RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 SPATA18Q8TC71 538 aa10.79□□□□□ -0.68
SMG1-208ENST00000563448 BCL7CQ8WUZ0 217 aaPredicted RBP10.79□□□□□ -0.68
SMG1-208ENST00000563448 UBE2Q2Q8WVN8 375 aa10.79□□□□□ -0.68
SMG1-208ENST00000563448 DPF3Q92784 378 aa10.79□□□□□ -0.68
SMG1-208ENST00000563448 ARHGEF26Q96DR7 871 aa10.79□□□□□ -0.68
SMG1-208ENST00000563448 TSGA10Q9BZW7 698 aa10.79□□□□□ -0.68
SMG1-208ENST00000563448 THAP2Q9H0W7 228 aa10.79□□□□□ -0.68
SMG1-208ENST00000563448 LHX5Q9H2C1 402 aa10.79□□□□□ -0.68
SMG1-208ENST00000563448 FAM49BQ9NUQ9 324 aa10.79□□□□□ -0.68
SMG1-208ENST00000563448 CXXC1Q9P0U4 656 aaPredicted RBP10.79□□□□□ -0.68
SMG1-208ENST00000563448 TSPAN16Q9UKR8 245 aa10.79□□□□□ -0.68
SMG1-208ENST00000563448 ZNF638Q14966 1978 aaKnown RBP10.79□□□□□ -0.68
SMG1-208ENST00000563448 TMEM253P0C7T8 217 aa10.79□□□□□ -0.68
SMG1-208ENST00000563448 PTPN1P18031 435 aaKnown RBP10.79□□□□□ -0.68
SMG1-208ENST00000563448 TKTP29401 623 aaKnown RBP10.79□□□□□ -0.68
SMG1-208ENST00000563448 CCDC142Q17RM4 750 aa10.79□□□□□ -0.68
SMG1-208ENST00000563448 GOLGA7BQ2TAP0 167 aa10.79□□□□□ -0.68
SMG1-208ENST00000563448 METTL23Q86XA0 190 aa10.79□□□□□ -0.68
SMG1-208ENST00000563448 CMTR2Q8IYT2 770 aaKnown RBP10.79□□□□□ -0.68
SMG1-208ENST00000563448 MCOLN2Q8IZK6 566 aa10.79□□□□□ -0.68
SMG1-208ENST00000563448 B3GALNT2Q8NCR0 500 aa10.79□□□□□ -0.68
SMG1-208ENST00000563448 HERVK_113Q902F9 699 aa10.79□□□□□ -0.68
SMG1-208ENST00000563448 TNIP3Q96KP6 325 aa10.79□□□□□ -0.68
SMG1-208ENST00000563448 GPR62Q9BZJ7 368 aa10.79□□□□□ -0.68
SMG1-208ENST00000563448 CRTAC1Q9NQ79 661 aa10.79□□□□□ -0.68
SMG1-208ENST00000563448 CYTH4Q9UIA0 394 aa10.79□□□□□ -0.68
SMG1-208ENST00000563448 DSEQ9UL01 958 aa10.79□□□□□ -0.68
SMG1-208ENST00000563448 PAXBP1Q9Y5B6 917 aa10.79□□□□□ -0.68
SMG1-208ENST00000563448 MYO16Q9Y6X6 1858 aa10.79□□□□□ -0.68
SMG1-208ENST00000563448 ARHGEF37A1IGU5 675 aa10.78□□□□□ -0.68
SMG1-208ENST00000563448 BTNL10A8MVZ5 291 aa10.78□□□□□ -0.68
SMG1-208ENST00000563448 M0QYV0 167 aa10.78□□□□□ -0.68
SMG1-208ENST00000563448 TRAPPC3O43617 180 aa10.78□□□□□ -0.68
SMG1-208ENST00000563448 LSM8O95777 96 aaKnown RBP10.78□□□□□ -0.68
SMG1-208ENST00000563448 CCDC130P13994 396 aa10.78□□□□□ -0.68
SMG1-208ENST00000563448 GPD2P43304 727 aa10.78□□□□□ -0.68
SMG1-208ENST00000563448 NSFP46459 744 aaKnown RBP10.78□□□□□ -0.68
SMG1-208ENST00000563448 PTP4A2Q12974 167 aa10.78□□□□□ -0.68
SMG1-208ENST00000563448 BTG3Q14201 252 aaPredicted RBP10.78□□□□□ -0.68
SMG1-208ENST00000563448 STILQ15468 1287 aa10.78□□□□□ -0.68
SMG1-208ENST00000563448 PKDCCQ504Y2 493 aa10.78□□□□□ -0.68
SMG1-208ENST00000563448 OVOS1Q6IE37 1185 aa10.78□□□□□ -0.68
SMG1-208ENST00000563448 FUT10Q6P4F1 479 aa10.78□□□□□ -0.68
SMG1-208ENST00000563448 MON1BQ7L1V2 547 aa10.78□□□□□ -0.68
SMG1-208ENST00000563448 TTC30AQ86WT1 665 aa10.78□□□□□ -0.68
SMG1-208ENST00000563448 PHF13Q86YI8 300 aaPredicted RBP10.78□□□□□ -0.68
SMG1-208ENST00000563448 TMEM35BQ8NCS4 154 aa10.78□□□□□ -0.68
SMG1-208ENST00000563448 UBA3Q8TBC4 463 aa10.78□□□□□ -0.68
SMG1-208ENST00000563448 SYT15Q9BQS2 421 aa10.78□□□□□ -0.68
SMG1-208ENST00000563448 ZNF518BQ9C0D4 1074 aa10.78□□□□□ -0.68
SMG1-208ENST00000563448 CDH9Q9ULB4 789 aa10.78□□□□□ -0.68
SMG1-208ENST00000563448 MRPL42Q9Y6G3 142 aaKnown RBP10.78□□□□□ -0.68
SMG1-208ENST00000563448 NCANO14594 1321 aa10.78□□□□□ -0.68
SMG1-208ENST00000563448 MACROD2A1Z1Q3 448 aa10.77□□□□□ -0.68
SMG1-208ENST00000563448 MYBPHLA2RUH7 354 aa10.77□□□□□ -0.68
SMG1-208ENST00000563448 SYN3O14994 580 aa10.77□□□□□ -0.68
SMG1-208ENST00000563448 GJB5O95377 273 aa10.77□□□□□ -0.68
SMG1-208ENST00000563448 MOCS3O95396 460 aa10.77□□□□□ -0.68
SMG1-208ENST00000563448 EFEMP2O95967 443 aa10.77□□□□□ -0.68
SMG1-208ENST00000563448 ADORA2BP29275 332 aa10.77□□□□□ -0.68
SMG1-208ENST00000563448 GPC5P78333 572 aa10.77□□□□□ -0.68
SMG1-208ENST00000563448 HTRA4P83105 476 aaPredicted RBP10.77□□□□□ -0.68
SMG1-208ENST00000563448 C2CD6Q53TS8 623 aa10.77□□□□□ -0.68
SMG1-208ENST00000563448 MDH1BQ5I0G3 518 aa10.77□□□□□ -0.68
SMG1-208ENST00000563448 OR10T2Q8NGX3 314 aa10.77□□□□□ -0.68
SMG1-208ENST00000563448 CTNNBL1Q8WYA6 563 aaPredicted RBP10.77□□□□□ -0.68
SMG1-208ENST00000563448 SECISBP2LQ93073 1101 aaKnown RBP10.77□□□□□ -0.68
SMG1-208ENST00000563448 TMEM209Q96SK2 561 aa10.77□□□□□ -0.68
SMG1-208ENST00000563448 YME1L1Q96TA2 773 aa10.77□□□□□ -0.68
SMG1-208ENST00000563448 ACBD6Q9BR61 282 aa10.77□□□□□ -0.68
SMG1-208ENST00000563448 C11orf70Q9BRQ4 267 aa10.77□□□□□ -0.68
SMG1-208ENST00000563448 DNAI2Q9GZS0 605 aa10.77□□□□□ -0.68
SMG1-208ENST00000563448 A0A0A6YYK5 440 aaPredicted RBP10.77□□□□□ -0.69
SMG1-208ENST00000563448 ATMINO43313 823 aaPredicted RBP10.77□□□□□ -0.69
SMG1-208ENST00000563448 BUB1O43683 1085 aa10.77□□□□□ -0.69
SMG1-208ENST00000563448 TNNT1P13805 278 aa10.77□□□□□ -0.69
SMG1-208ENST00000563448 FGFR3P22607 806 aa10.77□□□□□ -0.69
SMG1-208ENST00000563448 ALDH7A1P49419 539 aaKnown RBP10.77□□□□□ -0.69
SMG1-208ENST00000563448 YWHAHQ04917 246 aaPredicted RBP10.77□□□□□ -0.69
SMG1-208ENST00000563448 MRPL58Q14197 206 aaKnown RBP10.77□□□□□ -0.69
SMG1-208ENST00000563448 INTS6LQ5JSJ4 861 aaKnown RBP10.77□□□□□ -0.69
SMG1-208ENST00000563448 SPOUT1Q5T280 376 aaKnown RBP10.77□□□□□ -0.69
SMG1-208ENST00000563448 FAM171A1Q5VUB5 890 aa10.77□□□□□ -0.69
SMG1-208ENST00000563448 LLGL2Q6P1M3 1020 aa10.77□□□□□ -0.69
SMG1-208ENST00000563448 KCNT2Q6UVM3 1135 aa10.77□□□□□ -0.69
SMG1-208ENST00000563448 MMS22LQ6ZRQ5 1243 aa10.77□□□□□ -0.69
SMG1-208ENST00000563448 PAQR9Q6ZVX9 377 aa10.77□□□□□ -0.69
SMG1-208ENST00000563448 TAS1R1Q7RTX1 841 aa10.77□□□□□ -0.69
SMG1-208ENST00000563448 TNS4Q8IZW8 715 aa10.77□□□□□ -0.69
SMG1-208ENST00000563448 FUKQ8N0W3 1084 aa10.77□□□□□ -0.69
SMG1-208ENST00000563448 THEM5Q8N1Q8 247 aa10.77□□□□□ -0.69
SMG1-208ENST00000563448 RNF10Q8N5U6 811 aaKnown RBP10.77□□□□□ -0.69
SMG1-208ENST00000563448 SLC35G2Q8TBE7 412 aa10.77□□□□□ -0.69
SMG1-208ENST00000563448 SLC2A14Q8TDB8 520 aa10.77□□□□□ -0.69
SMG1-208ENST00000563448 ZNF653Q96CK0 615 aa10.77□□□□□ -0.69
SMG1-208ENST00000563448 IGSF21Q96ID5 467 aa10.77□□□□□ -0.69
SMG1-208ENST00000563448 B3GALT6Q96L58 329 aa10.77□□□□□ -0.69
SMG1-208ENST00000563448 PKMYT1Q99640 499 aa10.77□□□□□ -0.69
SMG1-208ENST00000563448 HNRNPABQ99729 332 aaKnown RBP10.77□□□□□ -0.69
SMG1-208ENST00000563448 LBHD1Q9BQE6 289 aaPredicted RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms