RNA–Protein interactions for RNA: ENST00000561630.1

CDR2-202, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-202ENST00000561630 ARHGEF3Q9NR81 526 aa25.52■■□□□ 1.68
CDR2-202ENST00000561630 RMND1Q9NWS8 449 aa25.52■■□□□ 1.68
CDR2-202ENST00000561630 MYBPHLA2RUH7 354 aa25.51■■□□□ 1.67
CDR2-202ENST00000561630 MAPK13O15264 365 aa25.51■■□□□ 1.67
CDR2-202ENST00000561630 PHACTR2O75167 634 aa25.51■■□□□ 1.67
CDR2-202ENST00000561630 C4BPAP04003 597 aaKnown RBP25.51■■□□□ 1.67
CDR2-202ENST00000561630 NR2F2P24468 414 aa25.51■■□□□ 1.67
CDR2-202ENST00000561630 LMO2P25791 158 aa25.51■■□□□ 1.67
CDR2-202ENST00000561630 DLG4P78352 724 aa25.51■■□□□ 1.67
CDR2-202ENST00000561630 BIRC3Q13489 604 aa25.51■■□□□ 1.67
CDR2-202ENST00000561630 CFAP221Q4G0U5 840 aa25.51■■□□□ 1.67
CDR2-202ENST00000561630 PRSS33Q8NF86 280 aa25.51■■□□□ 1.67
CDR2-202ENST00000561630 ZSCAN18Q8TBC5 510 aaPredicted RBP25.51■■□□□ 1.67
CDR2-202ENST00000561630 GIPC2Q8TF65 315 aa25.51■■□□□ 1.67
CDR2-202ENST00000561630 SYAP1Q96A49 352 aaPredicted RBP25.51■■□□□ 1.67
CDR2-202ENST00000561630 GSDMAQ96QA5 445 aa25.51■■□□□ 1.67
CDR2-202ENST00000561630 SYT15Q9BQS2 421 aa25.51■■□□□ 1.67
CDR2-202ENST00000561630 VRTNQ9H8Y1 702 aa25.51■■□□□ 1.67
CDR2-202ENST00000561630 CDH9Q9ULB4 789 aa25.51■■□□□ 1.67
CDR2-202ENST00000561630 AOC1P19801 751 aa25.5■■□□□ 1.67
CDR2-202ENST00000561630 RPL13P26373 211 aaKnown RBP25.5■■□□□ 1.67
CDR2-202ENST00000561630 GABRR2P28476 465 aa25.5■■□□□ 1.67
CDR2-202ENST00000561630 TNNC1P63316 161 aa25.5■■□□□ 1.67
CDR2-202ENST00000561630 PFKPQ01813 784 aa25.5■■□□□ 1.67
CDR2-202ENST00000561630 TAF12Q16514 161 aa25.5■■□□□ 1.67
CDR2-202ENST00000561630 CCDC142Q17RM4 750 aa25.5■■□□□ 1.67
CDR2-202ENST00000561630 ZCWPW2Q504Y3 356 aa25.5■■□□□ 1.67
CDR2-202ENST00000561630 SMYD4Q8IYR2 804 aaPredicted RBP25.5■■□□□ 1.67
CDR2-202ENST00000561630 SPATA20Q8TB22 786 aa25.5■■□□□ 1.67
CDR2-202ENST00000561630 FUBP3Q96I24 572 aaKnown RBP eCLIP25.5■■□□□ 1.67
CDR2-202ENST00000561630 MRPL45Q9BRJ2 306 aaKnown RBP25.5■■□□□ 1.67
CDR2-202ENST00000561630 ATXN3LQ9H3M9 355 aa25.5■■□□□ 1.67
CDR2-202ENST00000561630 SLITRK6Q9H5Y7 841 aa25.5■■□□□ 1.67
CDR2-202ENST00000561630 IL21Q9HBE4 155 aa25.5■■□□□ 1.67
CDR2-202ENST00000561630 IKBKBO14920 756 aa25.49■■□□□ 1.67
CDR2-202ENST00000561630 ATP2C2O75185 946 aa25.49■■□□□ 1.67
CDR2-202ENST00000561630 AKAP3O75969 853 aa25.49■■□□□ 1.67
CDR2-202ENST00000561630 CYP2F1P24903 491 aa25.49■■□□□ 1.67
CDR2-202ENST00000561630 RPL10AP62906 217 aaKnown RBP25.49■■□□□ 1.67
CDR2-202ENST00000561630 NCOA4Q13772 614 aa25.49■■□□□ 1.67
CDR2-202ENST00000561630 SPATA2LQ8IUW3 424 aaPredicted RBP25.49■■□□□ 1.67
CDR2-202ENST00000561630 PI15O43692 258 aa25.48■■□□□ 1.67
CDR2-202ENST00000561630 SMC2O95347 1197 aa25.48■■□□□ 1.67
CDR2-202ENST00000561630 VNN1O95497 513 aa25.48■■□□□ 1.67
CDR2-202ENST00000561630 PDGFRBP09619 1106 aa25.48■■□□□ 1.67
CDR2-202ENST00000561630 HMGA1P17096 107 aaKnown RBP25.48■■□□□ 1.67
CDR2-202ENST00000561630 GNL1P36915 607 aaPredicted RBP25.48■■□□□ 1.67
CDR2-202ENST00000561630 VIPR2P41587 438 aa25.48■■□□□ 1.67
CDR2-202ENST00000561630 GPR15P49685 360 aa25.48■■□□□ 1.67
CDR2-202ENST00000561630 PSMC1P62191 440 aaKnown RBP25.48■■□□□ 1.67
CDR2-202ENST00000561630 ADAM9Q13443 819 aa25.48■■□□□ 1.67
CDR2-202ENST00000561630 MAPRE1Q15691 268 aaKnown RBP25.48■■□□□ 1.67
CDR2-202ENST00000561630 ZACNQ401N2 412 aa25.48■■□□□ 1.67
CDR2-202ENST00000561630 C1orf220Q5T0J3 134 aa25.48■■□□□ 1.67
CDR2-202ENST00000561630 STXBP5Q5T5C0 1151 aa25.48■■□□□ 1.67
CDR2-202ENST00000561630 PHLDB3Q6NSJ2 640 aa25.48■■□□□ 1.67
CDR2-202ENST00000561630 C4orf50Q6ZRC1 276 aa25.48■■□□□ 1.67
CDR2-202ENST00000561630 MKNK1Q9BUB5 465 aa25.48■■□□□ 1.67
CDR2-202ENST00000561630 SNX25Q9H3E2 840 aa25.48■■□□□ 1.67
CDR2-202ENST00000561630 TBC1D17Q9HA65 648 aa25.48■■□□□ 1.67
CDR2-202ENST00000561630 CRTAC1Q9NQ79 661 aa25.48■■□□□ 1.67
CDR2-202ENST00000561630 NXF1Q9UBU9 619 aaKnown RBP25.48■■□□□ 1.67
CDR2-202ENST00000561630 HOOK1Q9UJC3 728 aaKnown RBP25.48■■□□□ 1.67
CDR2-202ENST00000561630 PCDHA5Q9Y5H7 936 aa25.48■■□□□ 1.67
CDR2-202ENST00000561630 CDC25CP30307 473 aa25.47■■□□□ 1.67
CDR2-202ENST00000561630 MAGEA11P43364 429 aa25.47■■□□□ 1.67
CDR2-202ENST00000561630 VAMP7P51809 220 aa25.47■■□□□ 1.67
CDR2-202ENST00000561630 ENPEPQ07075 957 aa25.47■■□□□ 1.67
CDR2-202ENST00000561630 DDR2Q16832 855 aa25.47■■□□□ 1.67
CDR2-202ENST00000561630 ZNF699Q32M78 642 aa25.47■■□□□ 1.67
CDR2-202ENST00000561630 EDRF1Q3B7T1 1238 aa25.47■■□□□ 1.67
CDR2-202ENST00000561630 SLC44A4Q53GD3 710 aa25.47■■□□□ 1.67
CDR2-202ENST00000561630 COBLL1Q53SF7 1204 aa25.47■■□□□ 1.67
CDR2-202ENST00000561630 ZNF658Q5TYW1 1059 aaPredicted RBP25.47■■□□□ 1.67
CDR2-202ENST00000561630 INTS8Q75QN2 995 aaKnown RBP25.47■■□□□ 1.67
CDR2-202ENST00000561630 SV2AQ7L0J3 742 aa25.47■■□□□ 1.67
CDR2-202ENST00000561630 ELOA2Q8IYF1 753 aaPredicted RBP25.47■■□□□ 1.67
CDR2-202ENST00000561630 E2F7Q96AV8 911 aa25.47■■□□□ 1.67
CDR2-202ENST00000561630 SHDQ96IW2 340 aa25.47■■□□□ 1.67
CDR2-202ENST00000561630 NME7Q9Y5B8 376 aa25.47■■□□□ 1.67
CDR2-202ENST00000561630 KMT2EQ8IZD2 1858 aa25.47■■□□□ 1.67
CDR2-202ENST00000561630 STK25O00506 426 aa25.46■■□□□ 1.67
CDR2-202ENST00000561630 CSH1P0DML2 217 aa25.46■■□□□ 1.67
CDR2-202ENST00000561630 CSH2P0DML3 217 aa25.46■■□□□ 1.67
CDR2-202ENST00000561630 PSMC3P17980 439 aa25.46■■□□□ 1.67
CDR2-202ENST00000561630 PSMC2P35998 433 aaKnown RBP25.46■■□□□ 1.67
CDR2-202ENST00000561630 PTPN5P54829 565 aa25.46■■□□□ 1.67
CDR2-202ENST00000561630 STARD6P59095 220 aa25.46■■□□□ 1.67
CDR2-202ENST00000561630 TCF15Q12870 199 aa25.46■■□□□ 1.67
CDR2-202ENST00000561630 ARHGAP15Q53QZ3 475 aa25.46■■□□□ 1.67
CDR2-202ENST00000561630 GPR158Q5T848 1215 aa25.46■■□□□ 1.67
CDR2-202ENST00000561630 SDHAF4Q5VUM1 108 aa25.46■■□□□ 1.67
CDR2-202ENST00000561630 VITQ6UXI7 678 aa25.46■■□□□ 1.67
CDR2-202ENST00000561630 FAM186BQ8IYM0 893 aa25.46■■□□□ 1.67
CDR2-202ENST00000561630 OR6B3Q8NGW1 331 aa25.46■■□□□ 1.67
CDR2-202ENST00000561630 MYCBPAPQ8TBZ2 947 aa25.46■■□□□ 1.67
CDR2-202ENST00000561630 SMARCE1Q969G3 411 aa25.46■■□□□ 1.67
CDR2-202ENST00000561630 MYLPFQ96A32 169 aa25.46■■□□□ 1.67
CDR2-202ENST00000561630 GCNAQ96QF7 691 aa25.46■■□□□ 1.67
CDR2-202ENST00000561630 TRMT61BQ9BVS5 477 aaKnown RBP25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms