RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 SNX9Q9Y5X1 595 aa17.43■□□□□ 0.38
SNX1-213ENST00000561026 TCHHQ07283 1943 aa17.42■□□□□ 0.38
SNX1-213ENST00000561026 MYBPHLA2RUH7 354 aa17.42■□□□□ 0.38
SNX1-213ENST00000561026 ZNF233A6NK53 670 aa17.42■□□□□ 0.38
SNX1-213ENST00000561026 GABRDO14764 452 aa17.42■□□□□ 0.38
SNX1-213ENST00000561026 CUTAO60888 179 aa17.42■□□□□ 0.38
SNX1-213ENST00000561026 PRPF40AO75400 957 aaKnown RBP17.42■□□□□ 0.38
SNX1-213ENST00000561026 F11P03951 625 aa17.42■□□□□ 0.38
SNX1-213ENST00000561026 TMEM191BP0C7N4 346 aa17.42■□□□□ 0.38
SNX1-213ENST00000561026 ID4P47928 161 aa17.42■□□□□ 0.38
SNX1-213ENST00000561026 SOX9P48436 509 aa17.42■□□□□ 0.38
SNX1-213ENST00000561026 NLRP12P59046 1061 aa17.42■□□□□ 0.38
SNX1-213ENST00000561026 FOXK2Q01167 660 aa17.42■□□□□ 0.38
SNX1-213ENST00000561026 MYL7Q01449 175 aa17.42■□□□□ 0.38
SNX1-213ENST00000561026 INTS6LQ5JSJ4 861 aaKnown RBP17.42■□□□□ 0.38
SNX1-213ENST00000561026 RALGPS2Q86X27 583 aaPredicted RBP17.42■□□□□ 0.38
SNX1-213ENST00000561026 KIAA2013Q8IYS2 634 aa17.42■□□□□ 0.38
SNX1-213ENST00000561026 CMTM8Q8IZV2 173 aa17.42■□□□□ 0.38
SNX1-213ENST00000561026 DCLK2Q8N568 766 aa17.42■□□□□ 0.38
SNX1-213ENST00000561026 TOP6BLQ8N6T0 577 aa17.42■□□□□ 0.38
SNX1-213ENST00000561026 CELF5Q8N6W0 485 aaKnown RBP17.42■□□□□ 0.38
SNX1-213ENST00000561026 SPATA18Q8TC71 538 aa17.42■□□□□ 0.38
SNX1-213ENST00000561026 PKMYT1Q99640 499 aa17.42■□□□□ 0.38
SNX1-213ENST00000561026 SMG9Q9H0W8 520 aaKnown RBP17.42■□□□□ 0.38
SNX1-213ENST00000561026 ABCB6Q9NP58 842 aa17.42■□□□□ 0.38
SNX1-213ENST00000561026 INTS13Q9NVM9 706 aa17.42■□□□□ 0.38
SNX1-213ENST00000561026 GTSE1Q9NYZ3 720 aa17.42■□□□□ 0.38
SNX1-213ENST00000561026 SPECC1L-ADORA2AF8WAN1 911 aa17.41■□□□□ 0.38
SNX1-213ENST00000561026 EIF3DO15371 548 aaKnown RBP eCLIP17.41■□□□□ 0.38
SNX1-213ENST00000561026 TDGF1P13385 188 aa17.41■□□□□ 0.38
SNX1-213ENST00000561026 PDIA4P13667 645 aaKnown RBP17.41■□□□□ 0.38
SNX1-213ENST00000561026 ACAT1P24752 427 aaKnown RBP17.41■□□□□ 0.38
SNX1-213ENST00000561026 CTHP32929 405 aa17.41■□□□□ 0.38
SNX1-213ENST00000561026 LHX1P48742 406 aa17.41■□□□□ 0.38
SNX1-213ENST00000561026 GPR15P49685 360 aa17.41■□□□□ 0.38
SNX1-213ENST00000561026 CCR3P51677 355 aa17.41■□□□□ 0.38
SNX1-213ENST00000561026 ASIC1P78348 528 aa17.41■□□□□ 0.38
SNX1-213ENST00000561026 PLCB2Q00722 1185 aa17.41■□□□□ 0.38
SNX1-213ENST00000561026 MYO1EQ12965 1108 aa17.41■□□□□ 0.38
SNX1-213ENST00000561026 PPP2R5DQ14738 602 aa17.41■□□□□ 0.38
SNX1-213ENST00000561026 SURF1Q15526 300 aa17.41■□□□□ 0.38
SNX1-213ENST00000561026 DUOXA2Q1HG44 320 aa17.41■□□□□ 0.38
SNX1-213ENST00000561026 SOWAHAQ2M3V2 549 aa17.41■□□□□ 0.38
SNX1-213ENST00000561026 LMBRD2Q68DH5 695 aaPredicted RBP17.41■□□□□ 0.38
SNX1-213ENST00000561026 TXNDC11Q6PKC3 985 aa17.41■□□□□ 0.38
SNX1-213ENST00000561026 EPM2AIP1Q7L775 607 aaPredicted RBP17.41■□□□□ 0.38
SNX1-213ENST00000561026 CBWD2Q8IUF1 395 aa17.41■□□□□ 0.38
SNX1-213ENST00000561026 OR5B17Q8NGF7 314 aa17.41■□□□□ 0.38
SNX1-213ENST00000561026 TTC8Q8TAM2 541 aa17.41■□□□□ 0.38
SNX1-213ENST00000561026 ZNF507Q8TCN5 953 aa17.41■□□□□ 0.38
SNX1-213ENST00000561026 ANKRD36BP1Q96IX9 119 aa17.41■□□□□ 0.38
SNX1-213ENST00000561026 EPC1Q9H2F5 836 aa17.41■□□□□ 0.38
SNX1-213ENST00000561026 KIAA1586Q9HCI6 787 aa17.41■□□□□ 0.38
SNX1-213ENST00000561026 THG1LQ9NWX6 298 aaKnown RBP17.41■□□□□ 0.38
SNX1-213ENST00000561026 HSPBP1Q9NZL4 362 aa17.41■□□□□ 0.38
SNX1-213ENST00000561026 GTF3C4Q9UKN8 822 aa17.41■□□□□ 0.38
SNX1-213ENST00000561026 R3HCC1Q9Y3T6 440 aaKnown RBP17.41■□□□□ 0.38
SNX1-213ENST00000561026 PTPRJQ12913 1337 aa17.41■□□□□ 0.38
SNX1-213ENST00000561026 SOBPA7XYQ1 873 aa17.4■□□□□ 0.38
SNX1-213ENST00000561026 CSH1P0DML2 217 aa17.4■□□□□ 0.38
SNX1-213ENST00000561026 CSH2P0DML3 217 aa17.4■□□□□ 0.38
SNX1-213ENST00000561026 CYP2F1P24903 491 aa17.4■□□□□ 0.38
SNX1-213ENST00000561026 DDX6P26196 483 aaKnown RBP eCLIP17.4■□□□□ 0.38
SNX1-213ENST00000561026 PCSK1P29120 753 aa17.4■□□□□ 0.38
SNX1-213ENST00000561026 AVPR1AP37288 418 aa17.4■□□□□ 0.38
SNX1-213ENST00000561026 CXCL12P48061 93 aa17.4■□□□□ 0.38
SNX1-213ENST00000561026 NRLP54845 237 aa17.4■□□□□ 0.38
SNX1-213ENST00000561026 RPL10AP62906 217 aaKnown RBP17.4■□□□□ 0.38
SNX1-213ENST00000561026 TNK2Q07912 1038 aa17.4■□□□□ 0.38
SNX1-213ENST00000561026 LRRC32Q14392 662 aa17.4■□□□□ 0.38
SNX1-213ENST00000561026 GAS6Q14393 721 aa17.4■□□□□ 0.38
SNX1-213ENST00000561026 DDR2Q16832 855 aa17.4■□□□□ 0.38
SNX1-213ENST00000561026 SDHAF4Q5VUM1 108 aa17.4■□□□□ 0.38
SNX1-213ENST00000561026 FOXD4L5Q5VV16 416 aaPredicted RBP17.4■□□□□ 0.38
SNX1-213ENST00000561026 DPH6Q7L8W6 267 aa17.4■□□□□ 0.38
SNX1-213ENST00000561026 OSTM1Q86WC4 334 aa17.4■□□□□ 0.38
SNX1-213ENST00000561026 ADGRF2Q8IZF7 708 aa17.4■□□□□ 0.38
SNX1-213ENST00000561026 MAB21L3Q8N8X9 362 aa17.4■□□□□ 0.38
SNX1-213ENST00000561026 FOXD4L4Q8WXT5 416 aaPredicted RBP17.4■□□□□ 0.38
SNX1-213ENST00000561026 HPDLQ96IR7 371 aa17.4■□□□□ 0.38
SNX1-213ENST00000561026 C7orf25Q9BPX7 421 aa17.4■□□□□ 0.38
SNX1-213ENST00000561026 MAGED2Q9UNF1 606 aaPredicted RBP17.4■□□□□ 0.38
SNX1-213ENST00000561026 DNAH14Q0VDD8 3507 aa17.4■□□□□ 0.38
SNX1-213ENST00000561026 TGFB1I1O43294 461 aa17.4■□□□□ 0.38
SNX1-213ENST00000561026 TNNC2P02585 160 aa17.4■□□□□ 0.38
SNX1-213ENST00000561026 ZSCAN22P10073 491 aaPredicted RBP17.4■□□□□ 0.38
SNX1-213ENST00000561026 CFAP221Q4G0U5 840 aa17.4■□□□□ 0.38
SNX1-213ENST00000561026 WDR44Q5JSH3 913 aa17.4■□□□□ 0.38
SNX1-213ENST00000561026 FAM26FQ5R3K3 315 aa17.4■□□□□ 0.38
SNX1-213ENST00000561026 TXNDC8Q6A555 127 aa17.4■□□□□ 0.38
SNX1-213ENST00000561026 ERMP1Q7Z2K6 904 aa17.4■□□□□ 0.38
SNX1-213ENST00000561026 LIMS2Q7Z4I7 341 aa17.4■□□□□ 0.38
SNX1-213ENST00000561026 SPEM1Q8N4L4 309 aa17.4■□□□□ 0.38
SNX1-213ENST00000561026 STKLD1Q8NE28 680 aa17.4■□□□□ 0.38
SNX1-213ENST00000561026 MYRFLQ96LU7 910 aa17.4■□□□□ 0.38
SNX1-213ENST00000561026 MAGEF1Q9HAY2 307 aa17.4■□□□□ 0.38
SNX1-213ENST00000561026 AGPAT3Q9NRZ7 376 aa17.4■□□□□ 0.38
SNX1-213ENST00000561026 RBM12Q9NTZ6 932 aaKnown RBP17.4■□□□□ 0.38
SNX1-213ENST00000561026 NUP210Q8TEM1 1887 aaPredicted RBP17.39■□□□□ 0.37
SNX1-213ENST00000561026 POLR2DO15514 142 aaKnown RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms