RNA–Protein interactions for RNA: ENST00000560013.5

TM2D3-209, Transcript of TM2 domain containing 3, humanhuman

TSL 2

Gene TM2D3, Length 1,868 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-209ENST00000560013 UBA3Q8TBC4 463 aa24.89■■□□□ 1.57
TM2D3-209ENST00000560013 KRT35Q92764 455 aa24.89■■□□□ 1.57
TM2D3-209ENST00000560013 CPXM1Q96SM3 734 aa24.89■■□□□ 1.57
TM2D3-209ENST00000560013 CACNG4Q9UBN1 327 aa24.89■■□□□ 1.57
TM2D3-209ENST00000560013 PCDHA3Q9Y5H8 950 aa24.89■■□□□ 1.57
TM2D3-209ENST00000560013 PODXLO00592 558 aa24.88■■□□□ 1.57
TM2D3-209ENST00000560013 CYB561D2O14569 222 aa24.88■■□□□ 1.57
TM2D3-209ENST00000560013 PROSCO94903 275 aa24.88■■□□□ 1.57
TM2D3-209ENST00000560013 H2AFXP16104 143 aaPredicted RBP24.88■■□□□ 1.57
TM2D3-209ENST00000560013 HSPA6P17066 643 aa24.88■■□□□ 1.57
TM2D3-209ENST00000560013 TAP1Q03518 808 aa24.88■■□□□ 1.57
TM2D3-209ENST00000560013 SLC24A5Q71RS6 500 aa24.88■■□□□ 1.57
TM2D3-209ENST00000560013 ADGRF2Q8IZF7 708 aa24.88■■□□□ 1.57
TM2D3-209ENST00000560013 RBM12Q9NTZ6 932 aaKnown RBP24.88■■□□□ 1.57
TM2D3-209ENST00000560013 TTC7AQ9ULT0 858 aaPredicted RBP24.88■■□□□ 1.57
TM2D3-209ENST00000560013 CEP350Q5VT06 3117 aa24.88■■□□□ 1.57
TM2D3-209ENST00000560013 TMEM191CA6NGB0 347 aa24.87■■□□□ 1.57
TM2D3-209ENST00000560013 C9IYK1 514 aa24.87■■□□□ 1.57
TM2D3-209ENST00000560013 POMCP01189 267 aa24.87■■□□□ 1.57
TM2D3-209ENST00000560013 PDGFRBP09619 1106 aa24.87■■□□□ 1.57
TM2D3-209ENST00000560013 WARSP23381 471 aaKnown RBP24.87■■□□□ 1.57
TM2D3-209ENST00000560013 LMO2P25791 158 aa24.87■■□□□ 1.57
TM2D3-209ENST00000560013 PDCLQ13371 301 aa24.87■■□□□ 1.57
TM2D3-209ENST00000560013 FBXO38Q6PIJ6 1188 aa24.87■■□□□ 1.57
TM2D3-209ENST00000560013 DPEP3Q9H4B8 488 aa24.87■■□□□ 1.57
TM2D3-209ENST00000560013 SYNCQ9H7C4 482 aa24.87■■□□□ 1.57
TM2D3-209ENST00000560013 WDR35Q9P2L0 1181 aa24.87■■□□□ 1.57
TM2D3-209ENST00000560013 GJB6O95452 261 aa24.87■■□□□ 1.57
TM2D3-209ENST00000560013 EOMESO95936 686 aa24.87■■□□□ 1.57
TM2D3-209ENST00000560013 GSCP56915 257 aaPredicted RBP24.87■■□□□ 1.57
TM2D3-209ENST00000560013 RPL7AP62424 266 aaKnown RBP24.87■■□□□ 1.57
TM2D3-209ENST00000560013 GRIK3Q13003 919 aa24.87■■□□□ 1.57
TM2D3-209ENST00000560013 GOLGA7BQ2TAP0 167 aa24.87■■□□□ 1.57
TM2D3-209ENST00000560013 PPP1R15BQ5SWA1 713 aa24.87■■□□□ 1.57
TM2D3-209ENST00000560013 ARHGAP17Q68EM7 881 aa24.87■■□□□ 1.57
TM2D3-209ENST00000560013 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.87■■□□□ 1.57
TM2D3-209ENST00000560013 FTHL17Q9BXU8 183 aa24.87■■□□□ 1.57
TM2D3-209ENST00000560013 FAM49BQ9NUQ9 324 aa24.87■■□□□ 1.57
TM2D3-209ENST00000560013 IP6K2Q9UHH9 426 aa24.87■■□□□ 1.57
TM2D3-209ENST00000560013 LCMT1Q9UIC8 334 aa24.87■■□□□ 1.57
TM2D3-209ENST00000560013 TMEM59LQ9UK28 342 aa24.87■■□□□ 1.57
TM2D3-209ENST00000560013 HCRTO43612 131 aa24.86■■□□□ 1.57
TM2D3-209ENST00000560013 IGFBP6P24592 240 aaPredicted RBP24.86■■□□□ 1.57
TM2D3-209ENST00000560013 GABRB2P47870 512 aa24.86■■□□□ 1.57
TM2D3-209ENST00000560013 MARCKSL1P49006 195 aa24.86■■□□□ 1.57
TM2D3-209ENST00000560013 ZNF268Q14587 947 aaPredicted RBP24.86■■□□□ 1.57
TM2D3-209ENST00000560013 UPP1Q16831 310 aa24.86■■□□□ 1.57
TM2D3-209ENST00000560013 CCDC70Q6NSX1 233 aa24.86■■□□□ 1.57
TM2D3-209ENST00000560013 DCUN1D2Q6PH85 259 aa24.86■■□□□ 1.57
TM2D3-209ENST00000560013 SENP8Q96LD8 212 aa24.86■■□□□ 1.57
TM2D3-209ENST00000560013 RNPC3Q96LT9 517 aaKnown RBP24.86■■□□□ 1.57
TM2D3-209ENST00000560013 ARGLU1Q9NWB6 273 aaPredicted RBP24.86■■□□□ 1.57
TM2D3-209ENST00000560013 TJP2Q9UDY2 1190 aa24.86■■□□□ 1.57
TM2D3-209ENST00000560013 CASTOR2A6NHX0 329 aa24.85■■□□□ 1.57
TM2D3-209ENST00000560013 ERBB2P04626 1255 aa24.85■■□□□ 1.57
TM2D3-209ENST00000560013 PFKMP08237 780 aa24.85■■□□□ 1.57
TM2D3-209ENST00000560013 PSMC1P62191 440 aaKnown RBP24.85■■□□□ 1.57
TM2D3-209ENST00000560013 PKDCCQ504Y2 493 aa24.85■■□□□ 1.57
TM2D3-209ENST00000560013 TNIP3Q96KP6 325 aa24.85■■□□□ 1.57
TM2D3-209ENST00000560013 MCEEQ96PE7 176 aa24.85■■□□□ 1.57
TM2D3-209ENST00000560013 RNF216Q9NWF9 866 aaPredicted RBP24.85■■□□□ 1.57
TM2D3-209ENST00000560013 HESX1Q9UBX0 185 aa24.85■■□□□ 1.57
TM2D3-209ENST00000560013 INPP5FQ9Y2H2 1132 aa24.85■■□□□ 1.57
TM2D3-209ENST00000560013 INPPL1O15357 1258 aa24.85■■□□□ 1.57
TM2D3-209ENST00000560013 TUBBP07437 444 aa24.85■■□□□ 1.57
TM2D3-209ENST00000560013 FAM189BP81408 668 aa24.85■■□□□ 1.57
TM2D3-209ENST00000560013 ZNF211Q13398 564 aaPredicted RBP24.85■■□□□ 1.57
TM2D3-209ENST00000560013 CLUL1Q15846 466 aa24.85■■□□□ 1.57
TM2D3-209ENST00000560013 XYLT1Q86Y38 959 aa24.85■■□□□ 1.57
TM2D3-209ENST00000560013 LINC01599Q8WXQ3 324 aa24.85■■□□□ 1.57
TM2D3-209ENST00000560013 DDX27Q96GQ7 796 aaKnown RBP24.85■■□□□ 1.57
TM2D3-209ENST00000560013 PNKPQ96T60 521 aa24.85■■□□□ 1.57
TM2D3-209ENST00000560013 RAB21Q9UL25 225 aa24.85■■□□□ 1.57
TM2D3-209ENST00000560013 SIGLEC16A6NMB1 481 aa24.84■■□□□ 1.57
TM2D3-209ENST00000560013 PITPNM1O00562 1244 aa24.84■■□□□ 1.57
TM2D3-209ENST00000560013 FGGP02679 453 aa24.84■■□□□ 1.57
TM2D3-209ENST00000560013 MAN1A1P33908 653 aa24.84■■□□□ 1.57
TM2D3-209ENST00000560013 RWDD2BP57060 319 aa24.84■■□□□ 1.57
TM2D3-209ENST00000560013 WSCD1Q658N2 575 aa24.84■■□□□ 1.57
TM2D3-209ENST00000560013 OSTM1Q86WC4 334 aa24.84■■□□□ 1.57
TM2D3-209ENST00000560013 TTC30AQ86WT1 665 aa24.84■■□□□ 1.57
TM2D3-209ENST00000560013 C3orf58Q8NDZ4 430 aa24.84■■□□□ 1.57
TM2D3-209ENST00000560013 IPO4Q8TEX9 1081 aaKnown RBP24.84■■□□□ 1.57
TM2D3-209ENST00000560013 NAP1L3Q99457 506 aaPredicted RBP24.84■■□□□ 1.57
TM2D3-209ENST00000560013 PAAF1Q9BRP4 392 aa24.84■■□□□ 1.57
TM2D3-209ENST00000560013 MIS12Q9H081 205 aa24.84■■□□□ 1.57
TM2D3-209ENST00000560013 ST7Q9NRC1 585 aa24.84■■□□□ 1.57
TM2D3-209ENST00000560013 TARSL2A2RTX5 802 aaKnown RBP24.83■■□□□ 1.57
TM2D3-209ENST00000560013 GABRDO14764 452 aa24.83■■□□□ 1.57
TM2D3-209ENST00000560013 NBNO60934 754 aa24.83■■□□□ 1.57
TM2D3-209ENST00000560013 SETSIPP0DME0 302 aa24.83■■□□□ 1.57
TM2D3-209ENST00000560013 KRT3P12035 628 aa24.83■■□□□ 1.57
TM2D3-209ENST00000560013 TUSC3Q13454 348 aa24.83■■□□□ 1.57
TM2D3-209ENST00000560013 TMEM86AQ8N2M4 240 aa24.83■■□□□ 1.57
TM2D3-209ENST00000560013 LPIN3Q9BQK8 851 aa24.83■■□□□ 1.57
TM2D3-209ENST00000560013 LRRC1Q9BTT6 524 aa24.83■■□□□ 1.57
TM2D3-209ENST00000560013 SBDSQ9Y3A5 250 aaKnown RBP eCLIP24.83■■□□□ 1.57
TM2D3-209ENST00000560013 GOLGA8SH3BPF8 625 aa24.83■■□□□ 1.56
TM2D3-209ENST00000560013 PQBP1O60828 265 aaKnown RBP24.83■■□□□ 1.56
TM2D3-209ENST00000560013 DSTYKQ6XUX3 929 aa24.83■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms