RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 VWA8A3KMH1 1905 aa23.28■■□□□ 1.32
LINC01960-201ENST00000563759 GABRDO14764 452 aa23.27■■□□□ 1.32
LINC01960-201ENST00000563759 CYP1A2P05177 515 aa23.27■■□□□ 1.32
LINC01960-201ENST00000563759 C1QBPQ07021 282 aaKnown RBP23.27■■□□□ 1.32
LINC01960-201ENST00000563759 METTL23Q86XA0 190 aa23.27■■□□□ 1.32
LINC01960-201ENST00000563759 CRYBG2Q8N1P7 616 aa23.27■■□□□ 1.32
LINC01960-201ENST00000563759 LRRC43Q8N309 656 aa23.27■■□□□ 1.32
LINC01960-201ENST00000563759 B3GALNT2Q8NCR0 500 aa23.27■■□□□ 1.32
LINC01960-201ENST00000563759 TPCN2Q8NHX9 752 aa23.27■■□□□ 1.32
LINC01960-201ENST00000563759 VCPIP1Q96JH7 1222 aa23.27■■□□□ 1.32
LINC01960-201ENST00000563759 CHORDC1Q9UHD1 332 aaPredicted RBP23.27■■□□□ 1.32
LINC01960-201ENST00000563759 DSEQ9UL01 958 aa23.27■■□□□ 1.32
LINC01960-201ENST00000563759 PTPRSQ13332 1948 aa23.27■■□□□ 1.32
LINC01960-201ENST00000563759 GRID2IPA4D2P6 1211 aa23.26■■□□□ 1.31
LINC01960-201ENST00000563759 TMEM189-UBE2V1I3L0A0 370 aa23.26■■□□□ 1.31
LINC01960-201ENST00000563759 M0QZQ0 153 aa23.26■■□□□ 1.31
LINC01960-201ENST00000563759 ENC1O14682 589 aa23.26■■□□□ 1.31
LINC01960-201ENST00000563759 URI1O94763 535 aaPredicted RBP23.26■■□□□ 1.31
LINC01960-201ENST00000563759 MMP8P22894 467 aa23.26■■□□□ 1.31
LINC01960-201ENST00000563759 RRM1P23921 792 aa23.26■■□□□ 1.31
LINC01960-201ENST00000563759 ACAT1P24752 427 aaKnown RBP23.26■■□□□ 1.31
LINC01960-201ENST00000563759 PSMC1P62191 440 aaKnown RBP23.26■■□□□ 1.31
LINC01960-201ENST00000563759 CD300LGQ6UXG3 332 aa23.26■■□□□ 1.31
LINC01960-201ENST00000563759 SUSD3Q96L08 255 aa23.26■■□□□ 1.31
LINC01960-201ENST00000563759 NUP85Q9BW27 656 aa23.26■■□□□ 1.31
LINC01960-201ENST00000563759 NRDE2Q9H7Z3 1164 aa23.26■■□□□ 1.31
LINC01960-201ENST00000563759 PCDH10Q9P2E7 1040 aa23.26■■□□□ 1.31
LINC01960-201ENST00000563759 HESX1Q9UBX0 185 aa23.26■■□□□ 1.31
LINC01960-201ENST00000563759 COG5Q9UP83 839 aa23.26■■□□□ 1.31
LINC01960-201ENST00000563759 JRKLQ9Y4A0 524 aa23.26■■□□□ 1.31
LINC01960-201ENST00000563759 AMHP03971 560 aa23.26■■□□□ 1.31
LINC01960-201ENST00000563759 CALB1P05937 261 aa23.26■■□□□ 1.31
LINC01960-201ENST00000563759 ERICH1Q86X53 443 aa23.26■■□□□ 1.31
LINC01960-201ENST00000563759 WDTC1Q8N5D0 677 aa23.26■■□□□ 1.31
LINC01960-201ENST00000563759 MSANTD4Q8NCY6 345 aa23.26■■□□□ 1.31
LINC01960-201ENST00000563759 AVENQ9NQS1 362 aaPredicted RBP23.26■■□□□ 1.31
LINC01960-201ENST00000563759 UVRAGQ9P2Y5 699 aa23.26■■□□□ 1.31
LINC01960-201ENST00000563759 EFCAB14O75071 495 aa23.25■■□□□ 1.31
LINC01960-201ENST00000563759 ACRP10323 421 aa23.25■■□□□ 1.31
LINC01960-201ENST00000563759 CCDC130P13994 396 aa23.25■■□□□ 1.31
LINC01960-201ENST00000563759 ARHGAP17Q68EM7 881 aa23.25■■□□□ 1.31
LINC01960-201ENST00000563759 DAAM2Q86T65 1068 aa23.25■■□□□ 1.31
LINC01960-201ENST00000563759 UBA3Q8TBC4 463 aa23.25■■□□□ 1.31
LINC01960-201ENST00000563759 ZNF564Q8TBZ8 553 aaPredicted RBP23.25■■□□□ 1.31
LINC01960-201ENST00000563759 CALR3Q96L12 384 aaKnown RBP23.25■■□□□ 1.31
LINC01960-201ENST00000563759 LPIN3Q9BQK8 851 aa23.25■■□□□ 1.31
LINC01960-201ENST00000563759 SYNCQ9H7C4 482 aa23.25■■□□□ 1.31
LINC01960-201ENST00000563759 PHLDB2Q86SQ0 1253 aa23.24■■□□□ 1.31
LINC01960-201ENST00000563759 SPATA18Q8TC71 538 aa23.24■■□□□ 1.31
LINC01960-201ENST00000563759 SYT15Q9BQS2 421 aa23.24■■□□□ 1.31
LINC01960-201ENST00000563759 HCSTQ9UBK5 93 aa23.24■■□□□ 1.31
LINC01960-201ENST00000563759 TRAPPC3O43617 180 aa23.24■■□□□ 1.31
LINC01960-201ENST00000563759 FTCDO95954 541 aa23.24■■□□□ 1.31
LINC01960-201ENST00000563759 ATP1A1P05023 1023 aaKnown RBP23.24■■□□□ 1.31
LINC01960-201ENST00000563759 CYP11A1P05108 521 aa23.24■■□□□ 1.31
LINC01960-201ENST00000563759 PCSK1P29120 753 aa23.24■■□□□ 1.31
LINC01960-201ENST00000563759 ADORA2BP29275 332 aa23.24■■□□□ 1.31
LINC01960-201ENST00000563759 HADHBP55084 474 aaKnown RBP23.24■■□□□ 1.31
LINC01960-201ENST00000563759 PTP4A2Q12974 167 aa23.24■■□□□ 1.31
LINC01960-201ENST00000563759 PDCLQ13371 301 aa23.24■■□□□ 1.31
LINC01960-201ENST00000563759 TCEAL1Q15170 157 aa23.24■■□□□ 1.31
LINC01960-201ENST00000563759 PTPN20Q4JDL3 420 aa23.24■■□□□ 1.31
LINC01960-201ENST00000563759 SYCE1Q8N0S2 351 aa23.24■■□□□ 1.31
LINC01960-201ENST00000563759 GOLPH3Q9H4A6 298 aa23.24■■□□□ 1.31
LINC01960-201ENST00000563759 CYTH4Q9UIA0 394 aa23.24■■□□□ 1.31
LINC01960-201ENST00000563759 STRIP2Q9ULQ0 834 aa23.24■■□□□ 1.31
LINC01960-201ENST00000563759 SCINQ9Y6U3 715 aa23.24■■□□□ 1.31
LINC01960-201ENST00000563759 COL4A6Q14031 1691 aa23.23■■□□□ 1.31
LINC01960-201ENST00000563759 NRP1O14786 923 aa23.23■■□□□ 1.31
LINC01960-201ENST00000563759 ATP2C2O75185 946 aa23.23■■□□□ 1.31
LINC01960-201ENST00000563759 TADA2AO75478 443 aa23.23■■□□□ 1.31
LINC01960-201ENST00000563759 PTPN1P18031 435 aaKnown RBP23.23■■□□□ 1.31
LINC01960-201ENST00000563759 GPD2P43304 727 aa23.23■■□□□ 1.31
LINC01960-201ENST00000563759 WDR5P61964 334 aaKnown RBP23.23■■□□□ 1.31
LINC01960-201ENST00000563759 OVOS1Q6IE37 1185 aa23.23■■□□□ 1.31
LINC01960-201ENST00000563759 LRRC57Q8N9N7 239 aa23.23■■□□□ 1.31
LINC01960-201ENST00000563759 SLC2A14Q8TDB8 520 aa23.23■■□□□ 1.31
LINC01960-201ENST00000563759 IL23AQ9NPF7 189 aa23.23■■□□□ 1.31
LINC01960-201ENST00000563759 ADAM28Q9UKQ2 775 aa23.23■■□□□ 1.31
LINC01960-201ENST00000563759 PCDHB8Q9UN66 801 aa23.23■■□□□ 1.31
LINC01960-201ENST00000563759 PTPRDP23468 1912 aa23.23■■□□□ 1.31
LINC01960-201ENST00000563759 BUB1BO60566 1050 aaPredicted RBP23.22■■□□□ 1.31
LINC01960-201ENST00000563759 DGKIO75912 1065 aa23.22■■□□□ 1.31
LINC01960-201ENST00000563759 MTA2O94776 668 aa23.22■■□□□ 1.31
LINC01960-201ENST00000563759 BAIAP3O94812 1187 aa23.22■■□□□ 1.31
LINC01960-201ENST00000563759 ALDH2P05091 517 aa23.22■■□□□ 1.31
LINC01960-201ENST00000563759 TYMPP19971 482 aa23.22■■□□□ 1.31
LINC01960-201ENST00000563759 DEFB103AP81534 67 aa23.22■■□□□ 1.31
LINC01960-201ENST00000563759 MDH1BQ5I0G3 518 aa23.22■■□□□ 1.31
LINC01960-201ENST00000563759 CYP4A22Q5TCH4 519 aa23.22■■□□□ 1.31
LINC01960-201ENST00000563759 LLGL2Q6P1M3 1020 aa23.22■■□□□ 1.31
LINC01960-201ENST00000563759 TTC30AQ86WT1 665 aa23.22■■□□□ 1.31
LINC01960-201ENST00000563759 C7orf61Q8IZ16 206 aa23.22■■□□□ 1.31
LINC01960-201ENST00000563759 IPO4Q8TEX9 1081 aaKnown RBP23.22■■□□□ 1.31
LINC01960-201ENST00000563759 TOP1MTQ969P6 601 aa23.22■■□□□ 1.31
LINC01960-201ENST00000563759 TMEM175Q9BSA9 504 aa23.22■■□□□ 1.31
LINC01960-201ENST00000563759 COLEC11Q9BWP8 271 aa23.22■■□□□ 1.31
LINC01960-201ENST00000563759 MRPL47Q9HD33 250 aaKnown RBP23.22■■□□□ 1.31
LINC01960-201ENST00000563759 ST7Q9NRC1 585 aa23.22■■□□□ 1.31
LINC01960-201ENST00000563759 CDH9Q9ULB4 789 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms