RNA–Protein interactions for RNA: ENST00000563348.1

TRADD-203, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 833 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-203ENST00000563348 SMARCD2Q92925 531 aa20.37■□□□□ 0.85
TRADD-203ENST00000563348 SYAP1Q96A49 352 aaPredicted RBP20.37■□□□□ 0.85
TRADD-203ENST00000563348 GSDMAQ96QA5 445 aa20.37■□□□□ 0.85
TRADD-203ENST00000563348 PRRX2Q99811 253 aa20.37■□□□□ 0.85
TRADD-203ENST00000563348 PI4K2AQ9BTU6 479 aa20.37■□□□□ 0.85
TRADD-203ENST00000563348 VRTNQ9H8Y1 702 aa20.37■□□□□ 0.85
TRADD-203ENST00000563348 TRPV4Q9HBA0 871 aa20.37■□□□□ 0.85
TRADD-203ENST00000563348 CDH9Q9ULB4 789 aa20.37■□□□□ 0.85
TRADD-203ENST00000563348 CA14Q9ULX7 337 aa20.37■□□□□ 0.85
TRADD-203ENST00000563348 IKBKBO14920 756 aa20.36■□□□□ 0.85
TRADD-203ENST00000563348 SMC2O95347 1197 aa20.36■□□□□ 0.85
TRADD-203ENST00000563348 PDGFRBP09619 1106 aa20.36■□□□□ 0.85
TRADD-203ENST00000563348 NR2F2P24468 414 aa20.36■□□□□ 0.85
TRADD-203ENST00000563348 RPL13P26373 211 aaKnown RBP20.36■□□□□ 0.85
TRADD-203ENST00000563348 GABRR2P28476 465 aa20.36■□□□□ 0.85
TRADD-203ENST00000563348 GNL1P36915 607 aaPredicted RBP20.36■□□□□ 0.85
TRADD-203ENST00000563348 DLG4P78352 724 aa20.36■□□□□ 0.85
TRADD-203ENST00000563348 ADAM9Q13443 819 aa20.36■□□□□ 0.85
TRADD-203ENST00000563348 BIRC3Q13489 604 aa20.36■□□□□ 0.85
TRADD-203ENST00000563348 TAF12Q16514 161 aa20.36■□□□□ 0.85
TRADD-203ENST00000563348 ZCWPW2Q504Y3 356 aa20.36■□□□□ 0.85
TRADD-203ENST00000563348 CWF19L1Q69YN2 538 aaKnown RBP20.36■□□□□ 0.85
TRADD-203ENST00000563348 ELOA2Q8IYF1 753 aaPredicted RBP20.36■□□□□ 0.85
TRADD-203ENST00000563348 TMEM105Q8N8V8 129 aa20.36■□□□□ 0.85
TRADD-203ENST00000563348 ZSCAN18Q8TBC5 510 aaPredicted RBP20.36■□□□□ 0.85
TRADD-203ENST00000563348 FUBP3Q96I24 572 aaKnown RBP eCLIP20.36■□□□□ 0.85
TRADD-203ENST00000563348 SYT15Q9BQS2 421 aa20.36■□□□□ 0.85
TRADD-203ENST00000563348 MRPL45Q9BRJ2 306 aaKnown RBP20.36■□□□□ 0.85
TRADD-203ENST00000563348 ATXN3LQ9H3M9 355 aa20.36■□□□□ 0.85
TRADD-203ENST00000563348 PCDHA5Q9Y5H7 936 aa20.36■□□□□ 0.85
TRADD-203ENST00000563348 ATP2C2O75185 946 aa20.35■□□□□ 0.85
TRADD-203ENST00000563348 AKAP3O75969 853 aa20.35■□□□□ 0.85
TRADD-203ENST00000563348 CYP2F1P24903 491 aa20.35■□□□□ 0.85
TRADD-203ENST00000563348 RPL10AP62906 217 aaKnown RBP20.35■□□□□ 0.85
TRADD-203ENST00000563348 TNNC1P63316 161 aa20.35■□□□□ 0.85
TRADD-203ENST00000563348 PFKPQ01813 784 aa20.35■□□□□ 0.85
TRADD-203ENST00000563348 NCOA4Q13772 614 aa20.35■□□□□ 0.85
TRADD-203ENST00000563348 ZACNQ401N2 412 aa20.35■□□□□ 0.85
TRADD-203ENST00000563348 CFAP221Q4G0U5 840 aa20.35■□□□□ 0.85
TRADD-203ENST00000563348 SPATA2LQ8IUW3 424 aaPredicted RBP20.35■□□□□ 0.85
TRADD-203ENST00000563348 SMYD4Q8IYR2 804 aaPredicted RBP20.35■□□□□ 0.85
TRADD-203ENST00000563348 FAM122AQ96E09 287 aa20.35■□□□□ 0.85
TRADD-203ENST00000563348 SNX25Q9H3E2 840 aa20.35■□□□□ 0.85
TRADD-203ENST00000563348 IL21Q9HBE4 155 aa20.35■□□□□ 0.85
TRADD-203ENST00000563348 ARHGEF3Q9NR81 526 aa20.35■□□□□ 0.85
TRADD-203ENST00000563348 HOOK1Q9UJC3 728 aaKnown RBP20.35■□□□□ 0.85
TRADD-203ENST00000563348 F5P12259 2224 aa20.35■□□□□ 0.85
TRADD-203ENST00000563348 VNN1O95497 513 aa20.34■□□□□ 0.85
TRADD-203ENST00000563348 HMGA1P17096 107 aaKnown RBP20.34■□□□□ 0.85
TRADD-203ENST00000563348 AOC1P19801 751 aa20.34■□□□□ 0.85
TRADD-203ENST00000563348 PSMC2P35998 433 aaKnown RBP20.34■□□□□ 0.85
TRADD-203ENST00000563348 PLA2G5P39877 138 aa20.34■□□□□ 0.85
TRADD-203ENST00000563348 GPR15P49685 360 aa20.34■□□□□ 0.85
TRADD-203ENST00000563348 VAMP7P51809 220 aa20.34■□□□□ 0.85
TRADD-203ENST00000563348 ENPEPQ07075 957 aa20.34■□□□□ 0.85
TRADD-203ENST00000563348 MAPRE1Q15691 268 aaKnown RBP20.34■□□□□ 0.85
TRADD-203ENST00000563348 DDR2Q16832 855 aa20.34■□□□□ 0.85
TRADD-203ENST00000563348 CCDC142Q17RM4 750 aa20.34■□□□□ 0.85
TRADD-203ENST00000563348 EDRF1Q3B7T1 1238 aa20.34■□□□□ 0.85
TRADD-203ENST00000563348 SLC44A4Q53GD3 710 aa20.34■□□□□ 0.85
TRADD-203ENST00000563348 COBLL1Q53SF7 1204 aa20.34■□□□□ 0.85
TRADD-203ENST00000563348 C1orf220Q5T0J3 134 aa20.34■□□□□ 0.85
TRADD-203ENST00000563348 ZNF658Q5TYW1 1059 aaPredicted RBP20.34■□□□□ 0.85
TRADD-203ENST00000563348 PHLDB3Q6NSJ2 640 aa20.34■□□□□ 0.85
TRADD-203ENST00000563348 C4orf50Q6ZRC1 276 aa20.34■□□□□ 0.85
TRADD-203ENST00000563348 INTS8Q75QN2 995 aaKnown RBP20.34■□□□□ 0.85
TRADD-203ENST00000563348 SV2AQ7L0J3 742 aa20.34■□□□□ 0.85
TRADD-203ENST00000563348 PRSS33Q8NF86 280 aa20.34■□□□□ 0.85
TRADD-203ENST00000563348 OR6B3Q8NGW1 331 aa20.34■□□□□ 0.85
TRADD-203ENST00000563348 SMARCE1Q969G3 411 aa20.34■□□□□ 0.85
TRADD-203ENST00000563348 SLITRK6Q9H5Y7 841 aa20.34■□□□□ 0.85
TRADD-203ENST00000563348 CRTAC1Q9NQ79 661 aa20.34■□□□□ 0.85
TRADD-203ENST00000563348 NXF1Q9UBU9 619 aaKnown RBP20.34■□□□□ 0.85
TRADD-203ENST00000563348 STK25O00506 426 aa20.33■□□□□ 0.85
TRADD-203ENST00000563348 PI15O43692 258 aa20.33■□□□□ 0.85
TRADD-203ENST00000563348 CSH1P0DML2 217 aa20.33■□□□□ 0.85
TRADD-203ENST00000563348 CSH2P0DML3 217 aa20.33■□□□□ 0.85
TRADD-203ENST00000563348 CDC25CP30307 473 aa20.33■□□□□ 0.85
TRADD-203ENST00000563348 VIPR2P41587 438 aa20.33■□□□□ 0.85
TRADD-203ENST00000563348 PRCPP42785 496 aa20.33■□□□□ 0.85
TRADD-203ENST00000563348 MAGEA11P43364 429 aa20.33■□□□□ 0.85
TRADD-203ENST00000563348 MCCD1P59942 119 aaPredicted RBP20.33■□□□□ 0.85
TRADD-203ENST00000563348 PSMC1P62191 440 aaKnown RBP20.33■□□□□ 0.85
TRADD-203ENST00000563348 SGSM1Q2NKQ1 1148 aa20.33■□□□□ 0.85
TRADD-203ENST00000563348 ZNF699Q32M78 642 aa20.33■□□□□ 0.85
TRADD-203ENST00000563348 ARHGAP15Q53QZ3 475 aa20.33■□□□□ 0.85
TRADD-203ENST00000563348 STXBP5Q5T5C0 1151 aa20.33■□□□□ 0.85
TRADD-203ENST00000563348 FAM186BQ8IYM0 893 aa20.33■□□□□ 0.85
TRADD-203ENST00000563348 ERCC4Q92889 916 aaPredicted RBP20.33■□□□□ 0.85
TRADD-203ENST00000563348 E2F7Q96AV8 911 aa20.33■□□□□ 0.85
TRADD-203ENST00000563348 SHDQ96IW2 340 aa20.33■□□□□ 0.85
TRADD-203ENST00000563348 MKNK1Q9BUB5 465 aa20.33■□□□□ 0.85
TRADD-203ENST00000563348 TRMT61BQ9BVS5 477 aaKnown RBP20.33■□□□□ 0.85
TRADD-203ENST00000563348 GTPBP4Q9BZE4 634 aaKnown RBP20.33■□□□□ 0.85
TRADD-203ENST00000563348 TBC1D17Q9HA65 648 aa20.33■□□□□ 0.85
TRADD-203ENST00000563348 MAGEC2Q9UBF1 373 aaPredicted RBP20.33■□□□□ 0.85
TRADD-203ENST00000563348 NME7Q9Y5B8 376 aa20.33■□□□□ 0.85
TRADD-203ENST00000563348 WDFY4Q6ZS81 3184 aa20.32■□□□□ 0.84
TRADD-203ENST00000563348 GADD45BO75293 160 aaPredicted RBP20.32■□□□□ 0.84
TRADD-203ENST00000563348 F11P03951 625 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms