RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 FAM227AF5H4B4 570 aa4.23□□□□□ -1.73
SPG11-206ENST00000558093 ERC2O15083 957 aa4.23□□□□□ -1.73
SPG11-206ENST00000558093 PHGDHO43175 533 aaKnown RBP4.23□□□□□ -1.73
SPG11-206ENST00000558093 NXPH3O95157 252 aa4.23□□□□□ -1.73
SPG11-206ENST00000558093 TTLL1O95922 423 aa4.23□□□□□ -1.73
SPG11-206ENST00000558093 EBLN1P0CF75 366 aa4.23□□□□□ -1.73
SPG11-206ENST00000558093 NR2F6P10588 404 aa4.23□□□□□ -1.73
SPG11-206ENST00000558093 KITP10721 976 aa4.23□□□□□ -1.73
SPG11-206ENST00000558093 PTH2RP49190 550 aa4.23□□□□□ -1.73
SPG11-206ENST00000558093 CLK3P49761 638 aaKnown RBP4.23□□□□□ -1.73
SPG11-206ENST00000558093 HNRNPMP52272 730 aaKnown RBP eCLIP4.23□□□□□ -1.73
SPG11-206ENST00000558093 CACNA2D1P54289 1103 aa4.23□□□□□ -1.73
SPG11-206ENST00000558093 ELLP55199 621 aaPredicted RBP4.23□□□□□ -1.73
SPG11-206ENST00000558093 LILRA4P59901 499 aa4.23□□□□□ -1.73
SPG11-206ENST00000558093 GPSM2P81274 684 aa4.23□□□□□ -1.73
SPG11-206ENST00000558093 KRT17Q04695 432 aa4.23□□□□□ -1.73
SPG11-206ENST00000558093 TSTD2Q5T7W7 516 aa4.23□□□□□ -1.73
SPG11-206ENST00000558093 VPS53Q5VIR6 699 aa4.23□□□□□ -1.73
SPG11-206ENST00000558093 LMBRD2Q68DH5 695 aaPredicted RBP4.23□□□□□ -1.73
SPG11-206ENST00000558093 SFRP4Q6FHJ7 346 aaPredicted RBP4.23□□□□□ -1.73
SPG11-206ENST00000558093 FBXO42Q6P3S6 717 aa4.23□□□□□ -1.73
SPG11-206ENST00000558093 NPNTQ6UXI9 565 aa4.23□□□□□ -1.73
SPG11-206ENST00000558093 OVCH2Q7RTZ1 564 aa4.23□□□□□ -1.73
SPG11-206ENST00000558093 MPP5Q8N3R9 675 aa4.23□□□□□ -1.73
SPG11-206ENST00000558093 MAGEB6Q8N7X4 407 aa4.23□□□□□ -1.73
SPG11-206ENST00000558093 OR6B3Q8NGW1 331 aa4.23□□□□□ -1.73
SPG11-206ENST00000558093 ATRIPQ8WXE1 791 aa4.23□□□□□ -1.73
SPG11-206ENST00000558093 NELL2Q99435 816 aa4.23□□□□□ -1.73
SPG11-206ENST00000558093 LRFN3Q9BTN0 628 aa4.23□□□□□ -1.73
SPG11-206ENST00000558093 SPATA5L1Q9BVQ7 753 aa4.23□□□□□ -1.73
SPG11-206ENST00000558093 ZMAT3Q9HA38 289 aaKnown RBP4.23□□□□□ -1.73
SPG11-206ENST00000558093 CPNE5Q9HCH3 593 aa4.23□□□□□ -1.73
SPG11-206ENST00000558093 IL17RBQ9NRM6 502 aa4.23□□□□□ -1.73
SPG11-206ENST00000558093 C1orf112Q9NSG2 853 aa4.23□□□□□ -1.73
SPG11-206ENST00000558093 ASB6Q9NWX5 421 aa4.23□□□□□ -1.73
SPG11-206ENST00000558093 EHD3Q9NZN3 535 aa4.23□□□□□ -1.73
SPG11-206ENST00000558093 XPR1Q9UBH6 696 aa4.23□□□□□ -1.73
SPG11-206ENST00000558093 SHOC2Q9UQ13 582 aa4.23□□□□□ -1.73
SPG11-206ENST00000558093 MED16Q9Y2X0 877 aa4.23□□□□□ -1.73
SPG11-206ENST00000558093 ADGRA2Q96PE1 1338 aa4.22□□□□□ -1.73
SPG11-206ENST00000558093 GOLGA6CA6NDK9 693 aa4.22□□□□□ -1.73
SPG11-206ENST00000558093 GOLGA6BA6NDN3 693 aa4.22□□□□□ -1.73
SPG11-206ENST00000558093 LINC00473A8K010 186 aa4.22□□□□□ -1.73
SPG11-206ENST00000558093 PRPF3O43395 683 aaKnown RBP4.22□□□□□ -1.73
SPG11-206ENST00000558093 TSPAN6O43657 245 aa4.22□□□□□ -1.73
SPG11-206ENST00000558093 TUSC2O75896 110 aa4.22□□□□□ -1.73
SPG11-206ENST00000558093 THP07101 528 aa4.22□□□□□ -1.73
SPG11-206ENST00000558093 GOLGA6DP0CG33 693 aa4.22□□□□□ -1.73
SPG11-206ENST00000558093 NPR1P16066 1061 aa4.22□□□□□ -1.73
SPG11-206ENST00000558093 ZFXP17010 805 aaPredicted RBP4.22□□□□□ -1.73
SPG11-206ENST00000558093 SLC7A1P30825 629 aa4.22□□□□□ -1.73
SPG11-206ENST00000558093 VIPR2P41587 438 aa4.22□□□□□ -1.73
SPG11-206ENST00000558093 TOB1P50616 345 aaPredicted RBP4.22□□□□□ -1.73
SPG11-206ENST00000558093 ZNF134P52741 427 aa4.22□□□□□ -1.73
SPG11-206ENST00000558093 UCP3P55916 312 aa4.22□□□□□ -1.73
SPG11-206ENST00000558093 BOP1Q14137 746 aaKnown RBP4.22□□□□□ -1.73
SPG11-206ENST00000558093 TBCCQ15814 346 aa4.22□□□□□ -1.73
SPG11-206ENST00000558093 SLC44A4Q53GD3 710 aa4.22□□□□□ -1.73
SPG11-206ENST00000558093 PLAC9Q5JTB6 97 aa4.22□□□□□ -1.73
SPG11-206ENST00000558093 ARHGAP40Q5TG30 622 aa4.22□□□□□ -1.73
SPG11-206ENST00000558093 ICE2Q659A1 982 aa4.22□□□□□ -1.73
SPG11-206ENST00000558093 KIAA0895LQ68EN5 471 aa4.22□□□□□ -1.73
SPG11-206ENST00000558093 NXNQ6DKJ4 435 aa4.22□□□□□ -1.73
SPG11-206ENST00000558093 DPY19L2P1Q6NXN4 242 aa4.22□□□□□ -1.73
SPG11-206ENST00000558093 TCEAL8Q8IYN2 117 aa4.22□□□□□ -1.73
SPG11-206ENST00000558093 MYO1HQ8N1T3 1032 aa4.22□□□□□ -1.73
SPG11-206ENST00000558093 RUNDC1Q96C34 613 aa4.22□□□□□ -1.73
SPG11-206ENST00000558093 MRGPRX1Q96LB2 322 aa4.22□□□□□ -1.73
SPG11-206ENST00000558093 UROC1Q96N76 676 aa4.22□□□□□ -1.73
SPG11-206ENST00000558093 AMBRA1Q9C0C7 1298 aa4.22□□□□□ -1.73
SPG11-206ENST00000558093 KLK15Q9H2R5 256 aa4.22□□□□□ -1.73
SPG11-206ENST00000558093 R3HDMLQ9H3Y0 253 aa4.22□□□□□ -1.73
SPG11-206ENST00000558093 GOLGA6AQ9NYA3 693 aa4.22□□□□□ -1.73
SPG11-206ENST00000558093 SERTAD3Q9UJW9 196 aa4.22□□□□□ -1.73
SPG11-206ENST00000558093 ST3GAL5Q9UNP4 418 aa4.22□□□□□ -1.73
SPG11-206ENST00000558093 CFAP69A5D8W1 941 aa4.21□□□□□ -1.74
SPG11-206ENST00000558093 GCOM1H8Y6P7 765 aaPredicted RBP4.21□□□□□ -1.74
SPG11-206ENST00000558093 DCLK1O15075 740 aa4.21□□□□□ -1.74
SPG11-206ENST00000558093 PPM1DO15297 605 aa4.21□□□□□ -1.74
SPG11-206ENST00000558093 TBC1D4O60343 1298 aa4.21□□□□□ -1.74
SPG11-206ENST00000558093 C1RP00736 705 aa4.21□□□□□ -1.74
SPG11-206ENST00000558093 NDUFB7P17568 137 aa4.21□□□□□ -1.74
SPG11-206ENST00000558093 GPD1P21695 349 aa4.21□□□□□ -1.74
SPG11-206ENST00000558093 SLC11A2P49281 568 aa4.21□□□□□ -1.74
SPG11-206ENST00000558093 AGFG1P52594 562 aaKnown RBP4.21□□□□□ -1.74
SPG11-206ENST00000558093 SLC13A2Q13183 592 aa4.21□□□□□ -1.74
SPG11-206ENST00000558093 RAB32Q13637 225 aa4.21□□□□□ -1.74
SPG11-206ENST00000558093 ZNF618Q5T7W0 954 aa4.21□□□□□ -1.74
SPG11-206ENST00000558093 RGS7BPQ6MZT1 257 aaPredicted RBP4.21□□□□□ -1.74
SPG11-206ENST00000558093 MAEAQ7L5Y9 396 aa4.21□□□□□ -1.74
SPG11-206ENST00000558093 PRIMA1Q86XR5 153 aa4.21□□□□□ -1.74
SPG11-206ENST00000558093 WDR75Q8IWA0 830 aaKnown RBP4.21□□□□□ -1.74
SPG11-206ENST00000558093 SLC15A4Q8N697 577 aa4.21□□□□□ -1.74
SPG11-206ENST00000558093 DNAJC5GQ8N7S2 189 aa4.21□□□□□ -1.74
SPG11-206ENST00000558093 KBTBD7Q8WVZ9 684 aa4.21□□□□□ -1.74
SPG11-206ENST00000558093 HAPLN3Q96S86 360 aa4.21□□□□□ -1.74
SPG11-206ENST00000558093 TMEM60Q9H2L4 133 aa4.21□□□□□ -1.74
SPG11-206ENST00000558093 ZSCAN32Q9NX65 697 aa4.21□□□□□ -1.74
SPG11-206ENST00000558093 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.21□□□□□ -1.74
SPG11-206ENST00000558093 KLHL42Q9P2K6 505 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms