RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 COLGALT2Q8IYK4 626 aa15.14■□□□□ 0.01
COMMD4-205ENST00000562310 C3orf58Q8NDZ4 430 aa15.14■□□□□ 0.01
COMMD4-205ENST00000562310 IPO4Q8TEX9 1081 aaKnown RBP15.14■□□□□ 0.01
COMMD4-205ENST00000562310 MCOLN1Q9GZU1 580 aa15.14■□□□□ 0.01
COMMD4-205ENST00000562310 OSGEPQ9NPF4 335 aa15.14■□□□□ 0.01
COMMD4-205ENST00000562310 WDR35Q9P2L0 1181 aa15.14■□□□□ 0.01
COMMD4-205ENST00000562310 CDC23Q9UJX2 597 aa15.14■□□□□ 0.01
COMMD4-205ENST00000562310 TSPAN16Q9UKR8 245 aa15.14■□□□□ 0.01
COMMD4-205ENST00000562310 HYOU1Q9Y4L1 999 aa15.14■□□□□ 0.01
COMMD4-205ENST00000562310 ABHD14A-ACY1A0A1B0GW23 586 aa15.13■□□□□ 0.01
COMMD4-205ENST00000562310 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.13■□□□□ 0.01
COMMD4-205ENST00000562310 CCDC85CA6NKD9 419 aa15.13■□□□□ 0.01
COMMD4-205ENST00000562310 KIF4AO95239 1232 aa15.13■□□□□ 0.01
COMMD4-205ENST00000562310 TYMPP19971 482 aa15.13■□□□□ 0.01
COMMD4-205ENST00000562310 PTP4A2Q12974 167 aa15.13■□□□□ 0.01
COMMD4-205ENST00000562310 WHAMMP3Q1A5X7 153 aa15.13■□□□□ 0.01
COMMD4-205ENST00000562310 MEI1Q5TIA1 1274 aa15.13■□□□□ 0.01
COMMD4-205ENST00000562310 WSCD1Q658N2 575 aa15.13■□□□□ 0.01
COMMD4-205ENST00000562310 PLEKHA7Q6IQ23 1121 aa15.13■□□□□ 0.01
COMMD4-205ENST00000562310 PEX26Q7Z412 305 aa15.13■□□□□ 0.01
COMMD4-205ENST00000562310 OSTM1Q86WC4 334 aa15.13■□□□□ 0.01
COMMD4-205ENST00000562310 CRIPAKQ8N1N5 446 aa15.13■□□□□ 0.01
COMMD4-205ENST00000562310 LRRC43Q8N309 656 aa15.13■□□□□ 0.01
COMMD4-205ENST00000562310 TMEM199Q8N511 208 aa15.13■□□□□ 0.01
COMMD4-205ENST00000562310 B3GALNT2Q8NCR0 500 aa15.13■□□□□ 0.01
COMMD4-205ENST00000562310 SUSD3Q96L08 255 aa15.13■□□□□ 0.01
COMMD4-205ENST00000562310 TMEM175Q9BSA9 504 aa15.13■□□□□ 0.01
COMMD4-205ENST00000562310 PARVAQ9NVD7 372 aa15.13■□□□□ 0.01
COMMD4-205ENST00000562310 SNX12Q9UMY4 172 aa15.13■□□□□ 0.01
COMMD4-205ENST00000562310 PCDHB8Q9UN66 801 aa15.13■□□□□ 0.01
COMMD4-205ENST00000562310 COG5Q9UP83 839 aa15.13■□□□□ 0.01
COMMD4-205ENST00000562310 SAR1BQ9Y6B6 198 aa15.13■□□□□ 0.01
COMMD4-205ENST00000562310 PDE4DIPQ5VU43 2346 aa15.12■□□□□ 0.01
COMMD4-205ENST00000562310 ENC1O14682 589 aa15.12■□□□□ 0.01
COMMD4-205ENST00000562310 RIOK3O14730 519 aaKnown RBP15.12■□□□□ 0.01
COMMD4-205ENST00000562310 ATMINO43313 823 aaPredicted RBP15.12■□□□□ 0.01
COMMD4-205ENST00000562310 TRAPPC3O43617 180 aa15.12■□□□□ 0.01
COMMD4-205ENST00000562310 BUB1BO60566 1050 aaPredicted RBP15.12■□□□□ 0.01
COMMD4-205ENST00000562310 RAG1P15918 1043 aa15.12■□□□□ 0.01
COMMD4-205ENST00000562310 RRM1P23921 792 aa15.12■□□□□ 0.01
COMMD4-205ENST00000562310 SSTR3P32745 418 aaPredicted RBP15.12■□□□□ 0.01
COMMD4-205ENST00000562310 BCAT1P54687 386 aa15.12■□□□□ 0.01
COMMD4-205ENST00000562310 PDCLQ13371 301 aa15.12■□□□□ 0.01
COMMD4-205ENST00000562310 TCTN1Q2MV58 587 aa15.12■□□□□ 0.01
COMMD4-205ENST00000562310 TIGD5Q53EQ6 642 aa15.12■□□□□ 0.01
COMMD4-205ENST00000562310 DNAJC24Q6P3W2 148 aa15.12■□□□□ 0.01
COMMD4-205ENST00000562310 C3orf20Q8ND61 904 aa15.12■□□□□ 0.01
COMMD4-205ENST00000562310 STK32AQ8WU08 396 aa15.12■□□□□ 0.01
COMMD4-205ENST00000562310 CASD1Q96PB1 797 aa15.12■□□□□ 0.01
COMMD4-205ENST00000562310 PAAF1Q9BRP4 392 aa15.12■□□□□ 0.01
COMMD4-205ENST00000562310 SYNCQ9H7C4 482 aa15.12■□□□□ 0.01
COMMD4-205ENST00000562310 CYLDQ9NQC7 956 aa15.12■□□□□ 0.01
COMMD4-205ENST00000562310 PRDM5Q9NQX1 630 aaPredicted RBP15.12■□□□□ 0.01
COMMD4-205ENST00000562310 DDX43Q9NXZ2 648 aaKnown RBP15.12■□□□□ 0.01
COMMD4-205ENST00000562310 CACNG4Q9UBN1 327 aa15.12■□□□□ 0.01
COMMD4-205ENST00000562310 AMFRQ9UKV5 643 aa15.12■□□□□ 0.01
COMMD4-205ENST00000562310 CDH9Q9ULB4 789 aa15.12■□□□□ 0.01
COMMD4-205ENST00000562310 NME7Q9Y5B8 376 aa15.12■□□□□ 0.01
COMMD4-205ENST00000562310 MIF4GDA9UHW6 222 aaKnown RBP15.11■□□□□ 0.01
COMMD4-205ENST00000562310 CES2O00748 559 aa15.11■□□□□ 0.01
COMMD4-205ENST00000562310 DDHD2O94830 711 aa15.11■□□□□ 0.01
COMMD4-205ENST00000562310 SLU7O95391 586 aaKnown RBP15.11■□□□□ 0.01
COMMD4-205ENST00000562310 FTCDO95954 541 aa15.11■□□□□ 0.01
COMMD4-205ENST00000562310 PDGFRBP09619 1106 aa15.11■□□□□ 0.01
COMMD4-205ENST00000562310 GPD2P43304 727 aa15.11■□□□□ 0.01
COMMD4-205ENST00000562310 GABRB2P47870 512 aa15.11■□□□□ 0.01
COMMD4-205ENST00000562310 SLC8A3P57103 927 aa15.11■□□□□ 0.01
COMMD4-205ENST00000562310 CKAP4Q07065 602 aaKnown RBP15.11■□□□□ 0.01
COMMD4-205ENST00000562310 BST2Q10589 180 aaKnown RBP15.11■□□□□ 0.01
COMMD4-205ENST00000562310 RPS6KA1Q15418 735 aa15.11■□□□□ 0.01
COMMD4-205ENST00000562310 PKDCCQ504Y2 493 aa15.11■□□□□ 0.01
COMMD4-205ENST00000562310 PPP1R26Q5T8A7 1209 aaPredicted RBP15.11■□□□□ 0.01
COMMD4-205ENST00000562310 MFSD5Q6N075 450 aa15.11■□□□□ 0.01
COMMD4-205ENST00000562310 CD300LGQ6UXG3 332 aa15.11■□□□□ 0.01
COMMD4-205ENST00000562310 UBE2Q1Q7Z7E8 422 aa15.11■□□□□ 0.01
COMMD4-205ENST00000562310 ZNF280BQ86YH2 543 aa15.11■□□□□ 0.01
COMMD4-205ENST00000562310 WDTC1Q8N5D0 677 aa15.11■□□□□ 0.01
COMMD4-205ENST00000562310 CEP112Q8N8E3 955 aa15.11■□□□□ 0.01
COMMD4-205ENST00000562310 ANKRD52Q8NB46 1076 aa15.11■□□□□ 0.01
COMMD4-205ENST00000562310 MYRIPQ8NFW9 859 aa15.11■□□□□ 0.01
COMMD4-205ENST00000562310 C18orf8Q96DM3 657 aa15.11■□□□□ 0.01
COMMD4-205ENST00000562310 HNRNPABQ99729 332 aaKnown RBP15.11■□□□□ 0.01
COMMD4-205ENST00000562310 SYT15Q9BQS2 421 aa15.11■□□□□ 0.01
COMMD4-205ENST00000562310 COLEC11Q9BWP8 271 aa15.11■□□□□ 0.01
COMMD4-205ENST00000562310 TLR10Q9BXR5 811 aa15.11■□□□□ 0.01
COMMD4-205ENST00000562310 DPEP3Q9H4B8 488 aa15.11■□□□□ 0.01
COMMD4-205ENST00000562310 ABCB6Q9NP58 842 aa15.11■□□□□ 0.01
COMMD4-205ENST00000562310 FAM49BQ9NUQ9 324 aa15.11■□□□□ 0.01
COMMD4-205ENST00000562310 ALPK3Q96L96 1907 aa15.11■□□□□ 0.01
COMMD4-205ENST00000562310 CARNS1A5YM72 827 aa15.1■□□□□ 0.01
COMMD4-205ENST00000562310 BAIAP3O94812 1187 aa15.1■□□□□ 0.01
COMMD4-205ENST00000562310 AMHP03971 560 aa15.1■□□□□ 0.01
COMMD4-205ENST00000562310 PTPN1P18031 435 aaKnown RBP15.1■□□□□ 0.01
COMMD4-205ENST00000562310 LMO2P25791 158 aa15.1■□□□□ 0.01
COMMD4-205ENST00000562310 OR1G1P47890 313 aa15.1■□□□□ 0.01
COMMD4-205ENST00000562310 ELAVL2Q12926 359 aaKnown RBP15.1■□□□□ 0.01
COMMD4-205ENST00000562310 MAMLD1Q13495 774 aa15.1■□□□□ 0.01
COMMD4-205ENST00000562310 ZNF268Q14587 947 aaPredicted RBP15.1■□□□□ 0.01
COMMD4-205ENST00000562310 PTPN20Q4JDL3 420 aa15.1■□□□□ 0.01
COMMD4-205ENST00000562310 NT5DC3Q86UY8 548 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms