RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 DCP1BQ8IZD4 617 aaKnown RBP9.43□□□□□ -0.9
SNRPA1-206ENST00000558059 FLCNQ8NFG4 579 aa9.43□□□□□ -0.9
SNRPA1-206ENST00000558059 GOLGA5Q8TBA6 731 aa9.43□□□□□ -0.9
SNRPA1-206ENST00000558059 SPATA18Q8TC71 538 aa9.43□□□□□ -0.9
SNRPA1-206ENST00000558059 SPPL2BQ8TCT7 592 aa9.43□□□□□ -0.9
SNRPA1-206ENST00000558059 PLEKHO2Q8TD55 490 aa9.43□□□□□ -0.9
SNRPA1-206ENST00000558059 C2orf15Q8WU43 125 aaKnown RBP9.43□□□□□ -0.9
SNRPA1-206ENST00000558059 PSMG2Q969U7 264 aa9.43□□□□□ -0.9
SNRPA1-206ENST00000558059 ELSPBP1Q96BH3 223 aa9.43□□□□□ -0.9
SNRPA1-206ENST00000558059 CCDC127Q96BQ5 260 aa9.43□□□□□ -0.9
SNRPA1-206ENST00000558059 HPDLQ96IR7 371 aa9.43□□□□□ -0.9
SNRPA1-206ENST00000558059 ASB16Q96NS5 453 aa9.43□□□□□ -0.9
SNRPA1-206ENST00000558059 FNBP1Q96RU3 617 aa9.43□□□□□ -0.9
SNRPA1-206ENST00000558059 CGRRF1Q99675 332 aa9.43□□□□□ -0.9
SNRPA1-206ENST00000558059 PRRX2Q99811 253 aa9.43□□□□□ -0.9
SNRPA1-206ENST00000558059 LPIN3Q9BQK8 851 aa9.43□□□□□ -0.9
SNRPA1-206ENST00000558059 ACBD6Q9BR61 282 aa9.43□□□□□ -0.9
SNRPA1-206ENST00000558059 ZNF334Q9HCZ1 680 aaPredicted RBP9.43□□□□□ -0.9
SNRPA1-206ENST00000558059 DDX43Q9NXZ2 648 aaKnown RBP9.43□□□□□ -0.9
SNRPA1-206ENST00000558059 CA14Q9ULX7 337 aa9.43□□□□□ -0.9
SNRPA1-206ENST00000558059 DMDP11532 3685 aa9.43□□□□□ -0.9
SNRPA1-206ENST00000558059 ANAPC1Q9H1A4 1944 aa9.43□□□□□ -0.9
SNRPA1-206ENST00000558059 OBSL1O75147 1896 aa9.42□□□□□ -0.9
SNRPA1-206ENST00000558059 USP34Q70CQ2 3546 aa9.42□□□□□ -0.9
SNRPA1-206ENST00000558059 A0A1W2PRU2 124 aa9.42□□□□□ -0.9
SNRPA1-206ENST00000558059 PDXKO00764 312 aa9.42□□□□□ -0.9
SNRPA1-206ENST00000558059 PRPF40AO75400 957 aaKnown RBP9.42□□□□□ -0.9
SNRPA1-206ENST00000558059 ACAT1P24752 427 aaKnown RBP9.42□□□□□ -0.9
SNRPA1-206ENST00000558059 LMO2P25791 158 aa9.42□□□□□ -0.9
SNRPA1-206ENST00000558059 LHX1P48742 406 aa9.42□□□□□ -0.9
SNRPA1-206ENST00000558059 CASP4P49662 377 aa9.42□□□□□ -0.9
SNRPA1-206ENST00000558059 PTPN5P54829 565 aa9.42□□□□□ -0.9
SNRPA1-206ENST00000558059 CLDN10P78369 228 aa9.42□□□□□ -0.9
SNRPA1-206ENST00000558059 MYL7Q01449 175 aa9.42□□□□□ -0.9
SNRPA1-206ENST00000558059 TSPY1Q01534 308 aa9.42□□□□□ -0.9
SNRPA1-206ENST00000558059 NFE2Q16621 373 aaPredicted RBP9.42□□□□□ -0.9
SNRPA1-206ENST00000558059 CCDC142Q17RM4 750 aa9.42□□□□□ -0.9
SNRPA1-206ENST00000558059 MGAT5BQ3V5L5 792 aa9.42□□□□□ -0.9
SNRPA1-206ENST00000558059 INTS6LQ5JSJ4 861 aaKnown RBP9.42□□□□□ -0.9
SNRPA1-206ENST00000558059 PHLDB3Q6NSJ2 640 aa9.42□□□□□ -0.9
SNRPA1-206ENST00000558059 FAM171BQ6P995 826 aa9.42□□□□□ -0.9
SNRPA1-206ENST00000558059 ITIH5Q86UX2 942 aa9.42□□□□□ -0.9
SNRPA1-206ENST00000558059 ADGRF2Q8IZF7 708 aa9.42□□□□□ -0.9
SNRPA1-206ENST00000558059 FMR1NBQ8N0W7 255 aaPredicted RBP9.42□□□□□ -0.9
SNRPA1-206ENST00000558059 PARD3BQ8TEW8 1205 aa9.42□□□□□ -0.9
SNRPA1-206ENST00000558059 GIPC2Q8TF65 315 aa9.42□□□□□ -0.9
SNRPA1-206ENST00000558059 KBTBD7Q8WVZ9 684 aa9.42□□□□□ -0.9
SNRPA1-206ENST00000558059 SMARCD2Q92925 531 aa9.42□□□□□ -0.9
SNRPA1-206ENST00000558059 SEPT5Q99719 369 aaPredicted RBP9.42□□□□□ -0.9
SNRPA1-206ENST00000558059 MKNK1Q9BUB5 465 aa9.42□□□□□ -0.9
SNRPA1-206ENST00000558059 TBC1D17Q9HA65 648 aa9.42□□□□□ -0.9
SNRPA1-206ENST00000558059 TRPV4Q9HBA0 871 aa9.42□□□□□ -0.9
SNRPA1-206ENST00000558059 IL21Q9HBE4 155 aa9.42□□□□□ -0.9
SNRPA1-206ENST00000558059 ZFP14Q9HCL3 533 aa9.42□□□□□ -0.9
SNRPA1-206ENST00000558059 ARHGEF3Q9NR81 526 aa9.42□□□□□ -0.9
SNRPA1-206ENST00000558059 ABI2Q9NYB9 513 aaPredicted RBP9.42□□□□□ -0.9
SNRPA1-206ENST00000558059 GTF3C4Q9UKN8 822 aa9.42□□□□□ -0.9
SNRPA1-206ENST00000558059 R3HCC1Q9Y3T6 440 aaKnown RBP9.42□□□□□ -0.9
SNRPA1-206ENST00000558059 PCDHB5Q9Y5E4 795 aa9.42□□□□□ -0.9
SNRPA1-206ENST00000558059 MYO15AQ9UKN7 3530 aa9.42□□□□□ -0.9
SNRPA1-206ENST00000558059 NUP210Q8TEM1 1887 aaPredicted RBP9.42□□□□□ -0.9
SNRPA1-206ENST00000558059 FAM186AA6NE01 2351 aa9.42□□□□□ -0.9
SNRPA1-206ENST00000558059 COL4A3Q01955 1670 aa9.42□□□□□ -0.9
SNRPA1-206ENST00000558059 TICRRQ7Z2Z1 1910 aa9.41□□□□□ -0.9
SNRPA1-206ENST00000558059 NCANO14594 1321 aa9.41□□□□□ -0.9
SNRPA1-206ENST00000558059 MYBPHLA2RUH7 354 aa9.41□□□□□ -0.9
SNRPA1-206ENST00000558059 LRRIQ3A6PVS8 624 aaPredicted RBP9.41□□□□□ -0.9
SNRPA1-206ENST00000558059 ATP2C2O75185 946 aa9.41□□□□□ -0.9
SNRPA1-206ENST00000558059 NR3C1P04150 777 aa9.41□□□□□ -0.9
SNRPA1-206ENST00000558059 HMGA1P17096 107 aaKnown RBP9.41□□□□□ -0.9
SNRPA1-206ENST00000558059 WARSP23381 471 aaKnown RBP9.41□□□□□ -0.9
SNRPA1-206ENST00000558059 CYP2F1P24903 491 aa9.41□□□□□ -0.9
SNRPA1-206ENST00000558059 GABRR2P28476 465 aa9.41□□□□□ -0.9
SNRPA1-206ENST00000558059 PCSK1P29120 753 aa9.41□□□□□ -0.9
SNRPA1-206ENST00000558059 VIPR2P41587 438 aa9.41□□□□□ -0.9
SNRPA1-206ENST00000558059 GPR15P49685 360 aa9.41□□□□□ -0.9
SNRPA1-206ENST00000558059 STARD6P59095 220 aa9.41□□□□□ -0.9
SNRPA1-206ENST00000558059 MYL6P60660 151 aa9.41□□□□□ -0.9
SNRPA1-206ENST00000558059 SNW1Q13573 536 aaKnown RBP9.41□□□□□ -0.9
SNRPA1-206ENST00000558059 KCNB1Q14721 858 aa9.41□□□□□ -0.9
SNRPA1-206ENST00000558059 SLC44A4Q53GD3 710 aa9.41□□□□□ -0.9
SNRPA1-206ENST00000558059 STXBP5Q5T5C0 1151 aa9.41□□□□□ -0.9
SNRPA1-206ENST00000558059 ENGASEQ8NFI3 743 aa9.41□□□□□ -0.9
SNRPA1-206ENST00000558059 ZSCAN18Q8TBC5 510 aaPredicted RBP9.41□□□□□ -0.9
SNRPA1-206ENST00000558059 RSPRY1Q96DX4 576 aa9.41□□□□□ -0.9
SNRPA1-206ENST00000558059 PI4K2AQ9BTU6 479 aa9.41□□□□□ -0.9
SNRPA1-206ENST00000558059 DDX23Q9BUQ8 820 aaKnown RBP9.41□□□□□ -0.9
SNRPA1-206ENST00000558059 GPR88Q9GZN0 384 aa9.41□□□□□ -0.9
SNRPA1-206ENST00000558059 XYLT2Q9H1B5 865 aa9.41□□□□□ -0.9
SNRPA1-206ENST00000558059 ABCB6Q9NP58 842 aa9.41□□□□□ -0.9
SNRPA1-206ENST00000558059 PLA2G2EQ9NZK7 142 aa9.41□□□□□ -0.9
SNRPA1-206ENST00000558059 TRAF3IP3Q9Y228 551 aa9.41□□□□□ -0.9
SNRPA1-206ENST00000558059 NME7Q9Y5B8 376 aa9.41□□□□□ -0.9
SNRPA1-206ENST00000558059 MYH10P35580 1976 aa9.41□□□□□ -0.9
SNRPA1-206ENST00000558059 SHISA7A6NL88 538 aa9.4□□□□□ -0.9
SNRPA1-206ENST00000558059 HEPACAM2A8MVW5 462 aa9.4□□□□□ -0.9
SNRPA1-206ENST00000558059 H0Y858 1186 aa9.4□□□□□ -0.9
SNRPA1-206ENST00000558059 TACC1O75410 805 aa9.4□□□□□ -0.9
SNRPA1-206ENST00000558059 FGF19O95750 216 aa9.4□□□□□ -0.9
SNRPA1-206ENST00000558059 STAU1O95793 577 aaKnown RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms