBP20.32■□□□□ 0.84
CPNE7-208ENST00000566398 MYL6P60660 151 aa20.32■□□□□ 0.84
CPNE7-208ENST00000566398 PSMC1P62191 440 aaKnown RBP20.32■□□□□ 0.84
CPNE7-208ENST00000566398 CLDN10P78369 228 aa20.32■□□□□ 0.84
CPNE7-208ENST00000566398 PRKCQQ04759 706 aa20.32■□□□□ 0.84
CPNE7-208ENST00000566398 CCDC142Q17RM4 750 aa20.32■□□□□ 0.84
CPNE7-208ENST00000566398 CFAP221Q4G0U5 840 aa20.32■□□□□ 0.84
CPNE7-208ENST00000566398 SLC44A4Q53GD3 710 aa20.32■□□□□ 0.84
CPNE7-208ENST00000566398 STXBP5Q5T5C0 1151 aa20.32■□□□□ 0.84
CPNE7-208ENST00000566398 GPR158Q5T848 1215 aa20.32■□□□□ 0.84
CPNE7-208ENST00000566398 TDRD10Q5VZ19 366 aaKnown RBP20.32■□□□□ 0.84
CPNE7-208ENST00000566398 C4orf50Q6ZRC1 276 aa20.32■□□□□ 0.84
CPNE7-208ENST00000566398 GUF1Q8N442 669 aaKnown RBP20.32■□□□□ 0.84
CPNE7-208ENST00000566398 E2F7Q96AV8 911 aa20.32■□□□□ 0.84
CPNE7-208ENST00000566398 FUBP3Q96I24 572 aaKnown RBP eCLIP20.32■□□□□ 0.84
CPNE7-208ENST00000566398 TRMT61BQ9BVS5 477 aaKnown RBP20.32■□□□□ 0.84
CPNE7-208ENST00000566398 XYLT2Q9H1B5 865 aa20.32■□□□□ 0.84
CPNE7-208ENST00000566398 SNX25Q9H3E2 840 aa20.32■□□□□ 0.84
CPNE7-208ENST00000566398 BRD9Q9H8M2 597 aa20.32■□□□□ 0.84
CPNE7-208ENST00000566398 DOCK6Q96HP0 2047 aa20.31■□□□□ 0.84
CPNE7-208ENST00000566398 KMT2EQ8IZD2 1858 aa20.31■□□□□ 0.84
CPNE7-208ENST00000566398 TACC1O75410 805 aa20.31■□□□□ 0.84
CPNE7-208ENST00000566398 PSMC3P17980 439 aa20.31■□□□□ 0.84
CPNE7-208ENST00000566398 NR2F2P24468 414 aa20.31■□□□□ 0.84
CPNE7-208ENST00000566398 CYP2F1P24903 491 aa20.31■□□□□ 0.84
CPNE7-208ENST00000566398 LMO2P25791 158 aa20.31■□□□□ 0.84
CPNE7-208ENST00000566398 GPR15P49685 360 aa20.31■□□□□ 0.84
CPNE7-208ENST00000566398 STARD6P59095 220 aa20.31■□□□□ 0.84
CPNE7-208ENST00000566398 FAM160A1Q05DH4 1040 aa20.31■□□□□ 0.84
CPNE7-208ENST00000566398 NCOA4Q13772 614 aa20.31■□□□□ 0.84
CPNE7-208ENST00000566398 MAPRE1Q15691 268 aaKnown RBP20.31■□□□□ 0.84
CPNE7-208ENST00000566398 ZNF699Q32M78 642 aa20.31■□□□□ 0.84
CPNE7-208ENST00000566398 VITQ6UXI7 678 aa20.31■□□□□ 0.84
CPNE7-208ENST00000566398 CCDC105Q8IYK2 499 aa20.31■□□□□ 0.84
CPNE7-208ENST00000566398 DNASE1L2Q92874 299 aa20.31■□□□□ 0.84
CPNE7-208ENST00000566398 MRPL45Q9BRJ2 306 aaKnown RBP20.31■□□□□ 0.84
CPNE7-208ENST00000566398 IL21Q9HBE4 155 aa20.31■□□□□ 0.84
CPNE7-208ENST00000566398 RMND1Q9NWS8 449 aa20.31■□□□□ 0.84
CPNE7-208ENST00000566398 NXF1Q9UBU9 619 aaKnown RBP20.31■□□□□ 0.84
CPNE7-208ENST00000566398 ATP2C2O75185 946 aa20.3■□□□□ 0.84
CPNE7-208ENST00000566398 PDGFRBP09619 1106 aa20.3■□□□□ 0.84
CPNE7-208ENST00000566398 FAM163BP0C2L3 166 aa20.3■□□□□ 0.84
CPNE7-208ENST00000566398 CSH1P0DML2 217 aa20.3■□□□□ 0.84
CPNE7-208ENST00000566398 CSH2P0DML3 217 aa20.3■□□□□ 0.84
CPNE7-208ENST00000566398 CYP4F8P98187 520 aa20.3■□□□□ 0.84
CPNE7-208ENST00000566398 PNOCQ13519 176 aa20.3■□□□□ 0.84
CPNE7-208ENST00000566398 NFIL3Q16649 462 aa20.3■□□□□ 0.84
CPNE7-208ENST00000566398 DDR2Q16832 855 aa20.3■□□□□ 0.84
CPNE7-208ENST00000566398 SDHAF4Q5VUM1 108 aa20.3■□□□□ 0.84
CPNE7-208ENST00000566398 FAM171BQ6P995 826 aa20.3■□□□□ 0.84
CPNE7-208ENST00000566398 TMC2Q8TDI7 906 aa20.3■□□□□ 0.84
CPNE7-208ENST00000566398 MYLPFQ96A32 169 aa20.3■□□□□ 0.84
CPNE7-208ENST00000566398 MKNK1Q9BUB5 465 aa20.3■□□□□ 0.84
CPNE7-208ENST00000566398 FOXQ1Q9C009 403 aa20.3■□□□□ 0.84
CPNE7-208ENST00000566398 TASP1Q9H6P5 420 aa20.3■□□□□ 0.84
CPNE7-208ENST00000566398 MAGED2Q9UNF1 606 aaPredicted RBP20.3■□□□□ 0.84
CPNE7-208ENST00000566398 SIT1Q9Y3P8 196 aa20.3■□□□□ 0.84
CPNE7-208ENST00000566398 KANSL1LA0AUZ9 987 aa20.29■□□□□ 0.84
CPNE7-208ENST00000566398 HEPACAM2A8MVW5 462 aa20.29■□□□□ 0.84
CPNE7-208ENST00000566398 H0Y858 1186 aa20.29■□□□□ 0.84
CPNE7-208ENST00000566398 HMGA1P17096 107 aaKnown RBP20.29■□□□□ 0.84
CPNE7-208ENST00000566398 RPL13P26373 211 aaKnown RBP20.29■□□□□ 0.84
CPNE7-208ENST00000566398 GDI1P31150 447 aa20.29■□□□□ 0.84
CPNE7-208ENST00000566398 GNL1P36915 607 aaPredicted RBP20.29■□□□□ 0.84
CPNE7-208ENST00000566398 MAGEA11P43364 429 aa20.29■□□□□ 0.84
CPNE7-208ENST00000566398 DLG4P78352 724 aa20.29■□□□□ 0.84
CPNE7-208ENST00000566398 TPRG1Q6ZUI0 275 aa20.29■□□□□ 0.84
CPNE7-208ENST00000566398 ARID3BQ8IVW6 561 aaPredicted RBP20.29■□□□□ 0.84
CPNE7-208ENST00000566398 MFSD6LQ8IWD5 586 aa20.29■□□□□ 0.84
CPNE7-208ENST00000566398 SCN4BQ8IWT1 228 aa20.29■□□□□ 0.84
CPNE7-208ENST00000566398 YAF2Q8IY57 180 aa20.29■□□□□ 0.84
CPNE7-208ENST00000566398 DTWD2Q8NBA8 298 aa20.29■□□□□ 0.84
CPNE7-208ENST00000566398 ENGASEQ8NFI3 743 aa20.29■□□□□ 0.84
CPNE7-208ENST00000566398 PJA1Q8NG27 643 aa20.29■□□□□ 0.84
CPNE7-208ENST00000566398 OR6B3Q8NGW1 331 aa20.29■□□□□ 0.84
CPNE7-208ENST00000566398 IRF7Q92985 503 aa20.29■□□□□ 0.84
CPNE7-208ENST00000566398 VRTNQ9H8Y1 702 aa20.29■□□□□ 0.84
CPNE7-208ENST00000566398 CRTAC1Q9NQ79 661 aa20.29■□□□□ 0.84
CPNE7-208ENST00000566398 MAGEC2Q9UBF1 373 aaPredicted RBP20.29■□□□□ 0.84
CPNE7-208ENST00000566398 ZMYM5Q9UJ78 669 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms