RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 TFAMQ00059 246 aaKnown RBP10.4□□□□□ -0.74
UBFD1-203ENST00000564106 CYP27A1Q02318 531 aa10.4□□□□□ -0.74
UBFD1-203ENST00000564106 CUL2Q13617 745 aa10.4□□□□□ -0.74
UBFD1-203ENST00000564106 TMEM132DQ14C87 1099 aa10.4□□□□□ -0.74
UBFD1-203ENST00000564106 ALKBH5Q6P6C2 394 aaKnown RBP10.4□□□□□ -0.74
UBFD1-203ENST00000564106 FAM43BQ6ZT52 329 aaPredicted RBP10.4□□□□□ -0.74
UBFD1-203ENST00000564106 ZNF571Q7Z3V5 609 aaPredicted RBP10.4□□□□□ -0.74
UBFD1-203ENST00000564106 TMC7Q7Z402 723 aa10.4□□□□□ -0.74
UBFD1-203ENST00000564106 ABI1Q8IZP0 508 aa10.4□□□□□ -0.74
UBFD1-203ENST00000564106 VPS52Q8N1B4 723 aa10.4□□□□□ -0.74
UBFD1-203ENST00000564106 TTC39CQ8N584 583 aa10.4□□□□□ -0.74
UBFD1-203ENST00000564106 MRPL43Q8N983 215 aaKnown RBP10.4□□□□□ -0.74
UBFD1-203ENST00000564106 SLC22A17Q8WUG5 538 aa10.4□□□□□ -0.74
UBFD1-203ENST00000564106 B3GALT6Q96L58 329 aa10.4□□□□□ -0.74
UBFD1-203ENST00000564106 NOX5Q96PH1 765 aa10.4□□□□□ -0.74
UBFD1-203ENST00000564106 MTMR12Q9C0I1 747 aa10.4□□□□□ -0.74
UBFD1-203ENST00000564106 NIF3L1Q9GZT8 377 aa10.4□□□□□ -0.74
UBFD1-203ENST00000564106 NXF3Q9H4D5 531 aaKnown RBP10.4□□□□□ -0.74
UBFD1-203ENST00000564106 POMKQ9H5K3 350 aa10.4□□□□□ -0.74
UBFD1-203ENST00000564106 NAGPAQ9UK23 515 aa10.4□□□□□ -0.74
UBFD1-203ENST00000564106 AJAP1Q9UKB5 411 aaPredicted RBP10.4□□□□□ -0.74
UBFD1-203ENST00000564106 ITGA11Q9UKX5 1188 aa10.4□□□□□ -0.74
UBFD1-203ENST00000564106 IPPQ9Y573 584 aa10.4□□□□□ -0.74
UBFD1-203ENST00000564106 TRIP11Q15643 1979 aa10.39□□□□□ -0.75
UBFD1-203ENST00000564106 VWA8A3KMH1 1905 aa10.39□□□□□ -0.75
UBFD1-203ENST00000564106 A0A0A6YYK5 440 aaPredicted RBP10.39□□□□□ -0.75
UBFD1-203ENST00000564106 PRR33A8MZF0 331 aa10.39□□□□□ -0.75
UBFD1-203ENST00000564106 FOXN3O00409 490 aaPredicted RBP10.39□□□□□ -0.75
UBFD1-203ENST00000564106 ZNF263O14978 683 aa10.39□□□□□ -0.75
UBFD1-203ENST00000564106 LILRB3O75022 631 aa10.39□□□□□ -0.75
UBFD1-203ENST00000564106 VNN1O95497 513 aa10.39□□□□□ -0.75
UBFD1-203ENST00000564106 STAU1O95793 577 aaKnown RBP10.39□□□□□ -0.75
UBFD1-203ENST00000564106 PDGFBP01127 241 aaPredicted RBP10.39□□□□□ -0.75
UBFD1-203ENST00000564106 MLH1P40692 756 aa10.39□□□□□ -0.75
UBFD1-203ENST00000564106 USP8P40818 1118 aa10.39□□□□□ -0.75
UBFD1-203ENST00000564106 SCNN1GP51170 649 aa10.39□□□□□ -0.75
UBFD1-203ENST00000564106 OSTNP61366 133 aa10.39□□□□□ -0.75
UBFD1-203ENST00000564106 ZNF699Q32M78 642 aa10.39□□□□□ -0.75
UBFD1-203ENST00000564106 SEZ6Q53EL9 994 aa10.39□□□□□ -0.75
UBFD1-203ENST00000564106 ZNF569Q5MCW4 686 aa10.39□□□□□ -0.75
UBFD1-203ENST00000564106 IER5LQ5T953 404 aa10.39□□□□□ -0.75
UBFD1-203ENST00000564106 LMBRD2Q68DH5 695 aaPredicted RBP10.39□□□□□ -0.75
UBFD1-203ENST00000564106 TMEM130Q8N3G9 435 aa10.39□□□□□ -0.75
UBFD1-203ENST00000564106 CEP120Q8N960 986 aa10.39□□□□□ -0.75
UBFD1-203ENST00000564106 OR5B17Q8NGF7 314 aa10.39□□□□□ -0.75
UBFD1-203ENST00000564106 EPS8L1Q8TE68 723 aa10.39□□□□□ -0.75
UBFD1-203ENST00000564106 UBE2Q2Q8WVN8 375 aa10.39□□□□□ -0.75
UBFD1-203ENST00000564106 CTNNBL1Q8WYA6 563 aaPredicted RBP10.39□□□□□ -0.75
UBFD1-203ENST00000564106 KREMEN1Q96MU8 473 aa10.39□□□□□ -0.75
UBFD1-203ENST00000564106 GAD1Q99259 594 aa10.39□□□□□ -0.75
UBFD1-203ENST00000564106 PHOX2BQ99453 314 aa10.39□□□□□ -0.75
UBFD1-203ENST00000564106 NAPGQ99747 312 aaPredicted RBP10.39□□□□□ -0.75
UBFD1-203ENST00000564106 AGPAT1Q99943 283 aa10.39□□□□□ -0.75
UBFD1-203ENST00000564106 PAAF1Q9BRP4 392 aa10.39□□□□□ -0.75
UBFD1-203ENST00000564106 APOL6Q9BWW8 343 aa10.39□□□□□ -0.75
UBFD1-203ENST00000564106 PHF7Q9BWX1 381 aaPredicted RBP10.39□□□□□ -0.75
UBFD1-203ENST00000564106 RSAD1Q9HA92 442 aa10.39□□□□□ -0.75
UBFD1-203ENST00000564106 PRG3Q9Y2Y8 225 aaPredicted RBP10.39□□□□□ -0.75
UBFD1-203ENST00000564106 PIEZO1Q92508 2521 aa10.39□□□□□ -0.75
UBFD1-203ENST00000564106 COL4A3Q01955 1670 aa10.38□□□□□ -0.75
UBFD1-203ENST00000564106 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.38□□□□□ -0.75
UBFD1-203ENST00000564106 LACTBL1A8MY62 500 aa10.38□□□□□ -0.75
UBFD1-203ENST00000564106 C2CD4DB7Z1M9 353 aa10.38□□□□□ -0.75
UBFD1-203ENST00000564106 NRP1O14786 923 aa10.38□□□□□ -0.75
UBFD1-203ENST00000564106 NPTXRO95502 500 aa10.38□□□□□ -0.75
UBFD1-203ENST00000564106 CXCL14O95715 111 aa10.38□□□□□ -0.75
UBFD1-203ENST00000564106 H2AFZP0C0S5 128 aa10.38□□□□□ -0.75
UBFD1-203ENST00000564106 CTSAP10619 480 aa10.38□□□□□ -0.75
UBFD1-203ENST00000564106 GZMAP12544 262 aa10.38□□□□□ -0.75
UBFD1-203ENST00000564106 KRT5P13647 590 aa10.38□□□□□ -0.75
UBFD1-203ENST00000564106 CYP11B1P15538 503 aa10.38□□□□□ -0.75
UBFD1-203ENST00000564106 AKAP5P24588 427 aa10.38□□□□□ -0.75
UBFD1-203ENST00000564106 PPM1AP35813 382 aa10.38□□□□□ -0.75
UBFD1-203ENST00000564106 DSC1Q08554 894 aa10.38□□□□□ -0.75
UBFD1-203ENST00000564106 SMC1AQ14683 1233 aaKnown RBP10.38□□□□□ -0.75
UBFD1-203ENST00000564106 ZNF667Q5HYK9 610 aa10.38□□□□□ -0.75
UBFD1-203ENST00000564106 RARS2Q5T160 578 aaKnown RBP10.38□□□□□ -0.75
UBFD1-203ENST00000564106 GLB1LQ6UWU2 654 aa10.38□□□□□ -0.75
UBFD1-203ENST00000564106 TRIM72Q6ZMU5 477 aa10.38□□□□□ -0.75
UBFD1-203ENST00000564106 H2AFVQ71UI9 128 aa10.38□□□□□ -0.75
UBFD1-203ENST00000564106 DDX53Q86TM3 631 aaKnown RBP10.38□□□□□ -0.75
UBFD1-203ENST00000564106 EFCAB13Q8IY85 973 aa10.38□□□□□ -0.75
UBFD1-203ENST00000564106 COLGALT2Q8IYK4 626 aa10.38□□□□□ -0.75
UBFD1-203ENST00000564106 RNF168Q8IYW5 571 aaPredicted RBP10.38□□□□□ -0.75
UBFD1-203ENST00000564106 MYRIPQ8NFW9 859 aa10.38□□□□□ -0.75
UBFD1-203ENST00000564106 SLC30A5Q8TAD4 765 aa10.38□□□□□ -0.75
UBFD1-203ENST00000564106 CDCA3Q99618 268 aaPredicted RBP10.38□□□□□ -0.75
UBFD1-203ENST00000564106 SYT11Q9BT88 431 aa10.38□□□□□ -0.75
UBFD1-203ENST00000564106 MRPL9Q9BYD2 267 aaKnown RBP10.38□□□□□ -0.75
UBFD1-203ENST00000564106 DNAI2Q9GZS0 605 aa10.38□□□□□ -0.75
UBFD1-203ENST00000564106 VRTNQ9H8Y1 702 aa10.38□□□□□ -0.75
UBFD1-203ENST00000564106 L2HGDHQ9H9P8 463 aa10.38□□□□□ -0.75
UBFD1-203ENST00000564106 KLK14Q9P0G3 267 aa10.38□□□□□ -0.75
UBFD1-203ENST00000564106 CNTN6Q9UQ52 1028 aa10.38□□□□□ -0.75
UBFD1-203ENST00000564106 DOCK8Q8NF50 2099 aa10.37□□□□□ -0.75
UBFD1-203ENST00000564106 MACROD2A1Z1Q3 448 aa10.37□□□□□ -0.75
UBFD1-203ENST00000564106 ANKRD62A6NC57 917 aa10.37□□□□□ -0.75
UBFD1-203ENST00000564106 ARL5CA6NH57 179 aa10.37□□□□□ -0.75
UBFD1-203ENST00000564106 INPPL1O15357 1258 aa10.37□□□□□ -0.75
UBFD1-203ENST00000564106 RTN2O75298 545 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms