RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 PHGDHO43175 533 aaKnown RBP4.64□□□□□ -1.67
VPS13C-207ENST00000558919 CHRM2P08172 466 aa4.64□□□□□ -1.67
VPS13C-207ENST00000558919 ARFIP2P53365 341 aa4.64□□□□□ -1.67
VPS13C-207ENST00000558919 ELLP55199 621 aaPredicted RBP4.64□□□□□ -1.67
VPS13C-207ENST00000558919 ZNF362Q5T0B9 420 aaPredicted RBP4.64□□□□□ -1.67
VPS13C-207ENST00000558919 LAYNQ6UX15 382 aa4.64□□□□□ -1.67
VPS13C-207ENST00000558919 TMEM108Q6UXF1 575 aa4.64□□□□□ -1.67
VPS13C-207ENST00000558919 MAEAQ7L5Y9 396 aa4.64□□□□□ -1.67
VPS13C-207ENST00000558919 GRASPQ7Z6J2 395 aaPredicted RBP4.64□□□□□ -1.67
VPS13C-207ENST00000558919 PEG10Q86TG7 708 aaKnown RBP4.64□□□□□ -1.67
VPS13C-207ENST00000558919 ADGRG3Q86Y34 549 aa4.64□□□□□ -1.67
VPS13C-207ENST00000558919 KIAA0319LQ8IZA0 1049 aa4.64□□□□□ -1.67
VPS13C-207ENST00000558919 MYO1HQ8N1T3 1032 aa4.64□□□□□ -1.67
VPS13C-207ENST00000558919 FAM98AQ8NCA5 519 aaKnown RBP4.64□□□□□ -1.67
VPS13C-207ENST00000558919 NELL1Q92832 810 aa4.64□□□□□ -1.67
VPS13C-207ENST00000558919 PBKQ96KB5 322 aa4.64□□□□□ -1.67
VPS13C-207ENST00000558919 ACTRT3Q9BYD9 372 aa4.64□□□□□ -1.67
VPS13C-207ENST00000558919 B3GNT5Q9BYG0 378 aa4.64□□□□□ -1.67
VPS13C-207ENST00000558919 TRIM54Q9BYV2 358 aa4.64□□□□□ -1.67
VPS13C-207ENST00000558919 TTYH3Q9C0H2 523 aa4.64□□□□□ -1.67
VPS13C-207ENST00000558919 PRDM13Q9H4Q3 707 aa4.64□□□□□ -1.67
VPS13C-207ENST00000558919 ZMAT3Q9HA38 289 aaKnown RBP4.64□□□□□ -1.67
VPS13C-207ENST00000558919 KIAA1586Q9HCI6 787 aa4.64□□□□□ -1.67
VPS13C-207ENST00000558919 SEMA4GQ9NTN9 838 aa4.64□□□□□ -1.67
VPS13C-207ENST00000558919 XPR1Q9UBH6 696 aa4.64□□□□□ -1.67
VPS13C-207ENST00000558919 COX11Q9Y6N1 276 aa4.64□□□□□ -1.67
VPS13C-207ENST00000558919 KAT6AQ92794 2004 aa4.63□□□□□ -1.67
VPS13C-207ENST00000558919 GOLGA6CA6NDK9 693 aa4.63□□□□□ -1.67
VPS13C-207ENST00000558919 GOLGA6BA6NDN3 693 aa4.63□□□□□ -1.67
VPS13C-207ENST00000558919 CAPN8A6NHC0 703 aa4.63□□□□□ -1.67
VPS13C-207ENST00000558919 MGST3O14880 152 aa4.63□□□□□ -1.67
VPS13C-207ENST00000558919 MARCH6O60337 910 aa4.63□□□□□ -1.67
VPS13C-207ENST00000558919 GOLGA6DP0CG33 693 aa4.63□□□□□ -1.67
VPS13C-207ENST00000558919 CYP2C9P11712 490 aa4.63□□□□□ -1.67
VPS13C-207ENST00000558919 XRCC6P12956 609 aaKnown RBP eCLIP4.63□□□□□ -1.67
VPS13C-207ENST00000558919 NPR1P16066 1061 aa4.63□□□□□ -1.67
VPS13C-207ENST00000558919 ZNF134P52741 427 aa4.63□□□□□ -1.67
VPS13C-207ENST00000558919 WNT3P56703 355 aa4.63□□□□□ -1.67
VPS13C-207ENST00000558919 ARHGAP29Q52LW3 1261 aa4.63□□□□□ -1.67
VPS13C-207ENST00000558919 TEDDM1Q5T9Z0 273 aa4.63□□□□□ -1.67
VPS13C-207ENST00000558919 ICE2Q659A1 982 aa4.63□□□□□ -1.67
VPS13C-207ENST00000558919 FBXO42Q6P3S6 717 aa4.63□□□□□ -1.67
VPS13C-207ENST00000558919 UROC1Q96N76 676 aa4.63□□□□□ -1.67
VPS13C-207ENST00000558919 NT5C1BQ96P26 610 aa4.63□□□□□ -1.67
VPS13C-207ENST00000558919 BBC3Q96PG8 261 aaPredicted RBP4.63□□□□□ -1.67
VPS13C-207ENST00000558919 P2RX7Q99572 595 aaKnown RBP4.63□□□□□ -1.67
VPS13C-207ENST00000558919 TIMP4Q99727 224 aa4.63□□□□□ -1.67
VPS13C-207ENST00000558919 PTDSS2Q9BVG9 487 aa4.63□□□□□ -1.67
VPS13C-207ENST00000558919 DPH1Q9BZG8 443 aa4.63□□□□□ -1.67
VPS13C-207ENST00000558919 ATP6V0A4Q9HBG4 840 aa4.63□□□□□ -1.67
VPS13C-207ENST00000558919 METTL14Q9HCE5 456 aaKnown RBP4.63□□□□□ -1.67
VPS13C-207ENST00000558919 GOLGA6AQ9NYA3 693 aa4.63□□□□□ -1.67
VPS13C-207ENST00000558919 EHD3Q9NZN3 535 aa4.63□□□□□ -1.67
VPS13C-207ENST00000558919 L1RE1Q9UN81 338 aa4.63□□□□□ -1.67
VPS13C-207ENST00000558919 TMX2Q9Y320 296 aa4.63□□□□□ -1.67
VPS13C-207ENST00000558919 ENTPD2Q9Y5L3 495 aa4.63□□□□□ -1.67
VPS13C-207ENST00000558919 VWC2LB2RUY7 222 aa4.62□□□□□ -1.67
VPS13C-207ENST00000558919 MYO1CO00159 1063 aa4.62□□□□□ -1.67
VPS13C-207ENST00000558919 MYBP10242 640 aa4.62□□□□□ -1.67
VPS13C-207ENST00000558919 PPIFP30405 207 aaKnown RBP4.62□□□□□ -1.67
VPS13C-207ENST00000558919 PXNP49023 591 aaPredicted RBP4.62□□□□□ -1.67
VPS13C-207ENST00000558919 SLC11A2P49281 568 aa4.62□□□□□ -1.67
VPS13C-207ENST00000558919 UCP3P55916 312 aa4.62□□□□□ -1.67
VPS13C-207ENST00000558919 SOX10P56693 466 aa4.62□□□□□ -1.67
VPS13C-207ENST00000558919 SATB1Q01826 763 aa4.62□□□□□ -1.67
VPS13C-207ENST00000558919 BMPR2Q13873 1038 aa4.62□□□□□ -1.67
VPS13C-207ENST00000558919 GFOD2Q3B7J2 385 aa4.62□□□□□ -1.67
VPS13C-207ENST00000558919 VPS53Q5VIR6 699 aa4.62□□□□□ -1.67
VPS13C-207ENST00000558919 LMBRD2Q68DH5 695 aaPredicted RBP4.62□□□□□ -1.67
VPS13C-207ENST00000558919 ZNF783Q6ZMS7 281 aa4.62□□□□□ -1.67
VPS13C-207ENST00000558919 RD3Q7Z3Z2 195 aa4.62□□□□□ -1.67
VPS13C-207ENST00000558919 DTX2Q86UW9 622 aa4.62□□□□□ -1.67
VPS13C-207ENST00000558919 BOLLQ8N9W6 283 aaKnown RBP4.62□□□□□ -1.67
VPS13C-207ENST00000558919 OR6B3Q8NGW1 331 aa4.62□□□□□ -1.67
VPS13C-207ENST00000558919 IL31RAQ8NI17 732 aa4.62□□□□□ -1.67
VPS13C-207ENST00000558919 ANKS1AQ92625 1134 aa4.62□□□□□ -1.67
VPS13C-207ENST00000558919 RFKQ969G6 155 aa4.62□□□□□ -1.67
VPS13C-207ENST00000558919 FKBP10Q96AY3 582 aa4.62□□□□□ -1.67
VPS13C-207ENST00000558919 SUCLG2Q96I99 432 aa4.62□□□□□ -1.67
VPS13C-207ENST00000558919 R3HDMLQ9H3Y0 253 aa4.62□□□□□ -1.67
VPS13C-207ENST00000558919 FAM204AQ9H8W3 233 aa4.62□□□□□ -1.67
VPS13C-207ENST00000558919 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.62□□□□□ -1.67
VPS13C-207ENST00000558919 SHOC2Q9UQ13 582 aa4.62□□□□□ -1.67
VPS13C-207ENST00000558919 PAXBP1Q9Y5B6 917 aa4.62□□□□□ -1.67
VPS13C-207ENST00000558919 A0A087WWL8 130 aa4.61□□□□□ -1.67
VPS13C-207ENST00000558919 GCOM1H8Y6P7 765 aaPredicted RBP4.61□□□□□ -1.67
VPS13C-207ENST00000558919 BTN3A1O00481 513 aa4.61□□□□□ -1.67
VPS13C-207ENST00000558919 FRS3O43559 492 aa4.61□□□□□ -1.67
VPS13C-207ENST00000558919 TBC1D4O60343 1298 aa4.61□□□□□ -1.67
VPS13C-207ENST00000558919 PROP1O75360 226 aa4.61□□□□□ -1.67
VPS13C-207ENST00000558919 URI1O94763 535 aaPredicted RBP4.61□□□□□ -1.67
VPS13C-207ENST00000558919 NXPH3O95157 252 aa4.61□□□□□ -1.67
VPS13C-207ENST00000558919 IGLV2-14P01704 120 aa4.61□□□□□ -1.67
VPS13C-207ENST00000558919 RHOP08100 348 aa4.61□□□□□ -1.67
VPS13C-207ENST00000558919 ELFN1P0C7U0 828 aa4.61□□□□□ -1.67
VPS13C-207ENST00000558919 KITP10721 976 aa4.61□□□□□ -1.67
VPS13C-207ENST00000558919 WT1P19544 449 aaPredicted RBP4.61□□□□□ -1.67
VPS13C-207ENST00000558919 EN2P19622 333 aaPredicted RBP4.61□□□□□ -1.67
VPS13C-207ENST00000558919 LRPAP1P30533 357 aa4.61□□□□□ -1.67
VPS13C-207ENST00000558919 PTH2RP49190 550 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms