RNA–Protein interactions for RNA: ENST00000559734.1

TRAF3-207, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-207ENST00000559734 LPCAT2Q7L5N7 544 aa11.67□□□□□ -0.54
TRAF3-207ENST00000559734 TMEM150AQ86TG1 271 aa11.67□□□□□ -0.54
TRAF3-207ENST00000559734 METTL23Q86XA0 190 aa11.67□□□□□ -0.54
TRAF3-207ENST00000559734 CCDC33Q8N5R6 958 aa11.67□□□□□ -0.54
TRAF3-207ENST00000559734 NSUN7Q8NE18 718 aaKnown RBP11.67□□□□□ -0.54
TRAF3-207ENST00000559734 MDGA1Q8NFP4 955 aa11.67□□□□□ -0.54
TRAF3-207ENST00000559734 RLN3Q8WXF3 142 aa11.67□□□□□ -0.54
TRAF3-207ENST00000559734 GTPBP2Q9BX10 602 aaKnown RBP11.67□□□□□ -0.54
TRAF3-207ENST00000559734 ZCWPW1Q9H0M4 648 aa11.67□□□□□ -0.54
TRAF3-207ENST00000559734 RPF1Q9H9Y2 349 aaKnown RBP11.67□□□□□ -0.54
TRAF3-207ENST00000559734 FSCN3Q9NQT6 498 aa11.67□□□□□ -0.54
TRAF3-207ENST00000559734 HSFX1Q9UBD0 423 aa11.67□□□□□ -0.54
TRAF3-207ENST00000559734 DNM3Q9UQ16 869 aa11.67□□□□□ -0.54
TRAF3-207ENST00000559734 ASPMQ8IZT6 3477 aa11.66□□□□□ -0.54
TRAF3-207ENST00000559734 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.66□□□□□ -0.54
TRAF3-207ENST00000559734 TULP1O00294 542 aaPredicted RBP11.66□□□□□ -0.54
TRAF3-207ENST00000559734 F11P03951 625 aa11.66□□□□□ -0.54
TRAF3-207ENST00000559734 HAPLN1P10915 354 aaPredicted RBP11.66□□□□□ -0.54
TRAF3-207ENST00000559734 GPR15P49685 360 aa11.66□□□□□ -0.54
TRAF3-207ENST00000559734 LILRA4P59901 499 aa11.66□□□□□ -0.54
TRAF3-207ENST00000559734 ZBTB6Q15916 424 aa11.66□□□□□ -0.54
TRAF3-207ENST00000559734 RINT1Q6NUQ1 792 aa11.66□□□□□ -0.54
TRAF3-207ENST00000559734 ZPBP2Q6X784 338 aa11.66□□□□□ -0.54
TRAF3-207ENST00000559734 TMEFF1Q8IYR6 380 aa11.66□□□□□ -0.54
TRAF3-207ENST00000559734 THEM5Q8N1Q8 247 aa11.66□□□□□ -0.54
TRAF3-207ENST00000559734 HDDC3Q8N4P3 179 aa11.66□□□□□ -0.54
TRAF3-207ENST00000559734 CHCHD4Q8N4Q1 142 aa11.66□□□□□ -0.54
TRAF3-207ENST00000559734 SPPL2BQ8TCT7 592 aa11.66□□□□□ -0.54
TRAF3-207ENST00000559734 OSCP1Q8WVF1 389 aa11.66□□□□□ -0.54
TRAF3-207ENST00000559734 ATP2A3Q93084 1043 aa11.66□□□□□ -0.54
TRAF3-207ENST00000559734 GTF3C6Q969F1 213 aa11.66□□□□□ -0.54
TRAF3-207ENST00000559734 COL26A1Q96A83 441 aa11.66□□□□□ -0.54
TRAF3-207ENST00000559734 SPACA7Q96KW9 195 aa11.66□□□□□ -0.54
TRAF3-207ENST00000559734 CNOT6LQ96LI5 555 aaKnown RBP11.66□□□□□ -0.54
TRAF3-207ENST00000559734 PYM1Q9BRP8 204 aaKnown RBP11.66□□□□□ -0.54
TRAF3-207ENST00000559734 HAPLN2Q9GZV7 340 aa11.66□□□□□ -0.54
TRAF3-207ENST00000559734 BCCIPQ9P287 314 aaKnown RBP eCLIP11.66□□□□□ -0.54
TRAF3-207ENST00000559734 EVLQ9UI08 416 aaPredicted RBP11.66□□□□□ -0.54
TRAF3-207ENST00000559734 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.66□□□□□ -0.54
TRAF3-207ENST00000559734 ANTXRLA6NF34 631 aa11.65□□□□□ -0.54
TRAF3-207ENST00000559734 PP2D1A8MPX8 630 aa11.65□□□□□ -0.54
TRAF3-207ENST00000559734 CYB561D2O14569 222 aa11.65□□□□□ -0.54
TRAF3-207ENST00000559734 PRPF40AO75400 957 aaKnown RBP11.65□□□□□ -0.54
TRAF3-207ENST00000559734 ALDH1A2O94788 518 aa11.65□□□□□ -0.54
TRAF3-207ENST00000559734 CKMP06732 381 aa11.65□□□□□ -0.54
TRAF3-207ENST00000559734 NFICP08651 508 aa11.65□□□□□ -0.54
TRAF3-207ENST00000559734 MAPTP10636 758 aaKnown RBP11.65□□□□□ -0.54
TRAF3-207ENST00000559734 PLS3P13797 630 aa11.65□□□□□ -0.54
TRAF3-207ENST00000559734 PTGER3P43115 390 aa11.65□□□□□ -0.54
TRAF3-207ENST00000559734 LIG4P49917 911 aa11.65□□□□□ -0.54
TRAF3-207ENST00000559734 FXR2P51116 673 aaKnown RBP eCLIP11.65□□□□□ -0.54
TRAF3-207ENST00000559734 SMTNP53814 917 aa11.65□□□□□ -0.54
TRAF3-207ENST00000559734 FAM160A1Q05DH4 1040 aa11.65□□□□□ -0.54
TRAF3-207ENST00000559734 NR1H3Q13133 447 aa11.65□□□□□ -0.54
TRAF3-207ENST00000559734 GNL2Q13823 731 aaKnown RBP11.65□□□□□ -0.54
TRAF3-207ENST00000559734 NBR1Q14596 966 aa11.65□□□□□ -0.54
TRAF3-207ENST00000559734 ANKRD1Q15327 319 aa11.65□□□□□ -0.54
TRAF3-207ENST00000559734 ENOX2Q16206 610 aaKnown RBP11.65□□□□□ -0.54
TRAF3-207ENST00000559734 ME3Q16798 604 aa11.65□□□□□ -0.54
TRAF3-207ENST00000559734 COL28A1Q2UY09 1125 aa11.65□□□□□ -0.54
TRAF3-207ENST00000559734 SPATA1Q5VX52 437 aa11.65□□□□□ -0.54
TRAF3-207ENST00000559734 C9orf57Q5W0N0 161 aa11.65□□□□□ -0.54
TRAF3-207ENST00000559734 JADE1Q6IE81 842 aa11.65□□□□□ -0.54
TRAF3-207ENST00000559734 PDZD3Q86UT5 571 aa11.65□□□□□ -0.54
TRAF3-207ENST00000559734 LRRTM3Q86VH5 581 aa11.65□□□□□ -0.54
TRAF3-207ENST00000559734 MON1AQ86VX9 555 aa11.65□□□□□ -0.54
TRAF3-207ENST00000559734 RASSF3Q86WH2 238 aa11.65□□□□□ -0.54
TRAF3-207ENST00000559734 PROSER1Q86XN7 944 aa11.65□□□□□ -0.54
TRAF3-207ENST00000559734 TMEM161BQ8NDZ6 487 aa11.65□□□□□ -0.54
TRAF3-207ENST00000559734 CCDC26Q8TAB7 109 aa11.65□□□□□ -0.54
TRAF3-207ENST00000559734 USP33Q8TEY7 942 aa11.65□□□□□ -0.54
TRAF3-207ENST00000559734 C2orf15Q8WU43 125 aaKnown RBP11.65□□□□□ -0.54
TRAF3-207ENST00000559734 PI4K2AQ9BTU6 479 aa11.65□□□□□ -0.54
TRAF3-207ENST00000559734 C17orf75Q9HAS0 396 aa11.65□□□□□ -0.54
TRAF3-207ENST00000559734 DSEQ9UL01 958 aa11.65□□□□□ -0.54
TRAF3-207ENST00000559734 FASNP49327 2511 aaKnown RBP11.65□□□□□ -0.54
TRAF3-207ENST00000559734 NUP205Q92621 2012 aa11.64□□□□□ -0.55
TRAF3-207ENST00000559734 TRAV19A0A0A6YYK7 116 aa11.64□□□□□ -0.55
TRAF3-207ENST00000559734 EIF4E1BA6NMX2 242 aaKnown RBP11.64□□□□□ -0.55
TRAF3-207ENST00000559734 HNRNPDLO14979 420 aaKnown RBP11.64□□□□□ -0.55
TRAF3-207ENST00000559734 EPB41L2O43491 1005 aaKnown RBP11.64□□□□□ -0.55
TRAF3-207ENST00000559734 CSH1P0DML2 217 aa11.64□□□□□ -0.55
TRAF3-207ENST00000559734 CSH2P0DML3 217 aa11.64□□□□□ -0.55
TRAF3-207ENST00000559734 HMGA1P17096 107 aaKnown RBP11.64□□□□□ -0.55
TRAF3-207ENST00000559734 CDC25AP30304 524 aa11.64□□□□□ -0.55
TRAF3-207ENST00000559734 ORC2Q13416 577 aaPredicted RBP11.64□□□□□ -0.55
TRAF3-207ENST00000559734 ZNF268Q14587 947 aaPredicted RBP11.64□□□□□ -0.55
TRAF3-207ENST00000559734 TMEM132DQ14C87 1099 aa11.64□□□□□ -0.55
TRAF3-207ENST00000559734 ZNF77Q15935 545 aa11.64□□□□□ -0.55
TRAF3-207ENST00000559734 EML3Q32P44 896 aa11.64□□□□□ -0.55
TRAF3-207ENST00000559734 SOWAHCQ53LP3 525 aaPredicted RBP11.64□□□□□ -0.55
TRAF3-207ENST00000559734 LYSMD4Q5XG99 296 aa11.64□□□□□ -0.55
TRAF3-207ENST00000559734 KRT79Q5XKE5 535 aa11.64□□□□□ -0.55
TRAF3-207ENST00000559734 WSCD1Q658N2 575 aa11.64□□□□□ -0.55
TRAF3-207ENST00000559734 LMBRD2Q68DH5 695 aaPredicted RBP11.64□□□□□ -0.55
TRAF3-207ENST00000559734 C1orf186Q6ZWK4 172 aa11.64□□□□□ -0.55
TRAF3-207ENST00000559734 KCNK18Q7Z418 384 aa11.64□□□□□ -0.55
TRAF3-207ENST00000559734 SYT12Q8IV01 421 aa11.64□□□□□ -0.55
TRAF3-207ENST00000559734 EFCAB13Q8IY85 973 aa11.64□□□□□ -0.55
TRAF3-207ENST00000559734 DCP1BQ8IZD4 617 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms