RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 ADAT2Q7Z6V5 191 aaKnown RBP12.31□□□□□ -0.44
PCAT1-202ENST00000561978 SERINC5Q86VE9 423 aa12.31□□□□□ -0.44
PCAT1-202ENST00000561978 DDX42Q86XP3 938 aaKnown RBP eCLIP12.31□□□□□ -0.44
PCAT1-202ENST00000561978 LRRC71Q8N4P6 559 aa12.31□□□□□ -0.44
PCAT1-202ENST00000561978 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.31□□□□□ -0.44
PCAT1-202ENST00000561978 PIK3R5Q8WYR1 880 aa12.31□□□□□ -0.44
PCAT1-202ENST00000561978 BADQ92934 168 aa12.31□□□□□ -0.44
PCAT1-202ENST00000561978 SCLYQ96I15 445 aa12.31□□□□□ -0.44
PCAT1-202ENST00000561978 ANKRD36BP1Q96IX9 119 aa12.31□□□□□ -0.44
PCAT1-202ENST00000561978 BTBD6Q96KE9 485 aa12.31□□□□□ -0.44
PCAT1-202ENST00000561978 PRMT7Q9NVM4 692 aaPredicted RBP12.31□□□□□ -0.44
PCAT1-202ENST00000561978 CHORDC1Q9UHD1 332 aaPredicted RBP12.31□□□□□ -0.44
PCAT1-202ENST00000561978 FEZ2Q9UHY8 353 aaPredicted RBP12.31□□□□□ -0.44
PCAT1-202ENST00000561978 FAM170AA1A519 330 aa12.3□□□□□ -0.44
PCAT1-202ENST00000561978 HMGB1P1B2RPK0 211 aaPredicted RBP12.3□□□□□ -0.44
PCAT1-202ENST00000561978 INO80B-WBP1J3KQ70 363 aa12.3□□□□□ -0.44
PCAT1-202ENST00000561978 KIAA0355O15063 1070 aa12.3□□□□□ -0.44
PCAT1-202ENST00000561978 IL18RAPO95256 599 aa12.3□□□□□ -0.44
PCAT1-202ENST00000561978 LSM8O95777 96 aaKnown RBP12.3□□□□□ -0.44
PCAT1-202ENST00000561978 RRM1P23921 792 aa12.3□□□□□ -0.44
PCAT1-202ENST00000561978 HSD17B3P37058 310 aa12.3□□□□□ -0.44
PCAT1-202ENST00000561978 THPOP40225 353 aa12.3□□□□□ -0.44
PCAT1-202ENST00000561978 NOMO3P69849 1222 aa12.3□□□□□ -0.44
PCAT1-202ENST00000561978 SATB1Q01826 763 aa12.3□□□□□ -0.44
PCAT1-202ENST00000561978 KYAT1Q16773 422 aa12.3□□□□□ -0.44
PCAT1-202ENST00000561978 CCDC137Q6PK04 289 aaKnown RBP12.3□□□□□ -0.44
PCAT1-202ENST00000561978 MTHFD1LQ6UB35 978 aa12.3□□□□□ -0.44
PCAT1-202ENST00000561978 JAMLQ86YT9 394 aa12.3□□□□□ -0.44
PCAT1-202ENST00000561978 PRELID2Q8N945 189 aa12.3□□□□□ -0.44
PCAT1-202ENST00000561978 C12orf50Q8NA57 414 aaPredicted RBP12.3□□□□□ -0.44
PCAT1-202ENST00000561978 ELMO3Q96BJ8 720 aa12.3□□□□□ -0.44
PCAT1-202ENST00000561978 FMO2Q99518 471 aa12.3□□□□□ -0.44
PCAT1-202ENST00000561978 INO80BQ9C086 356 aaPredicted RBP12.3□□□□□ -0.44
PCAT1-202ENST00000561978 ZNF518BQ9C0D4 1074 aa12.3□□□□□ -0.44
PCAT1-202ENST00000561978 NIF3L1Q9GZT8 377 aa12.3□□□□□ -0.44
PCAT1-202ENST00000561978 FAM49AQ9H0Q0 323 aaPredicted RBP12.3□□□□□ -0.44
PCAT1-202ENST00000561978 PTPRHQ9HD43 1115 aa12.3□□□□□ -0.44
PCAT1-202ENST00000561978 ERVK-5Q9HDB9 667 aa12.3□□□□□ -0.44
PCAT1-202ENST00000561978 HOMER3Q9NSC5 361 aa12.3□□□□□ -0.44
PCAT1-202ENST00000561978 PARVAQ9NVD7 372 aa12.3□□□□□ -0.44
PCAT1-202ENST00000561978 PLAAQ9Y263 795 aa12.3□□□□□ -0.44
PCAT1-202ENST00000561978 TNFSF13BQ9Y275 285 aa12.3□□□□□ -0.44
PCAT1-202ENST00000561978 LTBP2Q14767 1821 aa12.3□□□□□ -0.44
PCAT1-202ENST00000561978 MBLAC1A4D2B0 266 aaPredicted RBP12.3□□□□□ -0.44
PCAT1-202ENST00000561978 RRN3P2A6NIE6 340 aa12.3□□□□□ -0.44
PCAT1-202ENST00000561978 FSCN2O14926 492 aa12.3□□□□□ -0.44
PCAT1-202ENST00000561978 PROSCO94903 275 aa12.3□□□□□ -0.44
PCAT1-202ENST00000561978 TIMP1P01033 207 aa12.3□□□□□ -0.44
PCAT1-202ENST00000561978 CST3P01034 146 aaPredicted RBP12.3□□□□□ -0.44
PCAT1-202ENST00000561978 CTSHP09668 335 aa12.3□□□□□ -0.44
PCAT1-202ENST00000561978 TMEM191BP0C7N4 346 aa12.3□□□□□ -0.44
PCAT1-202ENST00000561978 TMOD1P28289 359 aa12.3□□□□□ -0.44
PCAT1-202ENST00000561978 MAN1A1P33908 653 aa12.3□□□□□ -0.44
PCAT1-202ENST00000561978 TNFSF9P41273 254 aa12.3□□□□□ -0.44
PCAT1-202ENST00000561978 PTGIRP43119 386 aa12.3□□□□□ -0.44
PCAT1-202ENST00000561978 PHKA2P46019 1235 aa12.3□□□□□ -0.44
PCAT1-202ENST00000561978 MARCKSL1P49006 195 aa12.3□□□□□ -0.44
PCAT1-202ENST00000561978 ZNF132P52740 706 aa12.3□□□□□ -0.44
PCAT1-202ENST00000561978 TMEM62Q0P6H9 643 aa12.3□□□□□ -0.44
PCAT1-202ENST00000561978 PTK7Q13308 1070 aa12.3□□□□□ -0.44
PCAT1-202ENST00000561978 ZSCAN26Q16670 478 aa12.3□□□□□ -0.44
PCAT1-202ENST00000561978 FAM187BQ17R55 369 aa12.3□□□□□ -0.44
PCAT1-202ENST00000561978 ZNF568Q3ZCX4 644 aa12.3□□□□□ -0.44
PCAT1-202ENST00000561978 SEZ6Q53EL9 994 aa12.3□□□□□ -0.44
PCAT1-202ENST00000561978 DNAJB3Q8WWF6 145 aa12.3□□□□□ -0.44
PCAT1-202ENST00000561978 ZNF606Q8WXB4 792 aa12.3□□□□□ -0.44
PCAT1-202ENST00000561978 NLRP4Q96MN2 994 aa12.3□□□□□ -0.44
PCAT1-202ENST00000561978 DPH5Q9H2P9 285 aa12.3□□□□□ -0.44
PCAT1-202ENST00000561978 LRRC19Q9H756 370 aa12.3□□□□□ -0.44
PCAT1-202ENST00000561978 ABLIM1O14639 778 aa12.29□□□□□ -0.44
PCAT1-202ENST00000561978 PSTPIP1O43586 416 aa12.29□□□□□ -0.44
PCAT1-202ENST00000561978 SHOX2O60902 331 aaPredicted RBP12.29□□□□□ -0.44
PCAT1-202ENST00000561978 C22orf31O95567 290 aa12.29□□□□□ -0.44
PCAT1-202ENST00000561978 KRT14P02533 472 aa12.29□□□□□ -0.44
PCAT1-202ENST00000561978 CALB1P05937 261 aa12.29□□□□□ -0.44
PCAT1-202ENST00000561978 MYZAPP0CAP1 466 aa12.29□□□□□ -0.44
PCAT1-202ENST00000561978 CKBP12277 381 aa12.29□□□□□ -0.44
PCAT1-202ENST00000561978 CSF2RAP15509 400 aa12.29□□□□□ -0.44
PCAT1-202ENST00000561978 COILP38432 576 aaPredicted RBP12.29□□□□□ -0.44
PCAT1-202ENST00000561978 CETN2P41208 172 aa12.29□□□□□ -0.44
PCAT1-202ENST00000561978 SSR1P43307 286 aaKnown RBP12.29□□□□□ -0.44
PCAT1-202ENST00000561978 MAGEA10P43363 369 aaPredicted RBP12.29□□□□□ -0.44
PCAT1-202ENST00000561978 EIF3BP55884 814 aaKnown RBP12.29□□□□□ -0.44
PCAT1-202ENST00000561978 ZNF618Q5T7W0 954 aa12.29□□□□□ -0.44
PCAT1-202ENST00000561978 EMC10Q5UCC4 262 aa12.29□□□□□ -0.44
PCAT1-202ENST00000561978 PLEKHA7Q6IQ23 1121 aa12.29□□□□□ -0.44
PCAT1-202ENST00000561978 SYDE1Q6ZW31 735 aaPredicted RBP12.29□□□□□ -0.44
PCAT1-202ENST00000561978 TMC3Q7Z5M5 1100 aa12.29□□□□□ -0.44
PCAT1-202ENST00000561978 CCDC105Q8IYK2 499 aa12.29□□□□□ -0.44
PCAT1-202ENST00000561978 UBR7Q8N806 425 aa12.29□□□□□ -0.44
PCAT1-202ENST00000561978 ARL8AQ96BM9 186 aa12.29□□□□□ -0.44
PCAT1-202ENST00000561978 FAM84AQ96KN4 292 aa12.29□□□□□ -0.44
PCAT1-202ENST00000561978 MTMR12Q9C0I1 747 aa12.29□□□□□ -0.44
PCAT1-202ENST00000561978 RPF1Q9H9Y2 349 aaKnown RBP12.29□□□□□ -0.44
PCAT1-202ENST00000561978 MTRF1LQ9UGC7 380 aaKnown RBP12.29□□□□□ -0.44
PCAT1-202ENST00000561978 COL1A2P08123 1366 aa12.29□□□□□ -0.44
PCAT1-202ENST00000561978 CLCN3P51790 818 aa12.29□□□□□ -0.44
PCAT1-202ENST00000561978 MYL6P60660 151 aa12.29□□□□□ -0.44
PCAT1-202ENST00000561978 SKOR1P84550 965 aa12.29□□□□□ -0.44
PCAT1-202ENST00000561978 TFAMQ00059 246 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms