RNA–Protein interactions for RNA: ENST00000563553.1

LINC01416-201, Transcript of long intergenic non-protein coding RNA 1416, humanhuman

TSL 1 (best) BASIC

Gene LINC01416, Length 2,310 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01416-201ENST00000563553 ZCCHC17Q9NP64 241 aaKnown RBP3.9□□□□□ -1.79
LINC01416-201ENST00000563553 MSRAQ9UJ68 235 aa3.9□□□□□ -1.79
LINC01416-201ENST00000563553 PPP2R3BQ9Y5P8 575 aa3.9□□□□□ -1.79
LINC01416-201ENST00000563553 NPHP4O75161 1426 aaPredicted RBP3.9□□□□□ -1.79
LINC01416-201ENST00000563553 CRB1P82279 1406 aa3.9□□□□□ -1.79
LINC01416-201ENST00000563553 NCAPD2Q15021 1401 aa3.9□□□□□ -1.79
LINC01416-201ENST00000563553 COL4A3Q01955 1670 aa3.89□□□□□ -1.79
LINC01416-201ENST00000563553 PRSS38A1L453 326 aa3.89□□□□□ -1.79
LINC01416-201ENST00000563553 H0YHG0 523 aa3.89□□□□□ -1.79
LINC01416-201ENST00000563553 DAPK3O43293 454 aa3.89□□□□□ -1.79
LINC01416-201ENST00000563553 KIF5CO60282 957 aa3.89□□□□□ -1.79
LINC01416-201ENST00000563553 IPO13O94829 963 aaKnown RBP3.89□□□□□ -1.79
LINC01416-201ENST00000563553 KIAA0754O94854 1291 aa3.89□□□□□ -1.79
LINC01416-201ENST00000563553 LARGE1O95461 756 aa3.89□□□□□ -1.79
LINC01416-201ENST00000563553 HMGB1P09429 215 aaKnown RBP3.89□□□□□ -1.79
LINC01416-201ENST00000563553 CCDC175P0C221 793 aa3.89□□□□□ -1.79
LINC01416-201ENST00000563553 EPB41P11171 864 aaKnown RBP3.89□□□□□ -1.79
LINC01416-201ENST00000563553 TOP1P11387 765 aaKnown RBP3.89□□□□□ -1.79
LINC01416-201ENST00000563553 SLC8A1P32418 973 aa3.89□□□□□ -1.79
LINC01416-201ENST00000563553 PTGS2P35354 604 aa3.89□□□□□ -1.79
LINC01416-201ENST00000563553 FLT3P36888 993 aa3.89□□□□□ -1.79
LINC01416-201ENST00000563553 GNG11P61952 73 aa3.89□□□□□ -1.79
LINC01416-201ENST00000563553 PHC1P78364 1004 aa3.89□□□□□ -1.79
LINC01416-201ENST00000563553 MYL5Q02045 173 aa3.89□□□□□ -1.79
LINC01416-201ENST00000563553 GPR158Q5T848 1215 aa3.89□□□□□ -1.79
LINC01416-201ENST00000563553 ISM2Q6H9L7 571 aa3.89□□□□□ -1.79
LINC01416-201ENST00000563553 TIGD7Q6NT04 549 aaPredicted RBP3.89□□□□□ -1.79
LINC01416-201ENST00000563553 BLOC1S2Q6QNY1 142 aa3.89□□□□□ -1.79
LINC01416-201ENST00000563553 SYT12Q8IV01 421 aa3.89□□□□□ -1.79
LINC01416-201ENST00000563553 TMEM139Q8IV31 216 aa3.89□□□□□ -1.79
LINC01416-201ENST00000563553 ZZZ3Q8IYH5 903 aa3.89□□□□□ -1.79
LINC01416-201ENST00000563553 FAM76AQ8TAV0 307 aa3.89□□□□□ -1.79
LINC01416-201ENST00000563553 HAS1Q92839 578 aa3.89□□□□□ -1.79
LINC01416-201ENST00000563553 MAP4K1Q92918 833 aa3.89□□□□□ -1.79
LINC01416-201ENST00000563553 ITFG2Q969R8 447 aa3.89□□□□□ -1.79
LINC01416-201ENST00000563553 EVI5LQ96CN4 794 aa3.89□□□□□ -1.79
LINC01416-201ENST00000563553 HIST1H2AHQ96KK5 128 aa3.89□□□□□ -1.79
LINC01416-201ENST00000563553 HIST1H2AJQ99878 128 aa3.89□□□□□ -1.79
LINC01416-201ENST00000563553 BAG1Q99933 345 aaPredicted RBP3.89□□□□□ -1.79
LINC01416-201ENST00000563553 SH3GL3Q99963 347 aa3.89□□□□□ -1.79
LINC01416-201ENST00000563553 TARS2Q9BW92 718 aaKnown RBP3.89□□□□□ -1.79
LINC01416-201ENST00000563553 TEX13AQ9BXU3 409 aaPredicted RBP3.89□□□□□ -1.79
LINC01416-201ENST00000563553 FAM204AQ9H8W3 233 aa3.89□□□□□ -1.79
LINC01416-201ENST00000563553 IFNKQ9P0W0 207 aa3.89□□□□□ -1.79
LINC01416-201ENST00000563553 KCNG1Q9UIX4 513 aa3.89□□□□□ -1.79
LINC01416-201ENST00000563553 TPCN1Q9ULQ1 816 aa3.89□□□□□ -1.79
LINC01416-201ENST00000563553 FZD1Q9UP38 647 aa3.89□□□□□ -1.79
LINC01416-201ENST00000563553 CHST2Q9Y4C5 530 aa3.89□□□□□ -1.79
LINC01416-201ENST00000563553 FAM169AQ9Y6X4 670 aa3.89□□□□□ -1.79
LINC01416-201ENST00000563553 ANKARQ7Z5J8 1434 aa3.89□□□□□ -1.79
LINC01416-201ENST00000563553 TSPOAP1O95153 1857 aa3.89□□□□□ -1.79
LINC01416-201ENST00000563553 CDHR2Q9BYE9 1310 aa3.89□□□□□ -1.79
LINC01416-201ENST00000563553 FAM237AA0A1B0GTK4 181 aa3.89□□□□□ -1.79
LINC01416-201ENST00000563553 GOLGA6L7A0A1B0GV03 622 aa3.89□□□□□ -1.79
LINC01416-201ENST00000563553 CTAGE15A4D2H0 777 aa3.89□□□□□ -1.79
LINC01416-201ENST00000563553 H3BQV1 296 aa3.89□□□□□ -1.79
LINC01416-201ENST00000563553 EXOC5O00471 708 aa3.89□□□□□ -1.79
LINC01416-201ENST00000563553 LIN7AO14910 233 aaPredicted RBP3.89□□□□□ -1.79
LINC01416-201ENST00000563553 NPHP1O15259 732 aa3.89□□□□□ -1.79
LINC01416-201ENST00000563553 EIF3HO15372 352 aaKnown RBP eCLIP3.89□□□□□ -1.79
LINC01416-201ENST00000563553 MFAP3LO75121 409 aa3.89□□□□□ -1.79
LINC01416-201ENST00000563553 CTAGE8P0CG41 777 aa3.89□□□□□ -1.79
LINC01416-201ENST00000563553 CD40P25942 277 aa3.89□□□□□ -1.79
LINC01416-201ENST00000563553 CKAP4Q07065 602 aaKnown RBP3.89□□□□□ -1.79
LINC01416-201ENST00000563553 TRIM25Q14258 630 aaKnown RBP3.89□□□□□ -1.79
LINC01416-201ENST00000563553 KCNV1Q6PIU1 500 aa3.89□□□□□ -1.79
LINC01416-201ENST00000563553 GPRIN1Q7Z2K8 1008 aa3.89□□□□□ -1.79
LINC01416-201ENST00000563553 CTAGE6Q86UF2 777 aa3.89□□□□□ -1.79
LINC01416-201ENST00000563553 CTAGE4Q8IX94 777 aa3.89□□□□□ -1.79
LINC01416-201ENST00000563553 CDYL2Q8N8U2 506 aa3.89□□□□□ -1.79
LINC01416-201ENST00000563553 MAB21L3Q8N8X9 362 aa3.89□□□□□ -1.79
LINC01416-201ENST00000563553 NTN5Q8WTR8 489 aaPredicted RBP3.89□□□□□ -1.79
LINC01416-201ENST00000563553 ZBTB9Q96C00 473 aa3.89□□□□□ -1.79
LINC01416-201ENST00000563553 UIMC1Q96RL1 719 aa3.89□□□□□ -1.79
LINC01416-201ENST00000563553 MOV10L1Q9BXT6 1211 aaKnown RBP3.89□□□□□ -1.79
LINC01416-201ENST00000563553 TMX4Q9H1E5 349 aaPredicted RBP3.89□□□□□ -1.79
LINC01416-201ENST00000563553 ATP6V0A4Q9HBG4 840 aa3.89□□□□□ -1.79
LINC01416-201ENST00000563553 DKK2Q9UBU2 259 aa3.89□□□□□ -1.79
LINC01416-201ENST00000563553 EVLQ9UI08 416 aaPredicted RBP3.89□□□□□ -1.79
LINC01416-201ENST00000563553 TUBE1Q9UJT0 475 aa3.89□□□□□ -1.79
LINC01416-201ENST00000563553 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.89□□□□□ -1.79
LINC01416-201ENST00000563553 SORCS3Q9UPU3 1222 aa3.89□□□□□ -1.79
LINC01416-201ENST00000563553 MRC1P22897 1456 aa3.89□□□□□ -1.79
LINC01416-201ENST00000563553 MLH3Q9UHC1 1453 aa3.89□□□□□ -1.79
LINC01416-201ENST00000563553 MED23Q9ULK4 1368 aa3.88□□□□□ -1.79
LINC01416-201ENST00000563553 CTAGE9A4FU28 777 aa3.88□□□□□ -1.79
LINC01416-201ENST00000563553 PFKFB2O60825 505 aa3.88□□□□□ -1.79
LINC01416-201ENST00000563553 TMEM127O75204 238 aa3.88□□□□□ -1.79
LINC01416-201ENST00000563553 WDHD1O75717 1129 aaPredicted RBP3.88□□□□□ -1.79
LINC01416-201ENST00000563553 ITGB1P05556 798 aa3.88□□□□□ -1.79
LINC01416-201ENST00000563553 ADCYAP1R1P41586 468 aa3.88□□□□□ -1.79
LINC01416-201ENST00000563553 FNTAP49354 379 aa3.88□□□□□ -1.79
LINC01416-201ENST00000563553 UBASH3AP57075 661 aa3.88□□□□□ -1.79
LINC01416-201ENST00000563553 ITIH3Q06033 890 aa3.88□□□□□ -1.79
LINC01416-201ENST00000563553 FSTL1Q12841 308 aa3.88□□□□□ -1.79
LINC01416-201ENST00000563553 GRIK3Q13003 919 aa3.88□□□□□ -1.79
LINC01416-201ENST00000563553 MRPL49Q13405 166 aaKnown RBP3.88□□□□□ -1.79
LINC01416-201ENST00000563553 MTX1Q13505 466 aa3.88□□□□□ -1.79
LINC01416-201ENST00000563553 PDCD2Q16342 344 aaPredicted RBP3.88□□□□□ -1.79
LINC01416-201ENST00000563553 SYNPOQ8N3V7 929 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms