RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 TNNI1P19237 187 aa18.46■□□□□ 0.55
CDC42BPB-208ENST00000561271 GDI1P31150 447 aa18.46■□□□□ 0.55
CDC42BPB-208ENST00000561271 SNRPFP62306 86 aaKnown RBP18.46■□□□□ 0.55
CDC42BPB-208ENST00000561271 SMARCB1Q12824 385 aa18.46■□□□□ 0.55
CDC42BPB-208ENST00000561271 STK4Q13043 487 aa18.46■□□□□ 0.55
CDC42BPB-208ENST00000561271 PSMD6Q15008 389 aa18.46■□□□□ 0.55
CDC42BPB-208ENST00000561271 NFE2Q16621 373 aaPredicted RBP18.46■□□□□ 0.55
CDC42BPB-208ENST00000561271 SOWAHAQ2M3V2 549 aa18.46■□□□□ 0.55
CDC42BPB-208ENST00000561271 GPR158Q5T848 1215 aa18.46■□□□□ 0.55
CDC42BPB-208ENST00000561271 SDHAF4Q5VUM1 108 aa18.46■□□□□ 0.55
CDC42BPB-208ENST00000561271 TRAPPC11Q7Z392 1133 aa18.46■□□□□ 0.55
CDC42BPB-208ENST00000561271 DNASE1L2Q92874 299 aa18.46■□□□□ 0.55
CDC42BPB-208ENST00000561271 FNBP1Q96RU3 617 aa18.46■□□□□ 0.55
CDC42BPB-208ENST00000561271 PKMYT1Q99640 499 aa18.46■□□□□ 0.55
CDC42BPB-208ENST00000561271 ACBD6Q9BR61 282 aa18.46■□□□□ 0.55
CDC42BPB-208ENST00000561271 GPR88Q9GZN0 384 aa18.46■□□□□ 0.55
CDC42BPB-208ENST00000561271 GZF1Q9H116 711 aaPredicted RBP18.46■□□□□ 0.55
CDC42BPB-208ENST00000561271 TRPV4Q9HBA0 871 aa18.46■□□□□ 0.55
CDC42BPB-208ENST00000561271 IL21Q9HBE4 155 aa18.46■□□□□ 0.55
CDC42BPB-208ENST00000561271 LTB4R2Q9NPC1 389 aa18.46■□□□□ 0.55
CDC42BPB-208ENST00000561271 MTF2Q9Y483 593 aaPredicted RBP18.46■□□□□ 0.55
CDC42BPB-208ENST00000561271 DMDP11532 3685 aa18.45■□□□□ 0.54
CDC42BPB-208ENST00000561271 PRPF40AO75400 957 aaKnown RBP18.45■□□□□ 0.54
CDC42BPB-208ENST00000561271 FGF19O95750 216 aa18.45■□□□□ 0.54
CDC42BPB-208ENST00000561271 SYKP43405 635 aa18.45■□□□□ 0.54
CDC42BPB-208ENST00000561271 CASP4P49662 377 aa18.45■□□□□ 0.54
CDC42BPB-208ENST00000561271 NDUFA8P51970 172 aa18.45■□□□□ 0.54
CDC42BPB-208ENST00000561271 PSMC1P62191 440 aaKnown RBP18.45■□□□□ 0.54
CDC42BPB-208ENST00000561271 TAF12Q16514 161 aa18.45■□□□□ 0.54
CDC42BPB-208ENST00000561271 FRMD5Q7Z6J6 570 aa18.45■□□□□ 0.54
CDC42BPB-208ENST00000561271 C12orf56Q8IXR9 622 aa18.45■□□□□ 0.54
CDC42BPB-208ENST00000561271 FSIP1Q8NA03 581 aa18.45■□□□□ 0.54
CDC42BPB-208ENST00000561271 DEPDC1BQ8WUY9 529 aa18.45■□□□□ 0.54
CDC42BPB-208ENST00000561271 KBTBD7Q8WVZ9 684 aa18.45■□□□□ 0.54
CDC42BPB-208ENST00000561271 GCNAQ96QF7 691 aa18.45■□□□□ 0.54
CDC42BPB-208ENST00000561271 GDPD2Q9HCC8 539 aa18.45■□□□□ 0.54
CDC42BPB-208ENST00000561271 CGNQ9P2M7 1197 aaKnown RBP18.45■□□□□ 0.54
CDC42BPB-208ENST00000561271 USP25Q9UHP3 1055 aa18.45■□□□□ 0.54
CDC42BPB-208ENST00000561271 GTF3C4Q9UKN8 822 aa18.45■□□□□ 0.54
CDC42BPB-208ENST00000561271 ATP6V1DQ9Y5K8 247 aa18.45■□□□□ 0.54
CDC42BPB-208ENST00000561271 RALGAPA1Q6GYQ0 2036 aa18.45■□□□□ 0.54
CDC42BPB-208ENST00000561271 SPAG17Q6Q759 2223 aa18.44■□□□□ 0.54
CDC42BPB-208ENST00000561271 GABRDO14764 452 aa18.44■□□□□ 0.54
CDC42BPB-208ENST00000561271 EXOC3O60645 756 aa18.44■□□□□ 0.54
CDC42BPB-208ENST00000561271 PRAMEF12O95522 483 aa18.44■□□□□ 0.54
CDC42BPB-208ENST00000561271 CYP2F1P24903 491 aa18.44■□□□□ 0.54
CDC42BPB-208ENST00000561271 TARSP26639 723 aaKnown RBP18.44■□□□□ 0.54
CDC42BPB-208ENST00000561271 PCSK1P29120 753 aa18.44■□□□□ 0.54
CDC42BPB-208ENST00000561271 NBL1P41271 181 aa18.44■□□□□ 0.54
CDC42BPB-208ENST00000561271 LHX1P48742 406 aa18.44■□□□□ 0.54
CDC42BPB-208ENST00000561271 ARHGAP15Q53QZ3 475 aa18.44■□□□□ 0.54
CDC42BPB-208ENST00000561271 ARID3BQ8IVW6 561 aaPredicted RBP18.44■□□□□ 0.54
CDC42BPB-208ENST00000561271 SPATA18Q8TC71 538 aa18.44■□□□□ 0.54
CDC42BPB-208ENST00000561271 PLEKHO2Q8TD55 490 aa18.44■□□□□ 0.54
CDC42BPB-208ENST00000561271 IRF7Q92985 503 aa18.44■□□□□ 0.54
CDC42BPB-208ENST00000561271 SYT15Q9BQS2 421 aa18.44■□□□□ 0.54
CDC42BPB-208ENST00000561271 GOLPH3LQ9H4A5 285 aa18.44■□□□□ 0.54
CDC42BPB-208ENST00000561271 WDR87Q6ZQQ6 2873 aa18.44■□□□□ 0.54
CDC42BPB-208ENST00000561271 GVINP1Q7Z2Y8 2422 aa18.44■□□□□ 0.54
CDC42BPB-208ENST00000561271 CFAP54Q96N23 3096 aa18.43■□□□□ 0.54
CDC42BPB-208ENST00000561271 SPTBN4Q9H254 2564 aa18.43■□□□□ 0.54
CDC42BPB-208ENST00000561271 EML5Q05BV3 1969 aa18.43■□□□□ 0.54
CDC42BPB-208ENST00000561271 FAM237AA0A1B0GTK4 181 aa18.43■□□□□ 0.54
CDC42BPB-208ENST00000561271 MYBPHLA2RUH7 354 aa18.43■□□□□ 0.54
CDC42BPB-208ENST00000561271 SHISA7A6NL88 538 aa18.43■□□□□ 0.54
CDC42BPB-208ENST00000561271 GFRA3O60609 400 aa18.43■□□□□ 0.54
CDC42BPB-208ENST00000561271 ATP2C2O75185 946 aa18.43■□□□□ 0.54
CDC42BPB-208ENST00000561271 CDC25CP30307 473 aa18.43■□□□□ 0.54
CDC42BPB-208ENST00000561271 LIMS2Q7Z4I7 341 aa18.43■□□□□ 0.54
CDC42BPB-208ENST00000561271 MFSD6LQ8IWD5 586 aa18.43■□□□□ 0.54
CDC42BPB-208ENST00000561271 GOLGA5Q8TBA6 731 aa18.43■□□□□ 0.54
CDC42BPB-208ENST00000561271 ZNF516Q92618 1163 aa18.43■□□□□ 0.54
CDC42BPB-208ENST00000561271 SCAND2PQ9GZW5 306 aaPredicted RBP18.43■□□□□ 0.54
CDC42BPB-208ENST00000561271 ABCB6Q9NP58 842 aa18.43■□□□□ 0.54
CDC42BPB-208ENST00000561271 MAGED2Q9UNF1 606 aaPredicted RBP18.43■□□□□ 0.54
CDC42BPB-208ENST00000561271 EP300Q09472 2414 aaPredicted RBP18.42■□□□□ 0.54
CDC42BPB-208ENST00000561271 OTOGLQ3ZCN5 2332 aa18.42■□□□□ 0.54
CDC42BPB-208ENST00000561271 FAM170BA6NMN3 283 aa18.42■□□□□ 0.54
CDC42BPB-208ENST00000561271 ARNTLO00327 626 aa18.42■□□□□ 0.54
CDC42BPB-208ENST00000561271 ZNF263O14978 683 aa18.42■□□□□ 0.54
CDC42BPB-208ENST00000561271 CST3P01034 146 aaPredicted RBP18.42■□□□□ 0.54
CDC42BPB-208ENST00000561271 RPN1P04843 607 aaKnown RBP18.42■□□□□ 0.54
CDC42BPB-208ENST00000561271 HMGA1P17096 107 aaKnown RBP18.42■□□□□ 0.54
CDC42BPB-208ENST00000561271 LMO2P25791 158 aa18.42■□□□□ 0.54
CDC42BPB-208ENST00000561271 NLRP12P59046 1061 aa18.42■□□□□ 0.54
CDC42BPB-208ENST00000561271 DDR2Q16832 855 aa18.42■□□□□ 0.54
CDC42BPB-208ENST00000561271 DPH6Q7L8W6 267 aa18.42■□□□□ 0.54
CDC42BPB-208ENST00000561271 TMEM150AQ86TG1 271 aa18.42■□□□□ 0.54
CDC42BPB-208ENST00000561271 SPATA2LQ8IUW3 424 aaPredicted RBP18.42■□□□□ 0.54
CDC42BPB-208ENST00000561271 YAF2Q8IY57 180 aa18.42■□□□□ 0.54
CDC42BPB-208ENST00000561271 MYLPFQ96A32 169 aa18.42■□□□□ 0.54
CDC42BPB-208ENST00000561271 E2F7Q96AV8 911 aa18.42■□□□□ 0.54
CDC42BPB-208ENST00000561271 MMS19Q96T76 1030 aa18.42■□□□□ 0.54
CDC42BPB-208ENST00000561271 MRPL45Q9BRJ2 306 aaKnown RBP18.42■□□□□ 0.54
CDC42BPB-208ENST00000561271 SMG9Q9H0W8 520 aaKnown RBP18.42■□□□□ 0.54
CDC42BPB-208ENST00000561271 KCTD10Q9H3F6 313 aa18.42■□□□□ 0.54
CDC42BPB-208ENST00000561271 TASP1Q9H6P5 420 aa18.42■□□□□ 0.54
CDC42BPB-208ENST00000561271 CRTAC1Q9NQ79 661 aa18.42■□□□□ 0.54
CDC42BPB-208ENST00000561271 NDRG2Q9UN36 371 aaKnown RBP18.42■□□□□ 0.54
CDC42BPB-208ENST00000561271 NME7Q9Y5B8 376 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms