RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 SLC35G2Q8TBE7 412 aa18.39■□□□□ 0.53
CHRNA3-206ENST00000559658 CTNNBL1Q8WYA6 563 aaPredicted RBP18.39■□□□□ 0.53
CHRNA3-206ENST00000559658 TOP1MTQ969P6 601 aa18.39■□□□□ 0.53
CHRNA3-206ENST00000559658 LUC7LQ9NQ29 371 aaKnown RBP18.39■□□□□ 0.53
CHRNA3-206ENST00000559658 CXXC1Q9P0U4 656 aaPredicted RBP18.39■□□□□ 0.53
CHRNA3-206ENST00000559658 INTUQ9ULD6 942 aa18.39■□□□□ 0.53
CHRNA3-206ENST00000559658 ATP8B3O60423 1300 aa18.39■□□□□ 0.53
CHRNA3-206ENST00000559658 LAMA3Q16787 3333 aa18.38■□□□□ 0.53
CHRNA3-206ENST00000559658 GRID2IPA4D2P6 1211 aa18.38■□□□□ 0.53
CHRNA3-206ENST00000559658 PIK3R2O00459 728 aa18.38■□□□□ 0.53
CHRNA3-206ENST00000559658 CLDN5O00501 218 aa18.38■□□□□ 0.53
CHRNA3-206ENST00000559658 CAPN2P17655 700 aa18.38■□□□□ 0.53
CHRNA3-206ENST00000559658 CDH5P33151 784 aaPredicted RBP18.38■□□□□ 0.53
CHRNA3-206ENST00000559658 COL13A1Q5TAT6 717 aaPredicted RBP18.38■□□□□ 0.53
CHRNA3-206ENST00000559658 CYP4A22Q5TCH4 519 aa18.38■□□□□ 0.53
CHRNA3-206ENST00000559658 TRIM72Q6ZMU5 477 aa18.38■□□□□ 0.53
CHRNA3-206ENST00000559658 ZNF365Q70YC5 407 aa18.38■□□□□ 0.53
CHRNA3-206ENST00000559658 NLRC5Q86WI3 1866 aa18.38■□□□□ 0.53
CHRNA3-206ENST00000559658 CPNE8Q86YQ8 564 aa18.38■□□□□ 0.53
CHRNA3-206ENST00000559658 LRRC43Q8N309 656 aa18.38■□□□□ 0.53
CHRNA3-206ENST00000559658 B3GALNT2Q8NCR0 500 aa18.38■□□□□ 0.53
CHRNA3-206ENST00000559658 OR10T2Q8NGX3 314 aa18.38■□□□□ 0.53
CHRNA3-206ENST00000559658 BTBD6Q96KE9 485 aa18.38■□□□□ 0.53
CHRNA3-206ENST00000559658 SUSD3Q96L08 255 aa18.38■□□□□ 0.53
CHRNA3-206ENST00000559658 CPXM1Q96SM3 734 aa18.38■□□□□ 0.53
CHRNA3-206ENST00000559658 TRIM7Q9C029 511 aa18.38■□□□□ 0.53
CHRNA3-206ENST00000559658 FAM124BQ9H5Z6 455 aaPredicted RBP18.38■□□□□ 0.53
CHRNA3-206ENST00000559658 CWH43Q9H720 699 aa18.38■□□□□ 0.53
CHRNA3-206ENST00000559658 PALMO75781 387 aa18.37■□□□□ 0.53
CHRNA3-206ENST00000559658 ODC1P11926 461 aa18.37■□□□□ 0.53
CHRNA3-206ENST00000559658 GPD2P43304 727 aa18.37■□□□□ 0.53
CHRNA3-206ENST00000559658 RABGGTBP53611 331 aa18.37■□□□□ 0.53
CHRNA3-206ENST00000559658 NAP1L1P55209 391 aaKnown RBP18.37■□□□□ 0.53
CHRNA3-206ENST00000559658 CNGA2Q16280 664 aa18.37■□□□□ 0.53
CHRNA3-206ENST00000559658 LCLAT1Q6UWP7 414 aa18.37■□□□□ 0.53
CHRNA3-206ENST00000559658 CRYBG2Q8N1P7 616 aa18.37■□□□□ 0.53
CHRNA3-206ENST00000559658 TTC39CQ8N584 583 aa18.37■□□□□ 0.53
CHRNA3-206ENST00000559658 SLC2A14Q8TDB8 520 aa18.37■□□□□ 0.53
CHRNA3-206ENST00000559658 RFFLQ8WZ73 363 aa18.37■□□□□ 0.53
CHRNA3-206ENST00000559658 RHOBTB2Q9BYZ6 727 aa18.37■□□□□ 0.53
CHRNA3-206ENST00000559658 GPR62Q9BZJ7 368 aa18.37■□□□□ 0.53
CHRNA3-206ENST00000559658 CNOT8Q9UFF9 292 aaKnown RBP18.37■□□□□ 0.53
CHRNA3-206ENST00000559658 MYBPHLA2RUH7 354 aa18.37■□□□□ 0.53
CHRNA3-206ENST00000559658 BTNL10A8MVZ5 291 aa18.37■□□□□ 0.53
CHRNA3-206ENST00000559658 TMEM189-UBE2V1I3L0A0 370 aa18.37■□□□□ 0.53
CHRNA3-206ENST00000559658 HOXA2O43364 376 aa18.37■□□□□ 0.53
CHRNA3-206ENST00000559658 MED7O43513 233 aa18.37■□□□□ 0.53
CHRNA3-206ENST00000559658 NCK2O43639 380 aa18.37■□□□□ 0.53
CHRNA3-206ENST00000559658 LSM8O95777 96 aaKnown RBP18.37■□□□□ 0.53
CHRNA3-206ENST00000559658 GALTP07902 379 aa18.37■□□□□ 0.53
CHRNA3-206ENST00000559658 MMP8P22894 467 aa18.37■□□□□ 0.53
CHRNA3-206ENST00000559658 NOP2P46087 812 aaKnown RBP18.37■□□□□ 0.53
CHRNA3-206ENST00000559658 PKDCCQ504Y2 493 aa18.37■□□□□ 0.53
CHRNA3-206ENST00000559658 MDH1BQ5I0G3 518 aa18.37■□□□□ 0.53
CHRNA3-206ENST00000559658 PHF13Q86YI8 300 aaPredicted RBP18.37■□□□□ 0.53
CHRNA3-206ENST00000559658 SYT15Q9BQS2 421 aa18.37■□□□□ 0.53
CHRNA3-206ENST00000559658 ADAM22Q9P0K1 906 aa18.37■□□□□ 0.53
CHRNA3-206ENST00000559658 HYOU1Q9Y4L1 999 aa18.37■□□□□ 0.53
CHRNA3-206ENST00000559658 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.37■□□□□ 0.53
CHRNA3-206ENST00000559658 ZBBXA8MT70 800 aa18.36■□□□□ 0.53
CHRNA3-206ENST00000559658 FTCDO95954 541 aa18.36■□□□□ 0.53
CHRNA3-206ENST00000559658 AMHP03971 560 aa18.36■□□□□ 0.53
CHRNA3-206ENST00000559658 ATP1A1P05023 1023 aaKnown RBP18.36■□□□□ 0.53
CHRNA3-206ENST00000559658 CYP11A1P05108 521 aa18.36■□□□□ 0.53
CHRNA3-206ENST00000559658 CYP1A2P05177 515 aa18.36■□□□□ 0.53
CHRNA3-206ENST00000559658 GPC5P78333 572 aa18.36■□□□□ 0.53
CHRNA3-206ENST00000559658 FPGSQ05932 587 aa18.36■□□□□ 0.53
CHRNA3-206ENST00000559658 PAQR9Q6ZVX9 377 aa18.36■□□□□ 0.53
CHRNA3-206ENST00000559658 FUKQ8N0W3 1084 aa18.36■□□□□ 0.53
CHRNA3-206ENST00000559658 TMEM86AQ8N2M4 240 aa18.36■□□□□ 0.53
CHRNA3-206ENST00000559658 TMEM35BQ8NCS4 154 aa18.36■□□□□ 0.53
CHRNA3-206ENST00000559658 TPCN2Q8NHX9 752 aa18.36■□□□□ 0.53
CHRNA3-206ENST00000559658 ZNF689Q96CS4 500 aaPredicted RBP18.36■□□□□ 0.53
CHRNA3-206ENST00000559658 NOX5Q96PH1 765 aa18.36■□□□□ 0.53
CHRNA3-206ENST00000559658 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.36■□□□□ 0.53
CHRNA3-206ENST00000559658 NUP85Q9BW27 656 aa18.36■□□□□ 0.53
CHRNA3-206ENST00000559658 MRPL9Q9BYD2 267 aaKnown RBP18.36■□□□□ 0.53
CHRNA3-206ENST00000559658 LHX5Q9H2C1 402 aa18.36■□□□□ 0.53
CHRNA3-206ENST00000559658 TMEM30AQ9NV96 361 aa18.36■□□□□ 0.53
CHRNA3-206ENST00000559658 TMLHEQ9NVH6 421 aa18.36■□□□□ 0.53
CHRNA3-206ENST00000559658 PRKAG2Q9UGJ0 569 aa18.36■□□□□ 0.53
CHRNA3-206ENST00000559658 GTF3C4Q9UKN8 822 aa18.36■□□□□ 0.53
CHRNA3-206ENST00000559658 ADAM28Q9UKQ2 775 aa18.36■□□□□ 0.53
CHRNA3-206ENST00000559658 PACSIN2Q9UNF0 486 aaPredicted RBP18.36■□□□□ 0.53
CHRNA3-206ENST00000559658 PCDHGC5Q9Y5F6 944 aa18.36■□□□□ 0.53
CHRNA3-206ENST00000559658 PTPRDP23468 1912 aa18.35■□□□□ 0.53
CHRNA3-206ENST00000559658 GABBR2O75899 941 aa18.35■□□□□ 0.53
CHRNA3-206ENST00000559658 ERBB2P04626 1255 aa18.35■□□□□ 0.53
CHRNA3-206ENST00000559658 OR4Q2P0C623 313 aa18.35■□□□□ 0.53
CHRNA3-206ENST00000559658 PTPN1P18031 435 aaKnown RBP18.35■□□□□ 0.53
CHRNA3-206ENST00000559658 RGS7P49802 495 aa18.35■□□□□ 0.53
CHRNA3-206ENST00000559658 CACNA2D1P54289 1103 aa18.35■□□□□ 0.53
CHRNA3-206ENST00000559658 PDCLQ13371 301 aa18.35■□□□□ 0.53
CHRNA3-206ENST00000559658 LRRC57Q8N9N7 239 aa18.35■□□□□ 0.53
CHRNA3-206ENST00000559658 VN1R3Q9BXE9 311 aa18.35■□□□□ 0.53
CHRNA3-206ENST00000559658 CTTNBP2NLQ9P2B4 639 aa18.35■□□□□ 0.53
CHRNA3-206ENST00000559658 A0A0A6YYK5 440 aaPredicted RBP18.35■□□□□ 0.53
CHRNA3-206ENST00000559658 BUB1BO60566 1050 aaPredicted RBP18.35■□□□□ 0.53
CHRNA3-206ENST00000559658 TADA2AO75478 443 aa18.35■□□□□ 0.53
CHRNA3-206ENST00000559658 BEST1O76090 585 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 196.8 ms