RNA–Protein interactions for RNA: ENST00000563112.1

CLK3-210, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-210ENST00000563112 FAM170BA6NMN3 283 aa18.06■□□□□ 0.48
CLK3-210ENST00000563112 HEPACAM2A8MVW5 462 aa18.06■□□□□ 0.48
CLK3-210ENST00000563112 MAN2B1O00754 1011 aa18.06■□□□□ 0.48
CLK3-210ENST00000563112 GABRDO14764 452 aa18.06■□□□□ 0.48
CLK3-210ENST00000563112 NCAM2O15394 837 aa18.06■□□□□ 0.48
CLK3-210ENST00000563112 KIF20AO95235 890 aa18.06■□□□□ 0.48
CLK3-210ENST00000563112 STK4Q13043 487 aa18.06■□□□□ 0.48
CLK3-210ENST00000563112 TRPC3Q13507 836 aa18.06■□□□□ 0.48
CLK3-210ENST00000563112 SCARA3Q6AZY7 606 aa18.06■□□□□ 0.48
CLK3-210ENST00000563112 ZNF852Q6ZMS4 543 aa18.06■□□□□ 0.48
CLK3-210ENST00000563112 OSTM1Q86WC4 334 aa18.06■□□□□ 0.48
CLK3-210ENST00000563112 SPATA2LQ8IUW3 424 aaPredicted RBP18.06■□□□□ 0.48
CLK3-210ENST00000563112 ARID3BQ8IVW6 561 aaPredicted RBP18.06■□□□□ 0.48
CLK3-210ENST00000563112 CHAMP1Q96JM3 812 aa18.06■□□□□ 0.48
CLK3-210ENST00000563112 TASP1Q9H6P5 420 aa18.06■□□□□ 0.48
CLK3-210ENST00000563112 ABCB6Q9NP58 842 aa18.06■□□□□ 0.48
CLK3-210ENST00000563112 LTB4R2Q9NPC1 389 aa18.06■□□□□ 0.48
CLK3-210ENST00000563112 TRPV5Q9NQA5 729 aa18.06■□□□□ 0.48
CLK3-210ENST00000563112 HEBP1Q9NRV9 189 aa18.06■□□□□ 0.48
CLK3-210ENST00000563112 TMLHEQ9NVH6 421 aa18.06■□□□□ 0.48
CLK3-210ENST00000563112 GTF3C4Q9UKN8 822 aa18.06■□□□□ 0.48
CLK3-210ENST00000563112 FAM237AA0A1B0GTK4 181 aa18.05■□□□□ 0.48
CLK3-210ENST00000563112 A0A1W2PQ27 194 aa18.05■□□□□ 0.48
CLK3-210ENST00000563112 A0A1W2PQ64 194 aa18.05■□□□□ 0.48
CLK3-210ENST00000563112 A0A1W2PQD8 194 aa18.05■□□□□ 0.48
CLK3-210ENST00000563112 PHACTR2O75167 634 aa18.05■□□□□ 0.48
CLK3-210ENST00000563112 CSH1P0DML2 217 aa18.05■□□□□ 0.48
CLK3-210ENST00000563112 CSH2P0DML3 217 aa18.05■□□□□ 0.48
CLK3-210ENST00000563112 NBL1P41271 181 aa18.05■□□□□ 0.48
CLK3-210ENST00000563112 MAGEA9P43362 315 aa18.05■□□□□ 0.48
CLK3-210ENST00000563112 NDUFA8P51970 172 aa18.05■□□□□ 0.48
CLK3-210ENST00000563112 MAPRE1Q15691 268 aaKnown RBP18.05■□□□□ 0.48
CLK3-210ENST00000563112 STXBP5Q5T5C0 1151 aa18.05■□□□□ 0.48
CLK3-210ENST00000563112 C4orf50Q6ZRC1 276 aa18.05■□□□□ 0.48
CLK3-210ENST00000563112 FSIP1Q8NA03 581 aa18.05■□□□□ 0.48
CLK3-210ENST00000563112 CCDC34Q96HJ3 373 aa18.05■□□□□ 0.48
CLK3-210ENST00000563112 FUBP3Q96I24 572 aaKnown RBP eCLIP18.05■□□□□ 0.48
CLK3-210ENST00000563112 DLGAP2Q9P1A6 1054 aa18.05■□□□□ 0.48
CLK3-210ENST00000563112 CDH9Q9ULB4 789 aa18.05■□□□□ 0.48
CLK3-210ENST00000563112 MIA3Q5JRA6 1907 aa18.05■□□□□ 0.48
CLK3-210ENST00000563112 PROB1E7EW31 1015 aa18.04■□□□□ 0.48
CLK3-210ENST00000563112 PDXKO00764 312 aa18.04■□□□□ 0.48
CLK3-210ENST00000563112 CST3P01034 146 aaPredicted RBP18.04■□□□□ 0.48
CLK3-210ENST00000563112 RPN1P04843 607 aaKnown RBP18.04■□□□□ 0.48
CLK3-210ENST00000563112 FAM163BP0C2L3 166 aa18.04■□□□□ 0.48
CLK3-210ENST00000563112 CD72P21854 359 aa18.04■□□□□ 0.48
CLK3-210ENST00000563112 WARSP23381 471 aaKnown RBP18.04■□□□□ 0.48
CLK3-210ENST00000563112 CYP2F1P24903 491 aa18.04■□□□□ 0.48
CLK3-210ENST00000563112 WEE1P30291 646 aa18.04■□□□□ 0.48
CLK3-210ENST00000563112 AP3M2P53677 418 aa18.04■□□□□ 0.48
CLK3-210ENST00000563112 TNNC1P63316 161 aa18.04■□□□□ 0.48
CLK3-210ENST00000563112 CYP4F8P98187 520 aa18.04■□□□□ 0.48
CLK3-210ENST00000563112 LIMS2Q7Z4I7 341 aa18.04■□□□□ 0.48
CLK3-210ENST00000563112 C1orf210Q8IVY1 113 aa18.04■□□□□ 0.48
CLK3-210ENST00000563112 KIAA0895Q8NCT3 520 aa18.04■□□□□ 0.48
CLK3-210ENST00000563112 CSGALNACT1Q8TDX6 532 aa18.04■□□□□ 0.48
CLK3-210ENST00000563112 SYT15Q9BQS2 421 aa18.04■□□□□ 0.48
CLK3-210ENST00000563112 SNX25Q9H3E2 840 aa18.04■□□□□ 0.48
CLK3-210ENST00000563112 IL21Q9HBE4 155 aa18.04■□□□□ 0.48
CLK3-210ENST00000563112 OBP2AQ9NY56 170 aa18.04■□□□□ 0.48
CLK3-210ENST00000563112 UXTQ9UBK9 157 aaPredicted RBP18.04■□□□□ 0.48
CLK3-210ENST00000563112 F5P12259 2224 aa18.03■□□□□ 0.48
CLK3-210ENST00000563112 CHADO15335 359 aa18.03■□□□□ 0.48
CLK3-210ENST00000563112 GFRA3O60609 400 aa18.03■□□□□ 0.48
CLK3-210ENST00000563112 LRRN2O75325 713 aa18.03■□□□□ 0.48
CLK3-210ENST00000563112 CLSTN1O94985 981 aa18.03■□□□□ 0.48
CLK3-210ENST00000563112 ATICP31939 592 aa18.03■□□□□ 0.48
CLK3-210ENST00000563112 BIRC3Q13489 604 aa18.03■□□□□ 0.48
CLK3-210ENST00000563112 DDR2Q16832 855 aa18.03■□□□□ 0.48
CLK3-210ENST00000563112 WDR72Q3MJ13 1102 aa18.03■□□□□ 0.48
CLK3-210ENST00000563112 CFAP221Q4G0U5 840 aa18.03■□□□□ 0.48
CLK3-210ENST00000563112 FAM171BQ6P995 826 aa18.03■□□□□ 0.48
CLK3-210ENST00000563112 GPIHBP1Q8IV16 184 aa18.03■□□□□ 0.48
CLK3-210ENST00000563112 SLC9A9Q8IVB4 645 aa18.03■□□□□ 0.48
CLK3-210ENST00000563112 SCN4BQ8IWT1 228 aa18.03■□□□□ 0.48
CLK3-210ENST00000563112 KBTBD7Q8WVZ9 684 aa18.03■□□□□ 0.48
CLK3-210ENST00000563112 MRPS31Q92665 395 aaKnown RBP18.03■□□□□ 0.48
CLK3-210ENST00000563112 SYAP1Q96A49 352 aaPredicted RBP18.03■□□□□ 0.48
CLK3-210ENST00000563112 PKMYT1Q99640 499 aa18.03■□□□□ 0.48
CLK3-210ENST00000563112 MKNK1Q9BUB5 465 aa18.03■□□□□ 0.48
CLK3-210ENST00000563112 MAGEC2Q9UBF1 373 aaPredicted RBP18.03■□□□□ 0.48
CLK3-210ENST00000563112 MAGED2Q9UNF1 606 aaPredicted RBP18.03■□□□□ 0.48
CLK3-210ENST00000563112 MTF2Q9Y483 593 aaPredicted RBP18.03■□□□□ 0.48
CLK3-210ENST00000563112 MYBPHLA2RUH7 354 aa18.02■□□□□ 0.48
CLK3-210ENST00000563112 SOBPA7XYQ1 873 aa18.02■□□□□ 0.48
CLK3-210ENST00000563112 CALUO43852 315 aaPredicted RBP18.02■□□□□ 0.48
CLK3-210ENST00000563112 TACC1O75410 805 aa18.02■□□□□ 0.48
CLK3-210ENST00000563112 F11P03951 625 aa18.02■□□□□ 0.48
CLK3-210ENST00000563112 PDGFRBP09619 1106 aa18.02■□□□□ 0.48
CLK3-210ENST00000563112 GLULP15104 373 aa18.02■□□□□ 0.48
CLK3-210ENST00000563112 HMGA1P17096 107 aaKnown RBP18.02■□□□□ 0.48
CLK3-210ENST00000563112 DDX6P26196 483 aaKnown RBP eCLIP18.02■□□□□ 0.48
CLK3-210ENST00000563112 GNL1P36915 607 aaPredicted RBP18.02■□□□□ 0.48
CLK3-210ENST00000563112 AVPR1AP37288 418 aa18.02■□□□□ 0.48
CLK3-210ENST00000563112 MAGEA11P43364 429 aa18.02■□□□□ 0.48
CLK3-210ENST00000563112 GPR15P49685 360 aa18.02■□□□□ 0.48
CLK3-210ENST00000563112 NLRP12P59046 1061 aa18.02■□□□□ 0.48
CLK3-210ENST00000563112 FCHO2Q0JRZ9 810 aa18.02■□□□□ 0.48
CLK3-210ENST00000563112 ARHGAP29Q52LW3 1261 aa18.02■□□□□ 0.48
CLK3-210ENST00000563112 KRBA2Q6ZNG9 492 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms