RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 CYP27B1O15528 508 aa4.53□□□□□ -1.68
HERC1-215ENST00000561436 HAUS5O94927 633 aa4.53□□□□□ -1.68
HERC1-215ENST00000561436 ANXA1P04083 346 aa4.53□□□□□ -1.68
HERC1-215ENST00000561436 MYL3P08590 195 aa4.53□□□□□ -1.68
HERC1-215ENST00000561436 BRAFP15056 766 aa4.53□□□□□ -1.68
HERC1-215ENST00000561436 NR4A1P22736 598 aa4.53□□□□□ -1.68
HERC1-215ENST00000561436 ZFP36P26651 326 aaKnown RBP4.53□□□□□ -1.68
HERC1-215ENST00000561436 RAP2BP61225 183 aa4.53□□□□□ -1.68
HERC1-215ENST00000561436 FAM189BP81408 668 aa4.53□□□□□ -1.68
HERC1-215ENST00000561436 BTKQ06187 659 aa4.53□□□□□ -1.68
HERC1-215ENST00000561436 TUBA3CQ13748 450 aa4.53□□□□□ -1.68
HERC1-215ENST00000561436 LONRF1Q17RB8 773 aa4.53□□□□□ -1.68
HERC1-215ENST00000561436 ATXN7L2Q5T6C5 722 aaPredicted RBP4.53□□□□□ -1.68
HERC1-215ENST00000561436 TUBA3EQ6PEY2 450 aa4.53□□□□□ -1.68
HERC1-215ENST00000561436 APOA5Q6Q788 366 aa4.53□□□□□ -1.68
HERC1-215ENST00000561436 KRT27Q7Z3Y8 459 aa4.53□□□□□ -1.68
HERC1-215ENST00000561436 SYT12Q8IV01 421 aa4.53□□□□□ -1.68
HERC1-215ENST00000561436 IL17RDQ8NFM7 739 aa4.53□□□□□ -1.68
HERC1-215ENST00000561436 OR6B3Q8NGW1 331 aa4.53□□□□□ -1.68
HERC1-215ENST00000561436 CPT1CQ8TCG5 803 aa4.53□□□□□ -1.68
HERC1-215ENST00000561436 DDX17Q92841 729 aaKnown RBP4.53□□□□□ -1.68
HERC1-215ENST00000561436 GJA10Q969M2 543 aa4.53□□□□□ -1.68
HERC1-215ENST00000561436 PHACTR3Q96KR7 559 aa4.53□□□□□ -1.68
HERC1-215ENST00000561436 MRPL46Q9H2W6 279 aaKnown RBP4.53□□□□□ -1.68
HERC1-215ENST00000561436 BRD9Q9H8M2 597 aa4.53□□□□□ -1.68
HERC1-215ENST00000561436 ZMAT3Q9HA38 289 aaKnown RBP4.53□□□□□ -1.68
HERC1-215ENST00000561436 PNPLA8Q9NP80 782 aa4.53□□□□□ -1.68
HERC1-215ENST00000561436 NLRC4Q9NPP4 1024 aa4.53□□□□□ -1.68
HERC1-215ENST00000561436 KLHL11Q9NVR0 708 aa4.53□□□□□ -1.68
HERC1-215ENST00000561436 MYOM2P54296 1465 aa4.53□□□□□ -1.68
HERC1-215ENST00000561436 PIK3C2BO00750 1634 aa4.53□□□□□ -1.68
HERC1-215ENST00000561436 SETBP1Q9Y6X0 1596 aa4.53□□□□□ -1.69
HERC1-215ENST00000561436 SBNO1A3KN83 1393 aa4.53□□□□□ -1.69
HERC1-215ENST00000561436 ATRNL1Q5VV63 1379 aa4.53□□□□□ -1.69
HERC1-215ENST00000561436 PARD3Q8TEW0 1356 aa4.53□□□□□ -1.69
HERC1-215ENST00000561436 ABCC11Q96J66 1382 aa4.53□□□□□ -1.69
HERC1-215ENST00000561436 SPATA31A3Q5VYP0 1347 aa4.52□□□□□ -1.69
HERC1-215ENST00000561436 TBKBP1A7MCY6 615 aa4.52□□□□□ -1.69
HERC1-215ENST00000561436 NT5C1B-RDH14C9J2C7 533 aa4.52□□□□□ -1.69
HERC1-215ENST00000561436 FZD7O75084 574 aa4.52□□□□□ -1.69
HERC1-215ENST00000561436 SCAF4O95104 1147 aaKnown RBP4.52□□□□□ -1.69
HERC1-215ENST00000561436 MYF5P13349 255 aa4.52□□□□□ -1.69
HERC1-215ENST00000561436 ACVRL1P37023 503 aa4.52□□□□□ -1.69
HERC1-215ENST00000561436 GDF5P43026 501 aa4.52□□□□□ -1.69
HERC1-215ENST00000561436 MORC3Q14149 939 aa4.52□□□□□ -1.69
HERC1-215ENST00000561436 CCDC93Q567U6 631 aa4.52□□□□□ -1.69
HERC1-215ENST00000561436 METTL24Q5JXM2 366 aa4.52□□□□□ -1.69
HERC1-215ENST00000561436 EMC10Q5UCC4 262 aa4.52□□□□□ -1.69
HERC1-215ENST00000561436 ZNF783Q6ZMS7 281 aa4.52□□□□□ -1.69
HERC1-215ENST00000561436 ZNF627Q7L945 461 aa4.52□□□□□ -1.69
HERC1-215ENST00000561436 SRLQ86TD4 932 aa4.52□□□□□ -1.69
HERC1-215ENST00000561436 DPP9Q86TI2 863 aa4.52□□□□□ -1.69
HERC1-215ENST00000561436 FAM90A1Q86YD7 464 aa4.52□□□□□ -1.69
HERC1-215ENST00000561436 FITM2Q8N6M3 262 aa4.52□□□□□ -1.69
HERC1-215ENST00000561436 OR52N2Q8NGI0 321 aa4.52□□□□□ -1.69
HERC1-215ENST00000561436 PLBD2Q8NHP8 589 aa4.52□□□□□ -1.69
HERC1-215ENST00000561436 IL31RAQ8NI17 732 aa4.52□□□□□ -1.69
HERC1-215ENST00000561436 KBTBD7Q8WVZ9 684 aa4.52□□□□□ -1.69
HERC1-215ENST00000561436 NEU4Q8WWR8 484 aaPredicted RBP4.52□□□□□ -1.69
HERC1-215ENST00000561436 ZC3H10Q96K80 434 aaKnown RBP4.52□□□□□ -1.69
HERC1-215ENST00000561436 CCDC138Q96M89 665 aa4.52□□□□□ -1.69
HERC1-215ENST00000561436 SELENOOQ9BVL4 669 aa4.52□□□□□ -1.69
HERC1-215ENST00000561436 C22orf23Q9BZE7 217 aa4.52□□□□□ -1.69
HERC1-215ENST00000561436 NRDE2Q9H7Z3 1164 aa4.52□□□□□ -1.69
HERC1-215ENST00000561436 RSAD1Q9HA92 442 aa4.52□□□□□ -1.69
HERC1-215ENST00000561436 GPRC5BQ9NZH0 403 aa4.52□□□□□ -1.69
HERC1-215ENST00000561436 JKAMPQ9P055 326 aa4.52□□□□□ -1.69
HERC1-215ENST00000561436 POGKQ9P215 609 aa4.52□□□□□ -1.69
HERC1-215ENST00000561436 PCDHA6Q9UN73 950 aa4.52□□□□□ -1.69
HERC1-215ENST00000561436 STRCP1A6NGW2 1772 aa4.52□□□□□ -1.69
HERC1-215ENST00000561436 ARHGEF10O15013 1369 aa4.52□□□□□ -1.69
HERC1-215ENST00000561436 ANKRD30BQ9BXX2 1392 aa4.52□□□□□ -1.69
HERC1-215ENST00000561436 SHPRHQ149N8 1683 aa4.51□□□□□ -1.69
HERC1-215ENST00000561436 TCRBV7S2A1N4TA0A589 114 aa4.51□□□□□ -1.69
HERC1-215ENST00000561436 MYO1CO00159 1063 aa4.51□□□□□ -1.69
HERC1-215ENST00000561436 ZNF185O15231 689 aa4.51□□□□□ -1.69
HERC1-215ENST00000561436 TBC1D4O60343 1298 aa4.51□□□□□ -1.69
HERC1-215ENST00000561436 SLC43A1O75387 559 aa4.51□□□□□ -1.69
HERC1-215ENST00000561436 CHEK2O96017 543 aa4.51□□□□□ -1.69
HERC1-215ENST00000561436 LDHAP00338 332 aaKnown RBP4.51□□□□□ -1.69
HERC1-215ENST00000561436 THP07101 528 aa4.51□□□□□ -1.69
HERC1-215ENST00000561436 GJB1P08034 283 aa4.51□□□□□ -1.69
HERC1-215ENST00000561436 KITP10721 976 aa4.51□□□□□ -1.69
HERC1-215ENST00000561436 RARBP10826 455 aa4.51□□□□□ -1.69
HERC1-215ENST00000561436 HTR3AP46098 478 aa4.51□□□□□ -1.69
HERC1-215ENST00000561436 SOX8P57073 446 aa4.51□□□□□ -1.69
HERC1-215ENST00000561436 RNASE9P60153 205 aaKnown RBP4.51□□□□□ -1.69
HERC1-215ENST00000561436 NOMO3P69849 1222 aa4.51□□□□□ -1.69
HERC1-215ENST00000561436 SATB1Q01826 763 aa4.51□□□□□ -1.69
HERC1-215ENST00000561436 BMT2Q1RMZ1 405 aa4.51□□□□□ -1.69
HERC1-215ENST00000561436 RABL3Q5HYI8 236 aa4.51□□□□□ -1.69
HERC1-215ENST00000561436 ZNF365Q70YC5 407 aa4.51□□□□□ -1.69
HERC1-215ENST00000561436 UBE3BQ7Z3V4 1068 aa4.51□□□□□ -1.69
HERC1-215ENST00000561436 MORC1Q86VD1 984 aa4.51□□□□□ -1.69
HERC1-215ENST00000561436 PPP1R3BQ86XI6 285 aa4.51□□□□□ -1.69
HERC1-215ENST00000561436 PDSS2Q86YH6 399 aa4.51□□□□□ -1.69
HERC1-215ENST00000561436 OR10H5Q8NGA6 315 aa4.51□□□□□ -1.69
HERC1-215ENST00000561436 PARD3BQ8TEW8 1205 aa4.51□□□□□ -1.69
HERC1-215ENST00000561436 PHKBQ93100 1093 aa4.51□□□□□ -1.69
HERC1-215ENST00000561436 NT5C1BQ96P26 610 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms