RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 PSMC1P62191 440 aaKnown RBP3.52□□□□□ -1.85
CHD9-213ENST00000564845 PRPSAP1Q14558 356 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 C15orf52Q6ZUT6 534 aaKnown RBP3.52□□□□□ -1.85
CHD9-213ENST00000564845 GJD3Q8N144 294 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 FAM163AQ96GL9 167 aaPredicted RBP3.52□□□□□ -1.85
CHD9-213ENST00000564845 VPS39Q96JC1 886 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 GMLQ99445 158 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 CYP39A1Q9NYL5 469 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 NKIRAS1Q9NYS0 192 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 RABL2AQ9UBK7 228 aaPredicted RBP3.52□□□□□ -1.85
CHD9-213ENST00000564845 ZNF214Q9UL59 606 aaPredicted RBP3.52□□□□□ -1.85
CHD9-213ENST00000564845 RABL2BQ9UNT1 228 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 TTLL3Q9Y4R7 772 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 DHX15O43143 795 aaKnown RBP3.52□□□□□ -1.85
CHD9-213ENST00000564845 INHBEP58166 350 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 TNFAIP2Q03169 654 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 RCN2Q14257 317 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 C10orf62Q5T681 223 aaPredicted RBP3.52□□□□□ -1.85
CHD9-213ENST00000564845 SDHAF4Q5VUM1 108 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 TMEM270Q6UE05 265 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 SYDE1Q6ZW31 735 aaPredicted RBP3.52□□□□□ -1.85
CHD9-213ENST00000564845 SYT2Q8N9I0 419 aaPredicted RBP3.52□□□□□ -1.85
CHD9-213ENST00000564845 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.52□□□□□ -1.85
CHD9-213ENST00000564845 LPAR1Q92633 364 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 OLFM1Q99784 485 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 NAT9Q9BTE0 207 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 POLR3FQ9H1D9 316 aaPredicted RBP3.52□□□□□ -1.85
CHD9-213ENST00000564845 FLRT1Q9NZU1 646 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 ARMCX3Q9UH62 379 aaPredicted RBP3.52□□□□□ -1.85
CHD9-213ENST00000564845 GJD2Q9UKL4 321 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 SIK3Q9Y2K2 1263 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 COMMD10Q9Y6G5 202 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 C9IYK1 514 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 SOAT2O75908 522 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 TOP3BO95985 862 aaKnown RBP3.52□□□□□ -1.85
CHD9-213ENST00000564845 CXCL8P10145 99 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 CTGFP29279 349 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 ABCG1P45844 678 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 IFNAR2P48551 515 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 GJA9P57773 515 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 NPNTQ6UXI9 565 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 C1orf186Q6ZWK4 172 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 ZBTB8OSQ8IWT0 167 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 MCPH1Q8NEM0 835 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 THRSPQ92748 146 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 ABTB1Q969K4 478 aaPredicted RBP3.52□□□□□ -1.85
CHD9-213ENST00000564845 ARL8AQ96BM9 186 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 KLRG1Q96E93 195 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 SPATA33Q96N06 139 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 HERC2P3Q9BVR0 1158 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 IDI2Q9BXS1 227 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 ARFGEF1Q9Y6D6 1849 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 EBAG9O00559 213 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 ADCY3O60266 1144 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 UPP2O95045 317 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 EIF2S1P05198 315 aaKnown RBP3.52□□□□□ -1.85
CHD9-213ENST00000564845 ACAT1P24752 427 aaKnown RBP3.52□□□□□ -1.85
CHD9-213ENST00000564845 SERPINB10P48595 397 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 GALCP54803 685 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 CRADDP78560 199 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 GUCY1A3Q02108 690 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 ENPEPQ07075 957 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 LRRC74AQ0VAA2 488 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 ZNF677Q86XU0 584 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 NT5DC4Q86YG4 428 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 TP53INP2Q8IXH6 220 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 ZNF513Q8N8E2 541 aaPredicted RBP3.52□□□□□ -1.85
CHD9-213ENST00000564845 UBLCP1Q8WVY7 318 aaPredicted RBP3.52□□□□□ -1.85
CHD9-213ENST00000564845 BAP1Q92560 729 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 FKBP10Q96AY3 582 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 PAWRQ96IZ0 340 aaKnown RBP3.52□□□□□ -1.85
CHD9-213ENST00000564845 FOPNLQ96NB1 174 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 PTPN18Q99952 460 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 DPEP3Q9H4B8 488 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 PARVGQ9HBI0 331 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 HSPBP1Q9NZL4 362 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 FARP1Q9Y4F1 1045 aaPredicted RBP3.52□□□□□ -1.85
CHD9-213ENST00000564845 RASGRF2O14827 1237 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 NCAM2O15394 837 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 SUN1O94901 812 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 RAG1P15918 1043 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 ZFXP17010 805 aaPredicted RBP3.52□□□□□ -1.85
CHD9-213ENST00000564845 GARSP41250 739 aaKnown RBP3.52□□□□□ -1.85
CHD9-213ENST00000564845 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.52□□□□□ -1.85
CHD9-213ENST00000564845 CYP4F22Q6NT55 531 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 ZNF720Q7Z2F6 126 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 C18orf25Q96B23 403 aaPredicted RBP3.52□□□□□ -1.85
CHD9-213ENST00000564845 ATXN7L3BQ96GX2 97 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 PPP1R36Q96LQ0 422 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 FNBP1Q96RU3 617 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 TBC1D22BQ9NU19 505 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 GPRC5DQ9NZD1 345 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 CPSF2Q9P2I0 782 aaKnown RBP3.52□□□□□ -1.85
CHD9-213ENST00000564845 SLC17A6Q9P2U8 582 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 ZNF180Q9UJW8 692 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 ITM2BQ9Y287 266 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 CTAGE15A4D2H0 777 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 LGALS16A8MUM7 142 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 CTAGE8P0CG41 777 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 TROVE2P10155 538 aaKnown RBP eCLIP3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms