RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 PROZP22891 400 aa3.66□□□□□ -1.82
CHD9-207ENST00000562806 ADRA1BP35368 520 aa3.66□□□□□ -1.82
CHD9-207ENST00000562806 RARRES1P49788 294 aa3.66□□□□□ -1.82
CHD9-207ENST00000562806 ELLP55199 621 aaPredicted RBP3.66□□□□□ -1.82
CHD9-207ENST00000562806 E2F2Q14209 437 aa3.66□□□□□ -1.82
CHD9-207ENST00000562806 ZNF169Q14929 603 aaPredicted RBP3.66□□□□□ -1.82
CHD9-207ENST00000562806 POLD3Q15054 466 aaPredicted RBP3.66□□□□□ -1.82
CHD9-207ENST00000562806 CNN3Q15417 329 aaKnown RBP3.66□□□□□ -1.82
CHD9-207ENST00000562806 MGAT5BQ3V5L5 792 aa3.66□□□□□ -1.82
CHD9-207ENST00000562806 PRR16Q569H4 304 aa3.66□□□□□ -1.82
CHD9-207ENST00000562806 RNF220Q5VTB9 566 aa3.66□□□□□ -1.82
CHD9-207ENST00000562806 KAZNQ674X7 775 aa3.66□□□□□ -1.82
CHD9-207ENST00000562806 PCSK4Q6UW60 755 aa3.66□□□□□ -1.82
CHD9-207ENST00000562806 WDR75Q8IWA0 830 aaKnown RBP3.66□□□□□ -1.82
CHD9-207ENST00000562806 FAM109AQ8N4B1 249 aa3.66□□□□□ -1.82
CHD9-207ENST00000562806 NSUN7Q8NE18 718 aaKnown RBP3.66□□□□□ -1.82
CHD9-207ENST00000562806 TOR1AIP2Q8NFQ8 470 aa3.66□□□□□ -1.82
CHD9-207ENST00000562806 LRTOMTQ8WZ04 291 aa3.66□□□□□ -1.82
CHD9-207ENST00000562806 ANKS1AQ92625 1134 aa3.66□□□□□ -1.82
CHD9-207ENST00000562806 FAM136AQ96C01 138 aa3.66□□□□□ -1.82
CHD9-207ENST00000562806 LRIG1Q96JA1 1093 aa3.66□□□□□ -1.82
CHD9-207ENST00000562806 PDLIM2Q96JY6 352 aa3.66□□□□□ -1.82
CHD9-207ENST00000562806 DUSP26Q9BV47 211 aa3.66□□□□□ -1.82
CHD9-207ENST00000562806 TPSD1Q9BZJ3 242 aa3.66□□□□□ -1.82
CHD9-207ENST00000562806 AMBRA1Q9C0C7 1298 aa3.66□□□□□ -1.82
CHD9-207ENST00000562806 ZNF518BQ9C0D4 1074 aa3.66□□□□□ -1.82
CHD9-207ENST00000562806 ZMAT3Q9HA38 289 aaKnown RBP3.66□□□□□ -1.82
CHD9-207ENST00000562806 A1CFQ9NQ94 594 aaKnown RBP3.66□□□□□ -1.82
CHD9-207ENST00000562806 OBP2AQ9NY56 170 aa3.66□□□□□ -1.82
CHD9-207ENST00000562806 EHD3Q9NZN3 535 aa3.66□□□□□ -1.82
CHD9-207ENST00000562806 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.66□□□□□ -1.82
CHD9-207ENST00000562806 AGAP1Q9UPQ3 857 aa3.66□□□□□ -1.82
CHD9-207ENST00000562806 SH2B3Q9UQQ2 575 aa3.66□□□□□ -1.82
CHD9-207ENST00000562806 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.66□□□□□ -1.82
CHD9-207ENST00000562806 FRMPD2Q68DX3 1309 aaPredicted RBP3.66□□□□□ -1.82
CHD9-207ENST00000562806 A0A087WWL8 130 aa3.65□□□□□ -1.83
CHD9-207ENST00000562806 ZAR1LA6NP61 321 aa3.65□□□□□ -1.83
CHD9-207ENST00000562806 BTN3A1O00481 513 aa3.65□□□□□ -1.83
CHD9-207ENST00000562806 VPS4BO75351 444 aa3.65□□□□□ -1.83
CHD9-207ENST00000562806 INMTO95050 263 aa3.65□□□□□ -1.83
CHD9-207ENST00000562806 NPR1P16066 1061 aa3.65□□□□□ -1.83
CHD9-207ENST00000562806 PPP3CBP16298 524 aa3.65□□□□□ -1.83
CHD9-207ENST00000562806 TYRP1P17643 537 aa3.65□□□□□ -1.83
CHD9-207ENST00000562806 SLC7A1P30825 629 aa3.65□□□□□ -1.83
CHD9-207ENST00000562806 GRIA3P42263 894 aa3.65□□□□□ -1.83
CHD9-207ENST00000562806 SLC11A2P49281 568 aa3.65□□□□□ -1.83
CHD9-207ENST00000562806 CACNA2D1P54289 1103 aa3.65□□□□□ -1.83
CHD9-207ENST00000562806 MC2RQ01718 297 aa3.65□□□□□ -1.83
CHD9-207ENST00000562806 FOXI1Q12951 378 aa3.65□□□□□ -1.83
CHD9-207ENST00000562806 SLC13A2Q13183 592 aa3.65□□□□□ -1.83
CHD9-207ENST00000562806 BMPR2Q13873 1038 aa3.65□□□□□ -1.83
CHD9-207ENST00000562806 INSCQ1MX18 579 aa3.65□□□□□ -1.83
CHD9-207ENST00000562806 HSP90AB2PQ58FF8 381 aa3.65□□□□□ -1.83
CHD9-207ENST00000562806 RBM20Q5T481 1227 aaKnown RBP3.65□□□□□ -1.83
CHD9-207ENST00000562806 ZNF618Q5T7W0 954 aa3.65□□□□□ -1.83
CHD9-207ENST00000562806 OLFML1Q6UWY5 402 aa3.65□□□□□ -1.83
CHD9-207ENST00000562806 TMEM108Q6UXF1 575 aa3.65□□□□□ -1.83
CHD9-207ENST00000562806 CCDC149Q6ZUS6 474 aa3.65□□□□□ -1.83
CHD9-207ENST00000562806 C11orf96Q7Z7L8 435 aa3.65□□□□□ -1.83
CHD9-207ENST00000562806 DTX2Q86UW9 622 aa3.65□□□□□ -1.83
CHD9-207ENST00000562806 GAS2L3Q86XJ1 694 aa3.65□□□□□ -1.83
CHD9-207ENST00000562806 DGKHQ86XP1 1220 aa3.65□□□□□ -1.83
CHD9-207ENST00000562806 PCSK9Q8NBP7 692 aaKnown RBP3.65□□□□□ -1.83
CHD9-207ENST00000562806 IL31RAQ8NI17 732 aa3.65□□□□□ -1.83
CHD9-207ENST00000562806 SLC30A5Q8TAD4 765 aa3.65□□□□□ -1.83
CHD9-207ENST00000562806 SMCR8Q8TEV9 937 aaPredicted RBP3.65□□□□□ -1.83
CHD9-207ENST00000562806 IPCEF1Q8WWN9 437 aaPredicted RBP3.65□□□□□ -1.83
CHD9-207ENST00000562806 NMD3Q96D46 503 aaKnown RBP3.65□□□□□ -1.83
CHD9-207ENST00000562806 ZG16BQ96DA0 208 aa3.65□□□□□ -1.83
CHD9-207ENST00000562806 PBKQ96KB5 322 aa3.65□□□□□ -1.83
CHD9-207ENST00000562806 SLC46A1Q96NT5 459 aa3.65□□□□□ -1.83
CHD9-207ENST00000562806 KRTAP4-2Q9BYR5 136 aa3.65□□□□□ -1.83
CHD9-207ENST00000562806 BTBD1Q9H0C5 482 aa3.65□□□□□ -1.83
CHD9-207ENST00000562806 ZCWPW1Q9H0M4 648 aa3.65□□□□□ -1.83
CHD9-207ENST00000562806 NUP62CLQ9H1M0 184 aa3.65□□□□□ -1.83
CHD9-207ENST00000562806 RIOX1Q9H6W3 641 aa3.65□□□□□ -1.83
CHD9-207ENST00000562806 KIAA1586Q9HCI6 787 aa3.65□□□□□ -1.83
CHD9-207ENST00000562806 CHPF2Q9P2E5 772 aa3.65□□□□□ -1.83
CHD9-207ENST00000562806 ZNHIT2Q9UHR6 403 aa3.65□□□□□ -1.83
CHD9-207ENST00000562806 TLK1Q9UKI8 766 aa3.65□□□□□ -1.83
CHD9-207ENST00000562806 MBD3L4A6NDZ8 208 aaPredicted RBP3.64□□□□□ -1.83
CHD9-207ENST00000562806 MBD3L3A6NE82 208 aaPredicted RBP3.64□□□□□ -1.83
CHD9-207ENST00000562806 MYO1FO00160 1098 aa3.64□□□□□ -1.83
CHD9-207ENST00000562806 TPP1O14773 563 aa3.64□□□□□ -1.83
CHD9-207ENST00000562806 PRPF3O43395 683 aaKnown RBP3.64□□□□□ -1.83
CHD9-207ENST00000562806 TTLL1O95922 423 aa3.64□□□□□ -1.83
CHD9-207ENST00000562806 KITP10721 976 aa3.64□□□□□ -1.83
CHD9-207ENST00000562806 ALDH9A1P49189 494 aa3.64□□□□□ -1.83
CHD9-207ENST00000562806 CNGA2Q16280 664 aa3.64□□□□□ -1.83
CHD9-207ENST00000562806 KIAA0753Q2KHM9 967 aa3.64□□□□□ -1.83
CHD9-207ENST00000562806 FAM153CQ494X1 144 aa3.64□□□□□ -1.83
CHD9-207ENST00000562806 MTHFD1LQ6UB35 978 aa3.64□□□□□ -1.83
CHD9-207ENST00000562806 SDR16C5Q8N3Y7 309 aa3.64□□□□□ -1.83
CHD9-207ENST00000562806 DNAJC5GQ8N7S2 189 aa3.64□□□□□ -1.83
CHD9-207ENST00000562806 MYCBPAPQ8TBZ2 947 aa3.64□□□□□ -1.83
CHD9-207ENST00000562806 LPIN2Q92539 896 aa3.64□□□□□ -1.83
CHD9-207ENST00000562806 TSR2Q969E8 191 aaKnown RBP3.64□□□□□ -1.83
CHD9-207ENST00000562806 FKBP10Q96AY3 582 aa3.64□□□□□ -1.83
CHD9-207ENST00000562806 APIPQ96GX9 242 aa3.64□□□□□ -1.83
CHD9-207ENST00000562806 PPP1R9BQ96SB3 815 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms