RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 TMEM86AQ8N2M4 240 aa20.29■□□□□ 0.84
CSPG4P13-201ENST00000565545 SLC4A11Q8NBS3 891 aa20.29■□□□□ 0.84
CSPG4P13-201ENST00000565545 FAM193BQ96PV7 902 aaPredicted RBP20.29■□□□□ 0.84
CSPG4P13-201ENST00000565545 TGS1Q96RS0 853 aaKnown RBP20.29■□□□□ 0.84
CSPG4P13-201ENST00000565545 LACRTQ9GZZ8 138 aa20.29■□□□□ 0.84
CSPG4P13-201ENST00000565545 PUF60Q9UHX1 559 aaKnown RBP20.29■□□□□ 0.84
CSPG4P13-201ENST00000565545 CASTOR2A6NHX0 329 aa20.28■□□□□ 0.84
CSPG4P13-201ENST00000565545 CYB561D2O14569 222 aa20.28■□□□□ 0.84
CSPG4P13-201ENST00000565545 LSM8O95777 96 aaKnown RBP20.28■□□□□ 0.84
CSPG4P13-201ENST00000565545 CYP1A1P04798 512 aaPredicted RBP20.28■□□□□ 0.84
CSPG4P13-201ENST00000565545 TMEM253P0C7T8 217 aa20.28■□□□□ 0.84
CSPG4P13-201ENST00000565545 UNGP13051 313 aaPredicted RBP20.28■□□□□ 0.84
CSPG4P13-201ENST00000565545 WARSP23381 471 aaKnown RBP20.28■□□□□ 0.84
CSPG4P13-201ENST00000565545 ERVK-21P61565 698 aa20.28■□□□□ 0.84
CSPG4P13-201ENST00000565545 ZNF394Q53GI3 561 aa20.28■□□□□ 0.84
CSPG4P13-201ENST00000565545 ACAD10Q6JQN1 1059 aa20.28■□□□□ 0.84
CSPG4P13-201ENST00000565545 CALR3Q96L12 384 aaKnown RBP20.28■□□□□ 0.84
CSPG4P13-201ENST00000565545 MRPL45Q9BRJ2 306 aaKnown RBP20.28■□□□□ 0.84
CSPG4P13-201ENST00000565545 ZNF518BQ9C0D4 1074 aa20.28■□□□□ 0.84
CSPG4P13-201ENST00000565545 ELOVL4Q9GZR5 314 aa20.28■□□□□ 0.84
CSPG4P13-201ENST00000565545 SNX25Q9H3E2 840 aa20.28■□□□□ 0.84
CSPG4P13-201ENST00000565545 TBC1D13Q9NVG8 400 aa20.28■□□□□ 0.84
CSPG4P13-201ENST00000565545 GUCA1BQ9UMX6 200 aa20.28■□□□□ 0.84
CSPG4P13-201ENST00000565545 A0A0A6YYK5 440 aaPredicted RBP20.27■□□□□ 0.84
CSPG4P13-201ENST00000565545 A0A0U1RQJ8 604 aa20.27■□□□□ 0.84
CSPG4P13-201ENST00000565545 TMEM189-UBE2V1I3L0A0 370 aa20.27■□□□□ 0.84
CSPG4P13-201ENST00000565545 FTLP02792 175 aaPredicted RBP20.27■□□□□ 0.84
CSPG4P13-201ENST00000565545 FGFR1P11362 822 aa20.27■□□□□ 0.84
CSPG4P13-201ENST00000565545 CD19P15391 556 aa20.27■□□□□ 0.84
CSPG4P13-201ENST00000565545 GNL1P36915 607 aaPredicted RBP20.27■□□□□ 0.84
CSPG4P13-201ENST00000565545 GALCP54803 685 aa20.27■□□□□ 0.84
CSPG4P13-201ENST00000565545 RNASELQ05823 741 aaKnown RBP20.27■□□□□ 0.84
CSPG4P13-201ENST00000565545 IFI16Q16666 785 aaKnown RBP20.27■□□□□ 0.84
CSPG4P13-201ENST00000565545 SGO2Q562F6 1265 aa20.27■□□□□ 0.84
CSPG4P13-201ENST00000565545 DNTTIP2Q5QJE6 756 aaKnown RBP20.27■□□□□ 0.84
CSPG4P13-201ENST00000565545 DSTYKQ6XUX3 929 aa20.27■□□□□ 0.84
CSPG4P13-201ENST00000565545 PALB2Q86YC2 1186 aa20.27■□□□□ 0.84
CSPG4P13-201ENST00000565545 COLGALT2Q8IYK4 626 aa20.27■□□□□ 0.84
CSPG4P13-201ENST00000565545 OR6B3Q8NGW1 331 aa20.27■□□□□ 0.84
CSPG4P13-201ENST00000565545 ATRIPQ8WXE1 791 aa20.27■□□□□ 0.84
CSPG4P13-201ENST00000565545 CTNNBL1Q8WYA6 563 aaPredicted RBP20.27■□□□□ 0.84
CSPG4P13-201ENST00000565545 TRIM11Q96F44 468 aa20.27■□□□□ 0.84
CSPG4P13-201ENST00000565545 SENP8Q96LD8 212 aa20.27■□□□□ 0.84
CSPG4P13-201ENST00000565545 CASD1Q96PB1 797 aa20.27■□□□□ 0.84
CSPG4P13-201ENST00000565545 LHX5Q9H2C1 402 aa20.27■□□□□ 0.84
CSPG4P13-201ENST00000565545 CEP83Q9Y592 693 aa20.27■□□□□ 0.84
CSPG4P13-201ENST00000565545 LINC01553A4QN01 128 aa20.26■□□□□ 0.83
CSPG4P13-201ENST00000565545 BRD2P25440 801 aaKnown RBP20.26■□□□□ 0.83
CSPG4P13-201ENST00000565545 CDH5P33151 784 aaPredicted RBP20.26■□□□□ 0.83
CSPG4P13-201ENST00000565545 LHX1P48742 406 aa20.26■□□□□ 0.83
CSPG4P13-201ENST00000565545 GNG11P61952 73 aa20.26■□□□□ 0.83
CSPG4P13-201ENST00000565545 CENPCQ03188 943 aa20.26■□□□□ 0.83
CSPG4P13-201ENST00000565545 TCEAL1Q15170 157 aa20.26■□□□□ 0.83
CSPG4P13-201ENST00000565545 CNGA2Q16280 664 aa20.26■□□□□ 0.83
CSPG4P13-201ENST00000565545 ADGRF2Q8IZF7 708 aa20.26■□□□□ 0.83
CSPG4P13-201ENST00000565545 CRYBG2Q8N1P7 616 aa20.26■□□□□ 0.83
CSPG4P13-201ENST00000565545 KBTBD7Q8WVZ9 684 aa20.26■□□□□ 0.83
CSPG4P13-201ENST00000565545 SECISBP2LQ93073 1101 aaKnown RBP20.26■□□□□ 0.83
CSPG4P13-201ENST00000565545 VCPIP1Q96JH7 1222 aa20.26■□□□□ 0.83
CSPG4P13-201ENST00000565545 HEXIM2Q96MH2 286 aaKnown RBP20.26■□□□□ 0.83
CSPG4P13-201ENST00000565545 TWNKQ96RR1 684 aa20.26■□□□□ 0.83
CSPG4P13-201ENST00000565545 PACSIN1Q9BY11 444 aa20.26■□□□□ 0.83
CSPG4P13-201ENST00000565545 DSEQ9UL01 958 aa20.26■□□□□ 0.83
CSPG4P13-201ENST00000565545 L1RE1Q9UN81 338 aa20.26■□□□□ 0.83
CSPG4P13-201ENST00000565545 FNDC1Q4ZHG4 1894 aaPredicted RBP20.26■□□□□ 0.83
CSPG4P13-201ENST00000565545 A8MXQ7 604 aa20.25■□□□□ 0.83
CSPG4P13-201ENST00000565545 TMCO5BA8MYB1 307 aa20.25■□□□□ 0.83
CSPG4P13-201ENST00000565545 B3GAT3O94766 335 aa20.25■□□□□ 0.83
CSPG4P13-201ENST00000565545 DDHD2O94830 711 aa20.25■□□□□ 0.83
CSPG4P13-201ENST00000565545 AMHP03971 560 aa20.25■□□□□ 0.83
CSPG4P13-201ENST00000565545 MYBL1P10243 752 aa20.25■□□□□ 0.83
CSPG4P13-201ENST00000565545 ODC1P11926 461 aa20.25■□□□□ 0.83
CSPG4P13-201ENST00000565545 NSFP46459 744 aaKnown RBP20.25■□□□□ 0.83
CSPG4P13-201ENST00000565545 PDCL2Q8N4E4 241 aa20.25■□□□□ 0.83
CSPG4P13-201ENST00000565545 TMEM35BQ8NCS4 154 aa20.25■□□□□ 0.83
CSPG4P13-201ENST00000565545 C3orf58Q8NDZ4 430 aa20.25■□□□□ 0.83
CSPG4P13-201ENST00000565545 TFAP2BQ92481 460 aa20.25■□□□□ 0.83
CSPG4P13-201ENST00000565545 TNIP3Q96KP6 325 aa20.25■□□□□ 0.83
CSPG4P13-201ENST00000565545 NOX5Q96PH1 765 aa20.25■□□□□ 0.83
CSPG4P13-201ENST00000565545 TMEM175Q9BSA9 504 aa20.25■□□□□ 0.83
CSPG4P13-201ENST00000565545 UBE2ZQ9H832 354 aaPredicted RBP20.25■□□□□ 0.83
CSPG4P13-201ENST00000565545 TAS2R14Q9NYV8 317 aa20.25■□□□□ 0.83
CSPG4P13-201ENST00000565545 HMGXB4Q9UGU5 601 aa20.25■□□□□ 0.83
CSPG4P13-201ENST00000565545 INSL6Q9Y581 213 aa20.25■□□□□ 0.83
CSPG4P13-201ENST00000565545 NCANO14594 1321 aa20.25■□□□□ 0.83
CSPG4P13-201ENST00000565545 M0QZQ0 153 aa20.24■□□□□ 0.83
CSPG4P13-201ENST00000565545 GABRDO14764 452 aa20.24■□□□□ 0.83
CSPG4P13-201ENST00000565545 ABL1P00519 1130 aa20.24■□□□□ 0.83
CSPG4P13-201ENST00000565545 CALCAP01258 141 aa20.24■□□□□ 0.83
CSPG4P13-201ENST00000565545 CYP11A1P05108 521 aa20.24■□□□□ 0.83
CSPG4P13-201ENST00000565545 NOMO3P69849 1222 aa20.24■□□□□ 0.83
CSPG4P13-201ENST00000565545 GPC5P78333 572 aa20.24■□□□□ 0.83
CSPG4P13-201ENST00000565545 TIGD5Q53EQ6 642 aa20.24■□□□□ 0.83
CSPG4P13-201ENST00000565545 ARHGAP17Q68EM7 881 aa20.24■□□□□ 0.83
CSPG4P13-201ENST00000565545 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.24■□□□□ 0.83
CSPG4P13-201ENST00000565545 METTL23Q86XA0 190 aa20.24■□□□□ 0.83
CSPG4P13-201ENST00000565545 ZNF280BQ86YH2 543 aa20.24■□□□□ 0.83
CSPG4P13-201ENST00000565545 PHF13Q86YI8 300 aaPredicted RBP20.24■□□□□ 0.83
CSPG4P13-201ENST00000565545 TRIM58Q8NG06 486 aa20.24■□□□□ 0.83
CSPG4P13-201ENST00000565545 KIF18AQ8NI77 898 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms