RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 ZNF576Q9H609 170 aa8.28□□□□□ -1.08
CDH1-208ENST00000565810 RXFP1Q9HBX9 757 aa8.28□□□□□ -1.08
CDH1-208ENST00000565810 FNIP2Q9P278 1114 aa8.28□□□□□ -1.08
CDH1-208ENST00000565810 MTRRQ9UBK8 725 aa8.28□□□□□ -1.08
CDH1-208ENST00000565810 HESX1Q9UBX0 185 aa8.28□□□□□ -1.08
CDH1-208ENST00000565810 CEP83Q9Y592 693 aa8.28□□□□□ -1.08
CDH1-208ENST00000565810 CDY1Q9Y6F8 540 aa8.28□□□□□ -1.08
CDH1-208ENST00000565810 ATP8B3O60423 1300 aa8.28□□□□□ -1.08
CDH1-208ENST00000565810 COL4A6Q14031 1691 aa8.27□□□□□ -1.08
CDH1-208ENST00000565810 CITO14578 2027 aa8.27□□□□□ -1.09
CDH1-208ENST00000565810 MYBPHLA2RUH7 354 aa8.27□□□□□ -1.09
CDH1-208ENST00000565810 CSPG5O95196 566 aa8.27□□□□□ -1.09
CDH1-208ENST00000565810 ADH1AP07327 375 aa8.27□□□□□ -1.09
CDH1-208ENST00000565810 SKILP12757 684 aa8.27□□□□□ -1.09
CDH1-208ENST00000565810 TNFAIP3P21580 790 aa8.27□□□□□ -1.09
CDH1-208ENST00000565810 KLRC2P26717 231 aa8.27□□□□□ -1.09
CDH1-208ENST00000565810 HNRNPH3P31942 346 aaKnown RBP8.27□□□□□ -1.09
CDH1-208ENST00000565810 ELF1P32519 619 aa8.27□□□□□ -1.09
CDH1-208ENST00000565810 OR1D2P34982 312 aa8.27□□□□□ -1.09
CDH1-208ENST00000565810 PRKCIP41743 596 aa8.27□□□□□ -1.09
CDH1-208ENST00000565810 NDUFV1P49821 464 aa8.27□□□□□ -1.09
CDH1-208ENST00000565810 ERVFC1P60507 584 aa8.27□□□□□ -1.09
CDH1-208ENST00000565810 CYP27A1Q02318 531 aa8.27□□□□□ -1.09
CDH1-208ENST00000565810 GOLGA8FQ08AF8 430 aa8.27□□□□□ -1.09
CDH1-208ENST00000565810 GOLGA8DPQ0D2H9 430 aa8.27□□□□□ -1.09
CDH1-208ENST00000565810 GPR17Q13304 367 aa8.27□□□□□ -1.09
CDH1-208ENST00000565810 ARID5BQ14865 1188 aa8.27□□□□□ -1.09
CDH1-208ENST00000565810 PTPN14Q15678 1187 aa8.27□□□□□ -1.09
CDH1-208ENST00000565810 CNGA2Q16280 664 aa8.27□□□□□ -1.09
CDH1-208ENST00000565810 SLC39A12Q504Y0 691 aa8.27□□□□□ -1.09
CDH1-208ENST00000565810 MDH1BQ5I0G3 518 aa8.27□□□□□ -1.09
CDH1-208ENST00000565810 TAF3Q5VWG9 929 aa8.27□□□□□ -1.09
CDH1-208ENST00000565810 TPGS2Q68CL5 300 aa8.27□□□□□ -1.09
CDH1-208ENST00000565810 ARHGAP17Q68EM7 881 aa8.27□□□□□ -1.09
CDH1-208ENST00000565810 SLC8B1Q6J4K2 584 aa8.27□□□□□ -1.09
CDH1-208ENST00000565810 FAM171BQ6P995 826 aa8.27□□□□□ -1.09
CDH1-208ENST00000565810 IRF2BP2Q7Z5L9 587 aa8.27□□□□□ -1.09
CDH1-208ENST00000565810 TMTC1Q8IUR5 882 aa8.27□□□□□ -1.09
CDH1-208ENST00000565810 MRPL43Q8N983 215 aaKnown RBP8.27□□□□□ -1.09
CDH1-208ENST00000565810 C12orf29Q8N999 325 aa8.27□□□□□ -1.09
CDH1-208ENST00000565810 OR10T2Q8NGX3 314 aa8.27□□□□□ -1.09
CDH1-208ENST00000565810 ZNF606Q8WXB4 792 aa8.27□□□□□ -1.09
CDH1-208ENST00000565810 AUTS2Q8WXX7 1259 aa8.27□□□□□ -1.09
CDH1-208ENST00000565810 MYLPFQ96A32 169 aa8.27□□□□□ -1.09
CDH1-208ENST00000565810 PDLIM2Q96JY6 352 aa8.27□□□□□ -1.09
CDH1-208ENST00000565810 CCDC42Q96M95 316 aa8.27□□□□□ -1.09
CDH1-208ENST00000565810 AGPAT1Q99943 283 aa8.27□□□□□ -1.09
CDH1-208ENST00000565810 RTP3Q9BQQ7 232 aa8.27□□□□□ -1.09
CDH1-208ENST00000565810 HAUS4Q9H6D7 363 aa8.27□□□□□ -1.09
CDH1-208ENST00000565810 SEPT11Q9NVA2 429 aaKnown RBP8.27□□□□□ -1.09
CDH1-208ENST00000565810 HMGXB4Q9UGU5 601 aa8.27□□□□□ -1.09
CDH1-208ENST00000565810 GTF3C4Q9UKN8 822 aa8.27□□□□□ -1.09
CDH1-208ENST00000565810 PCDHB5Q9Y5E4 795 aa8.27□□□□□ -1.09
CDH1-208ENST00000565810 IRAK3Q9Y616 596 aa8.27□□□□□ -1.09
CDH1-208ENST00000565810 RALGAPA2Q2PPJ7 1873 aa8.26□□□□□ -1.09
CDH1-208ENST00000565810 SSU72P8A0A1W2PR75 194 aa8.26□□□□□ -1.09
CDH1-208ENST00000565810 TEX28O15482 410 aa8.26□□□□□ -1.09
CDH1-208ENST00000565810 HCRTO43612 131 aa8.26□□□□□ -1.09
CDH1-208ENST00000565810 AKR1B10O60218 316 aa8.26□□□□□ -1.09
CDH1-208ENST00000565810 TBC1D4O60343 1298 aa8.26□□□□□ -1.09
CDH1-208ENST00000565810 LILRB3O75022 631 aa8.26□□□□□ -1.09
CDH1-208ENST00000565810 ATP2C2O75185 946 aa8.26□□□□□ -1.09
CDH1-208ENST00000565810 IPO7O95373 1038 aaKnown RBP8.26□□□□□ -1.09
CDH1-208ENST00000565810 CNPP09543 421 aaKnown RBP8.26□□□□□ -1.09
CDH1-208ENST00000565810 OR4Q2P0C623 313 aa8.26□□□□□ -1.09
CDH1-208ENST00000565810 FAM200BP0CF97 657 aa8.26□□□□□ -1.09
CDH1-208ENST00000565810 RPL17P18621 184 aaKnown RBP8.26□□□□□ -1.09
CDH1-208ENST00000565810 BRD2P25440 801 aaKnown RBP8.26□□□□□ -1.09
CDH1-208ENST00000565810 ANXA13P27216 316 aa8.26□□□□□ -1.09
CDH1-208ENST00000565810 ADORA2BP29275 332 aa8.26□□□□□ -1.09
CDH1-208ENST00000565810 CDK17Q00537 523 aa8.26□□□□□ -1.09
CDH1-208ENST00000565810 CDR2Q01850 454 aa8.26□□□□□ -1.09
CDH1-208ENST00000565810 RAB33AQ14088 237 aa8.26□□□□□ -1.09
CDH1-208ENST00000565810 MEA1Q16626 185 aa8.26□□□□□ -1.09
CDH1-208ENST00000565810 PPP1R26Q5T8A7 1209 aaPredicted RBP8.26□□□□□ -1.09
CDH1-208ENST00000565810 ZNF697Q5TEC3 545 aa8.26□□□□□ -1.09
CDH1-208ENST00000565810 PPP1R2P3Q6NXS1 205 aa8.26□□□□□ -1.09
CDH1-208ENST00000565810 ELMSAN1Q6PJG2 1045 aa8.26□□□□□ -1.09
CDH1-208ENST00000565810 LCLAT1Q6UWP7 414 aa8.26□□□□□ -1.09
CDH1-208ENST00000565810 CYP26C1Q6V0L0 522 aa8.26□□□□□ -1.09
CDH1-208ENST00000565810 TRIM72Q6ZMU5 477 aa8.26□□□□□ -1.09
CDH1-208ENST00000565810 SPRED2Q7Z698 418 aa8.26□□□□□ -1.09
CDH1-208ENST00000565810 LRRTM3Q86VH5 581 aa8.26□□□□□ -1.09
CDH1-208ENST00000565810 GPIHBP1Q8IV16 184 aa8.26□□□□□ -1.09
CDH1-208ENST00000565810 GLYCTKQ8IVS8 523 aa8.26□□□□□ -1.09
CDH1-208ENST00000565810 ANKRD52Q8NB46 1076 aa8.26□□□□□ -1.09
CDH1-208ENST00000565810 TMEM35BQ8NCS4 154 aa8.26□□□□□ -1.09
CDH1-208ENST00000565810 CCDC112Q8NEF3 446 aa8.26□□□□□ -1.09
CDH1-208ENST00000565810 SPPL2BQ8TCT7 592 aa8.26□□□□□ -1.09
CDH1-208ENST00000565810 SLC2A14Q8TDB8 520 aa8.26□□□□□ -1.09
CDH1-208ENST00000565810 EPS8L1Q8TE68 723 aa8.26□□□□□ -1.09
CDH1-208ENST00000565810 PCED1BQ96HM7 432 aa8.26□□□□□ -1.09
CDH1-208ENST00000565810 FUBP3Q96I24 572 aaKnown RBP eCLIP8.26□□□□□ -1.09
CDH1-208ENST00000565810 PGLYRP2Q96PD5 576 aa8.26□□□□□ -1.09
CDH1-208ENST00000565810 NOX5Q96PH1 765 aa8.26□□□□□ -1.09
CDH1-208ENST00000565810 KLHL5Q96PQ7 755 aa8.26□□□□□ -1.09
CDH1-208ENST00000565810 PPP1R9BQ96SB3 815 aa8.26□□□□□ -1.09
CDH1-208ENST00000565810 TMEM209Q96SK2 561 aa8.26□□□□□ -1.09
CDH1-208ENST00000565810 HNRNPABQ99729 332 aaKnown RBP8.26□□□□□ -1.09
CDH1-208ENST00000565810 BAG1Q99933 345 aaPredicted RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms