RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 DENND4CQ5VZ89 1909 aa14.61□□□□□ -0.07
VPS9D1-204ENST00000565023 ATP2C2O75185 946 aa14.61□□□□□ -0.07
VPS9D1-204ENST00000565023 LRRN2O75325 713 aa14.61□□□□□ -0.07
VPS9D1-204ENST00000565023 CD72P21854 359 aa14.61□□□□□ -0.07
VPS9D1-204ENST00000565023 EPHA5P54756 1037 aa14.61□□□□□ -0.07
VPS9D1-204ENST00000565023 UBE2HP62256 183 aa14.61□□□□□ -0.07
VPS9D1-204ENST00000565023 UBXN2BQ14CS0 331 aa14.61□□□□□ -0.07
VPS9D1-204ENST00000565023 MLF2Q15773 248 aaPredicted RBP14.61□□□□□ -0.07
VPS9D1-204ENST00000565023 SLC44A4Q53GD3 710 aa14.61□□□□□ -0.07
VPS9D1-204ENST00000565023 GPR158Q5T848 1215 aa14.61□□□□□ -0.07
VPS9D1-204ENST00000565023 GAREM2Q75VX8 874 aa14.61□□□□□ -0.07
VPS9D1-204ENST00000565023 SPATA2LQ8IUW3 424 aaPredicted RBP14.61□□□□□ -0.07
VPS9D1-204ENST00000565023 TMEM86AQ8N2M4 240 aa14.61□□□□□ -0.07
VPS9D1-204ENST00000565023 TOP6BLQ8N6T0 577 aa14.61□□□□□ -0.07
VPS9D1-204ENST00000565023 GOLGA5Q8TBA6 731 aa14.61□□□□□ -0.07
VPS9D1-204ENST00000565023 PLEKHO2Q8TD55 490 aa14.61□□□□□ -0.07
VPS9D1-204ENST00000565023 SMARCD2Q92925 531 aa14.61□□□□□ -0.07
VPS9D1-204ENST00000565023 ELSPBP1Q96BH3 223 aa14.61□□□□□ -0.07
VPS9D1-204ENST00000565023 GCNAQ96QF7 691 aa14.61□□□□□ -0.07
VPS9D1-204ENST00000565023 SYT15Q9BQS2 421 aa14.61□□□□□ -0.07
VPS9D1-204ENST00000565023 BRD9Q9H8M2 597 aa14.61□□□□□ -0.07
VPS9D1-204ENST00000565023 HEBP1Q9NRV9 189 aa14.61□□□□□ -0.07
VPS9D1-204ENST00000565023 CGNQ9P2M7 1197 aaKnown RBP14.61□□□□□ -0.07
VPS9D1-204ENST00000565023 NXF1Q9UBU9 619 aaKnown RBP14.61□□□□□ -0.07
VPS9D1-204ENST00000565023 ASB3Q9Y575 518 aa14.61□□□□□ -0.07
VPS9D1-204ENST00000565023 MYBPHLA2RUH7 354 aa14.6□□□□□ -0.07
VPS9D1-204ENST00000565023 LRRIQ3A6PVS8 624 aaPredicted RBP14.6□□□□□ -0.07
VPS9D1-204ENST00000565023 NR3C1P04150 777 aa14.6□□□□□ -0.07
VPS9D1-204ENST00000565023 CYP2F1P24903 491 aa14.6□□□□□ -0.07
VPS9D1-204ENST00000565023 LMO2P25791 158 aa14.6□□□□□ -0.07
VPS9D1-204ENST00000565023 GDI1P31150 447 aa14.6□□□□□ -0.07
VPS9D1-204ENST00000565023 LHX1P48742 406 aa14.6□□□□□ -0.07
VPS9D1-204ENST00000565023 MYL6P60660 151 aa14.6□□□□□ -0.07
VPS9D1-204ENST00000565023 TNNC1P63316 161 aa14.6□□□□□ -0.07
VPS9D1-204ENST00000565023 PFKPQ01813 784 aa14.6□□□□□ -0.07
VPS9D1-204ENST00000565023 SMARCB1Q12824 385 aa14.6□□□□□ -0.07
VPS9D1-204ENST00000565023 NFE2Q16621 373 aaPredicted RBP14.6□□□□□ -0.07
VPS9D1-204ENST00000565023 DDR2Q16832 855 aa14.6□□□□□ -0.07
VPS9D1-204ENST00000565023 ARHGAP15Q53QZ3 475 aa14.6□□□□□ -0.07
VPS9D1-204ENST00000565023 VITQ6UXI7 678 aa14.6□□□□□ -0.07
VPS9D1-204ENST00000565023 TPRG1Q6ZUI0 275 aa14.6□□□□□ -0.07
VPS9D1-204ENST00000565023 C12orf56Q8IXR9 622 aa14.6□□□□□ -0.07
VPS9D1-204ENST00000565023 ELOA2Q8IYF1 753 aaPredicted RBP14.6□□□□□ -0.07
VPS9D1-204ENST00000565023 C2orf15Q8WU43 125 aaKnown RBP14.6□□□□□ -0.07
VPS9D1-204ENST00000565023 ACBD6Q9BR61 282 aa14.6□□□□□ -0.07
VPS9D1-204ENST00000565023 MRPL45Q9BRJ2 306 aaKnown RBP14.6□□□□□ -0.07
VPS9D1-204ENST00000565023 TRMT61BQ9BVS5 477 aaKnown RBP14.6□□□□□ -0.07
VPS9D1-204ENST00000565023 SNX25Q9H3E2 840 aa14.6□□□□□ -0.07
VPS9D1-204ENST00000565023 OBSL1O75147 1896 aa14.6□□□□□ -0.07
VPS9D1-204ENST00000565023 NUP210Q8TEM1 1887 aaPredicted RBP14.6□□□□□ -0.07
VPS9D1-204ENST00000565023 NCANO14594 1321 aa14.6□□□□□ -0.07
VPS9D1-204ENST00000565023 KIF26AQ9ULI4 1882 aaPredicted RBP14.59□□□□□ -0.07
VPS9D1-204ENST00000565023 HEPACAM2A8MVW5 462 aa14.59□□□□□ -0.07
VPS9D1-204ENST00000565023 DPYSL4O14531 572 aa14.59□□□□□ -0.07
VPS9D1-204ENST00000565023 CALUO43852 315 aaPredicted RBP14.59□□□□□ -0.07
VPS9D1-204ENST00000565023 MICAL2O94851 1124 aa14.59□□□□□ -0.07
VPS9D1-204ENST00000565023 RHOBTB3O94955 611 aa14.59□□□□□ -0.07
VPS9D1-204ENST00000565023 PCSK1P29120 753 aa14.59□□□□□ -0.07
VPS9D1-204ENST00000565023 KCNB1Q14721 858 aa14.59□□□□□ -0.07
VPS9D1-204ENST00000565023 WDR72Q3MJ13 1102 aa14.59□□□□□ -0.07
VPS9D1-204ENST00000565023 SCARA5Q6ZMJ2 495 aa14.59□□□□□ -0.07
VPS9D1-204ENST00000565023 YAF2Q8IY57 180 aa14.59□□□□□ -0.07
VPS9D1-204ENST00000565023 SMYD4Q8IYR2 804 aaPredicted RBP14.59□□□□□ -0.07
VPS9D1-204ENST00000565023 DTWD2Q8NBA8 298 aa14.59□□□□□ -0.07
VPS9D1-204ENST00000565023 OR6B3Q8NGW1 331 aa14.59□□□□□ -0.07
VPS9D1-204ENST00000565023 KBTBD7Q8WVZ9 684 aa14.59□□□□□ -0.07
VPS9D1-204ENST00000565023 MYLPFQ96A32 169 aa14.59□□□□□ -0.07
VPS9D1-204ENST00000565023 RSPRY1Q96DX4 576 aa14.59□□□□□ -0.07
VPS9D1-204ENST00000565023 SHDQ96IW2 340 aa14.59□□□□□ -0.07
VPS9D1-204ENST00000565023 SMG9Q9H0W8 520 aaKnown RBP14.59□□□□□ -0.07
VPS9D1-204ENST00000565023 GZF1Q9H116 711 aaPredicted RBP14.59□□□□□ -0.07
VPS9D1-204ENST00000565023 KCTD10Q9H3F6 313 aa14.59□□□□□ -0.07
VPS9D1-204ENST00000565023 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.59□□□□□ -0.07
VPS9D1-204ENST00000565023 HSFX1Q9UBD0 423 aa14.59□□□□□ -0.07
VPS9D1-204ENST00000565023 SIT1Q9Y3P8 196 aa14.59□□□□□ -0.07
VPS9D1-204ENST00000565023 ZFHX2Q9C0A1 2572 aaPredicted RBP14.58□□□□□ -0.08
VPS9D1-204ENST00000565023 PDXKO00764 312 aa14.58□□□□□ -0.08
VPS9D1-204ENST00000565023 GABRDO14764 452 aa14.58□□□□□ -0.08
VPS9D1-204ENST00000565023 ZNF263O14978 683 aa14.58□□□□□ -0.08
VPS9D1-204ENST00000565023 KINO60870 393 aaKnown RBP14.58□□□□□ -0.08
VPS9D1-204ENST00000565023 PSMC3P17980 439 aa14.58□□□□□ -0.08
VPS9D1-204ENST00000565023 CDC25CP30307 473 aa14.58□□□□□ -0.08
VPS9D1-204ENST00000565023 RAP1GAPP47736 663 aa14.58□□□□□ -0.08
VPS9D1-204ENST00000565023 DLG4P78352 724 aa14.58□□□□□ -0.08
VPS9D1-204ENST00000565023 CYP27A1Q02318 531 aa14.58□□□□□ -0.08
VPS9D1-204ENST00000565023 PNOCQ13519 176 aa14.58□□□□□ -0.08
VPS9D1-204ENST00000565023 TDRD10Q5VZ19 366 aaKnown RBP14.58□□□□□ -0.08
VPS9D1-204ENST00000565023 DPH6Q7L8W6 267 aa14.58□□□□□ -0.08
VPS9D1-204ENST00000565023 ARID3BQ8IVW6 561 aaPredicted RBP14.58□□□□□ -0.08
VPS9D1-204ENST00000565023 CCDC105Q8IYK2 499 aa14.58□□□□□ -0.08
VPS9D1-204ENST00000565023 TTC16Q8NEE8 873 aa14.58□□□□□ -0.08
VPS9D1-204ENST00000565023 TTC8Q8TAM2 541 aa14.58□□□□□ -0.08
VPS9D1-204ENST00000565023 SPATA20Q8TB22 786 aa14.58□□□□□ -0.08
VPS9D1-204ENST00000565023 ERCC4Q92889 916 aaPredicted RBP14.58□□□□□ -0.08
VPS9D1-204ENST00000565023 MKNK1Q9BUB5 465 aa14.58□□□□□ -0.08
VPS9D1-204ENST00000565023 GPR88Q9GZN0 384 aa14.58□□□□□ -0.08
VPS9D1-204ENST00000565023 MMRN2Q9H8L6 949 aa14.58□□□□□ -0.08
VPS9D1-204ENST00000565023 IL21Q9HBE4 155 aa14.58□□□□□ -0.08
VPS9D1-204ENST00000565023 CRTAC1Q9NQ79 661 aa14.58□□□□□ -0.08
VPS9D1-204ENST00000565023 HOOK1Q9UJC3 728 aaKnown RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms