RNA–Protein interactions for RNA: ENST00000561517.5

CCDC113-203, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-203ENST00000561517 TRPV4Q9HBA0 871 aa16.58■□□□□ 0.24
CCDC113-203ENST00000561517 RMND1Q9NWS8 449 aa16.58■□□□□ 0.24
CCDC113-203ENST00000561517 GTF3C4Q9UKN8 822 aa16.58■□□□□ 0.24
CCDC113-203ENST00000561517 CDH9Q9ULB4 789 aa16.58■□□□□ 0.24
CCDC113-203ENST00000561517 PCDHA5Q9Y5H7 936 aa16.58■□□□□ 0.24
CCDC113-203ENST00000561517 MYH10P35580 1976 aa16.57■□□□□ 0.24
CCDC113-203ENST00000561517 MIA3Q5JRA6 1907 aa16.57■□□□□ 0.24
CCDC113-203ENST00000561517 A0A1W2PRU2 124 aa16.57■□□□□ 0.24
CCDC113-203ENST00000561517 MYBPHLA2RUH7 354 aa16.57■□□□□ 0.24
CCDC113-203ENST00000561517 IKBKBO14920 756 aa16.57■□□□□ 0.24
CCDC113-203ENST00000561517 PHACTR2O75167 634 aa16.57■□□□□ 0.24
CCDC113-203ENST00000561517 AKAP3O75969 853 aa16.57■□□□□ 0.24
CCDC113-203ENST00000561517 VNN1O95497 513 aa16.57■□□□□ 0.24
CCDC113-203ENST00000561517 LMO2P25791 158 aa16.57■□□□□ 0.24
CCDC113-203ENST00000561517 RPL13P26373 211 aaKnown RBP16.57■□□□□ 0.24
CCDC113-203ENST00000561517 CLCN5P51795 746 aa16.57■□□□□ 0.24
CCDC113-203ENST00000561517 MCCD1P59942 119 aaPredicted RBP16.57■□□□□ 0.24
CCDC113-203ENST00000561517 ENPEPQ07075 957 aa16.57■□□□□ 0.24
CCDC113-203ENST00000561517 BIRC3Q13489 604 aa16.57■□□□□ 0.24
CCDC113-203ENST00000561517 CCDC142Q17RM4 750 aa16.57■□□□□ 0.24
CCDC113-203ENST00000561517 EDRF1Q3B7T1 1238 aa16.57■□□□□ 0.24
CCDC113-203ENST00000561517 ZACNQ401N2 412 aa16.57■□□□□ 0.24
CCDC113-203ENST00000561517 CFAP221Q4G0U5 840 aa16.57■□□□□ 0.24
CCDC113-203ENST00000561517 C1orf220Q5T0J3 134 aa16.57■□□□□ 0.24
CCDC113-203ENST00000561517 IER5LQ5T953 404 aa16.57■□□□□ 0.24
CCDC113-203ENST00000561517 CWF19L1Q69YN2 538 aaKnown RBP16.57■□□□□ 0.24
CCDC113-203ENST00000561517 ASTLQ6HA08 431 aaPredicted RBP16.57■□□□□ 0.24
CCDC113-203ENST00000561517 SMYD4Q8IYR2 804 aaPredicted RBP16.57■□□□□ 0.24
CCDC113-203ENST00000561517 SMARCD2Q92925 531 aa16.57■□□□□ 0.24
CCDC113-203ENST00000561517 FUBP3Q96I24 572 aaKnown RBP eCLIP16.57■□□□□ 0.24
CCDC113-203ENST00000561517 SYT15Q9BQS2 421 aa16.57■□□□□ 0.24
CCDC113-203ENST00000561517 PI4K2AQ9BTU6 479 aa16.57■□□□□ 0.24
CCDC113-203ENST00000561517 PLA2G2FQ9BZM2 168 aa16.57■□□□□ 0.24
CCDC113-203ENST00000561517 MFSD1Q9H3U5 465 aa16.57■□□□□ 0.24
CCDC113-203ENST00000561517 IL21Q9HBE4 155 aa16.57■□□□□ 0.24
CCDC113-203ENST00000561517 ZFP14Q9HCL3 533 aa16.57■□□□□ 0.24
CCDC113-203ENST00000561517 PIEZO1Q92508 2521 aa16.57■□□□□ 0.24
CCDC113-203ENST00000561517 ATP2C2O75185 946 aa16.56■□□□□ 0.24
CCDC113-203ENST00000561517 SMC2O95347 1197 aa16.56■□□□□ 0.24
CCDC113-203ENST00000561517 CYP2F1P24903 491 aa16.56■□□□□ 0.24
CCDC113-203ENST00000561517 GNL1P36915 607 aaPredicted RBP16.56■□□□□ 0.24
CCDC113-203ENST00000561517 PRCPP42785 496 aa16.56■□□□□ 0.24
CCDC113-203ENST00000561517 NUBP1P53384 320 aa16.56■□□□□ 0.24
CCDC113-203ENST00000561517 TNNC1P63316 161 aa16.56■□□□□ 0.24
CCDC113-203ENST00000561517 ADAM9Q13443 819 aa16.56■□□□□ 0.24
CCDC113-203ENST00000561517 NCOA4Q13772 614 aa16.56■□□□□ 0.24
CCDC113-203ENST00000561517 ZNF658Q5TYW1 1059 aaPredicted RBP16.56■□□□□ 0.24
CCDC113-203ENST00000561517 INTS8Q75QN2 995 aaKnown RBP16.56■□□□□ 0.24
CCDC113-203ENST00000561517 SV2AQ7L0J3 742 aa16.56■□□□□ 0.24
CCDC113-203ENST00000561517 TMEM105Q8N8V8 129 aa16.56■□□□□ 0.24
CCDC113-203ENST00000561517 ZSCAN18Q8TBC5 510 aaPredicted RBP16.56■□□□□ 0.24
CCDC113-203ENST00000561517 FAM200AQ8TCP9 573 aa16.56■□□□□ 0.24
CCDC113-203ENST00000561517 GIPC2Q8TF65 315 aa16.56■□□□□ 0.24
CCDC113-203ENST00000561517 SMARCE1Q969G3 411 aa16.56■□□□□ 0.24
CCDC113-203ENST00000561517 PRRX2Q99811 253 aa16.56■□□□□ 0.24
CCDC113-203ENST00000561517 MRPL45Q9BRJ2 306 aaKnown RBP16.56■□□□□ 0.24
CCDC113-203ENST00000561517 MKNK1Q9BUB5 465 aa16.56■□□□□ 0.24
CCDC113-203ENST00000561517 GTPBP4Q9BZE4 634 aaKnown RBP16.56■□□□□ 0.24
CCDC113-203ENST00000561517 CRTAC1Q9NQ79 661 aa16.56■□□□□ 0.24
CCDC113-203ENST00000561517 HOOK1Q9UJC3 728 aaKnown RBP16.56■□□□□ 0.24
CCDC113-203ENST00000561517 CA14Q9ULX7 337 aa16.56■□□□□ 0.24
CCDC113-203ENST00000561517 NME7Q9Y5B8 376 aa16.56■□□□□ 0.24
CCDC113-203ENST00000561517 CACNA1IQ9P0X4 2223 aa16.55■□□□□ 0.24
CCDC113-203ENST00000561517 GADD45BO75293 160 aaPredicted RBP16.55■□□□□ 0.24
CCDC113-203ENST00000561517 PDGFRBP09619 1106 aa16.55■□□□□ 0.24
CCDC113-203ENST00000561517 CSH1P0DML2 217 aa16.55■□□□□ 0.24
CCDC113-203ENST00000561517 CSH2P0DML3 217 aa16.55■□□□□ 0.24
CCDC113-203ENST00000561517 HMGA1P17096 107 aaKnown RBP16.55■□□□□ 0.24
CCDC113-203ENST00000561517 AOC1P19801 751 aa16.55■□□□□ 0.24
CCDC113-203ENST00000561517 GABRR2P28476 465 aa16.55■□□□□ 0.24
CCDC113-203ENST00000561517 CDC25CP30307 473 aa16.55■□□□□ 0.24
CCDC113-203ENST00000561517 PSMC2P35998 433 aaKnown RBP16.55■□□□□ 0.24
CCDC113-203ENST00000561517 MAGEA11P43364 429 aa16.55■□□□□ 0.24
CCDC113-203ENST00000561517 GPR15P49685 360 aa16.55■□□□□ 0.24
CCDC113-203ENST00000561517 VAMP7P51809 220 aa16.55■□□□□ 0.24
CCDC113-203ENST00000561517 RPL10AP62906 217 aaKnown RBP16.55■□□□□ 0.24
CCDC113-203ENST00000561517 MAPRE1Q15691 268 aaKnown RBP16.55■□□□□ 0.24
CCDC113-203ENST00000561517 ZNF699Q32M78 642 aa16.55■□□□□ 0.24
CCDC113-203ENST00000561517 PHLDB3Q6NSJ2 640 aa16.55■□□□□ 0.24
CCDC113-203ENST00000561517 C4orf50Q6ZRC1 276 aa16.55■□□□□ 0.24
CCDC113-203ENST00000561517 SPATA2LQ8IUW3 424 aaPredicted RBP16.55■□□□□ 0.24
CCDC113-203ENST00000561517 FAM186BQ8IYM0 893 aa16.55■□□□□ 0.24
CCDC113-203ENST00000561517 FLCNQ8NFG4 579 aa16.55■□□□□ 0.24
CCDC113-203ENST00000561517 ERCC4Q92889 916 aaPredicted RBP16.55■□□□□ 0.24
CCDC113-203ENST00000561517 SNX25Q9H3E2 840 aa16.55■□□□□ 0.24
CCDC113-203ENST00000561517 ARHGEF3Q9NR81 526 aa16.55■□□□□ 0.24
CCDC113-203ENST00000561517 CHMP5Q9NZZ3 219 aa16.55■□□□□ 0.24
CCDC113-203ENST00000561517 NXF1Q9UBU9 619 aaKnown RBP16.55■□□□□ 0.24
CCDC113-203ENST00000561517 TICRRQ7Z2Z1 1910 aa16.55■□□□□ 0.24
CCDC113-203ENST00000561517 COL4A2P08572 1712 aa16.54■□□□□ 0.24
CCDC113-203ENST00000561517 WEE1P30291 646 aa16.54■□□□□ 0.24
CCDC113-203ENST00000561517 PLA2G5P39877 138 aa16.54■□□□□ 0.24
CCDC113-203ENST00000561517 PSMC1P62191 440 aaKnown RBP16.54■□□□□ 0.24
CCDC113-203ENST00000561517 PFKPQ01813 784 aa16.54■□□□□ 0.24
CCDC113-203ENST00000561517 TAF12Q16514 161 aa16.54■□□□□ 0.24
CCDC113-203ENST00000561517 SGSM1Q2NKQ1 1148 aa16.54■□□□□ 0.24
CCDC113-203ENST00000561517 ZNF667Q5HYK9 610 aa16.54■□□□□ 0.24
CCDC113-203ENST00000561517 STXBP5Q5T5C0 1151 aa16.54■□□□□ 0.24
CCDC113-203ENST00000561517 PRSS33Q8NF86 280 aa16.54■□□□□ 0.24
CCDC113-203ENST00000561517 OR6B3Q8NGW1 331 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms