RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 FAM26FQ5R3K3 315 aa15.72■□□□□ 0.11
SHMT2-235ENST00000557740 CMTM8Q8IZV2 173 aa15.72■□□□□ 0.11
SHMT2-235ENST00000557740 TOP6BLQ8N6T0 577 aa15.72■□□□□ 0.11
SHMT2-235ENST00000557740 CELF5Q8N6W0 485 aaKnown RBP15.72■□□□□ 0.11
SHMT2-235ENST00000557740 SUMF1Q8NBK3 374 aa15.72■□□□□ 0.11
SHMT2-235ENST00000557740 ZBTB44Q8NCP5 570 aa15.72■□□□□ 0.11
SHMT2-235ENST00000557740 GLIS3Q8NEA6 775 aa15.72■□□□□ 0.11
SHMT2-235ENST00000557740 TTC8Q8TAM2 541 aa15.72■□□□□ 0.11
SHMT2-235ENST00000557740 SPATA18Q8TC71 538 aa15.72■□□□□ 0.11
SHMT2-235ENST00000557740 BPIFB1Q8TDL5 484 aa15.72■□□□□ 0.11
SHMT2-235ENST00000557740 HPS3Q969F9 1004 aa15.72■□□□□ 0.11
SHMT2-235ENST00000557740 SNX21Q969T3 373 aa15.72■□□□□ 0.11
SHMT2-235ENST00000557740 ZFYVE19Q96K21 471 aa15.72■□□□□ 0.11
SHMT2-235ENST00000557740 SMG9Q9H0W8 520 aaKnown RBP15.72■□□□□ 0.11
SHMT2-235ENST00000557740 MAGEF1Q9HAY2 307 aa15.72■□□□□ 0.11
SHMT2-235ENST00000557740 ABCB6Q9NP58 842 aa15.72■□□□□ 0.11
SHMT2-235ENST00000557740 GDAP2Q9NXN4 497 aa15.72■□□□□ 0.11
SHMT2-235ENST00000557740 HSPBP1Q9NZL4 362 aa15.72■□□□□ 0.11
SHMT2-235ENST00000557740 NCDNQ9UBB6 729 aa15.72■□□□□ 0.11
SHMT2-235ENST00000557740 SIX4Q9UIU6 781 aa15.72■□□□□ 0.11
SHMT2-235ENST00000557740 MAGED2Q9UNF1 606 aaPredicted RBP15.72■□□□□ 0.11
SHMT2-235ENST00000557740 SMG5Q9UPR3 1016 aaKnown RBP15.72■□□□□ 0.11
SHMT2-235ENST00000557740 PATJQ8NI35 1801 aa15.72■□□□□ 0.11
SHMT2-235ENST00000557740 ZNF292O60281 2723 aa15.72■□□□□ 0.11
SHMT2-235ENST00000557740 DMDP11532 3685 aa15.72■□□□□ 0.11
SHMT2-235ENST00000557740 TICRRQ7Z2Z1 1910 aa15.71■□□□□ 0.11
SHMT2-235ENST00000557740 SPECC1L-ADORA2AF8WAN1 911 aa15.71■□□□□ 0.11
SHMT2-235ENST00000557740 CSH1P0DML2 217 aa15.71■□□□□ 0.11
SHMT2-235ENST00000557740 CSH2P0DML3 217 aa15.71■□□□□ 0.11
SHMT2-235ENST00000557740 ACAT1P24752 427 aaKnown RBP15.71■□□□□ 0.11
SHMT2-235ENST00000557740 DDX6P26196 483 aaKnown RBP eCLIP15.71■□□□□ 0.11
SHMT2-235ENST00000557740 CTHP32929 405 aa15.71■□□□□ 0.11
SHMT2-235ENST00000557740 LHX1P48742 406 aa15.71■□□□□ 0.11
SHMT2-235ENST00000557740 GPR15P49685 360 aa15.71■□□□□ 0.11
SHMT2-235ENST00000557740 NRLP54845 237 aa15.71■□□□□ 0.11
SHMT2-235ENST00000557740 NLRP12P59046 1061 aa15.71■□□□□ 0.11
SHMT2-235ENST00000557740 FOXK2Q01167 660 aa15.71■□□□□ 0.11
SHMT2-235ENST00000557740 FOXD4L6Q3SYB3 417 aaPredicted RBP15.71■□□□□ 0.11
SHMT2-235ENST00000557740 SHC4Q6S5L8 630 aa15.71■□□□□ 0.11
SHMT2-235ENST00000557740 FOXD4L3Q6VB84 417 aaPredicted RBP15.71■□□□□ 0.11
SHMT2-235ENST00000557740 RALGPS2Q86X27 583 aaPredicted RBP15.71■□□□□ 0.11
SHMT2-235ENST00000557740 CBWD2Q8IUF1 395 aa15.71■□□□□ 0.11
SHMT2-235ENST00000557740 SPATA2LQ8IUW3 424 aaPredicted RBP15.71■□□□□ 0.11
SHMT2-235ENST00000557740 CXorf38Q8TB03 319 aa15.71■□□□□ 0.11
SHMT2-235ENST00000557740 MRPS31Q92665 395 aaKnown RBP15.71■□□□□ 0.11
SHMT2-235ENST00000557740 NELL1Q92832 810 aa15.71■□□□□ 0.11
SHMT2-235ENST00000557740 SECISBP2LQ93073 1101 aaKnown RBP15.71■□□□□ 0.11
SHMT2-235ENST00000557740 LRRC3BQ96PB8 259 aa15.71■□□□□ 0.11
SHMT2-235ENST00000557740 KIAA1586Q9HCI6 787 aa15.71■□□□□ 0.11
SHMT2-235ENST00000557740 INTS13Q9NVM9 706 aa15.71■□□□□ 0.11
SHMT2-235ENST00000557740 UXTQ9UBK9 157 aaPredicted RBP15.71■□□□□ 0.11
SHMT2-235ENST00000557740 MYBPHLA2RUH7 354 aa15.7■□□□□ 0.1
SHMT2-235ENST00000557740 LILRB5O75023 590 aa15.7■□□□□ 0.1
SHMT2-235ENST00000557740 ZSCAN22P10073 491 aaPredicted RBP15.7■□□□□ 0.1
SHMT2-235ENST00000557740 CHRNB1P11230 501 aa15.7■□□□□ 0.1
SHMT2-235ENST00000557740 PDIA4P13667 645 aaKnown RBP15.7■□□□□ 0.1
SHMT2-235ENST00000557740 HMGA1P17096 107 aaKnown RBP15.7■□□□□ 0.1
SHMT2-235ENST00000557740 ME1P48163 572 aa15.7■□□□□ 0.1
SHMT2-235ENST00000557740 DDR2Q16832 855 aa15.7■□□□□ 0.1
SHMT2-235ENST00000557740 DUOXA2Q1HG44 320 aa15.7■□□□□ 0.1
SHMT2-235ENST00000557740 SDHAF4Q5VUM1 108 aa15.7■□□□□ 0.1
SHMT2-235ENST00000557740 MAMSTRQ6ZN01 415 aa15.7■□□□□ 0.1
SHMT2-235ENST00000557740 OSTM1Q86WC4 334 aa15.7■□□□□ 0.1
SHMT2-235ENST00000557740 MAB21L3Q8N8X9 362 aa15.7■□□□□ 0.1
SHMT2-235ENST00000557740 STKLD1Q8NE28 680 aa15.7■□□□□ 0.1
SHMT2-235ENST00000557740 OR5B17Q8NGF7 314 aa15.7■□□□□ 0.1
SHMT2-235ENST00000557740 HPDLQ96IR7 371 aa15.7■□□□□ 0.1
SHMT2-235ENST00000557740 SLC46A2Q9BY10 475 aa15.7■□□□□ 0.1
SHMT2-235ENST00000557740 EPC1Q9H2F5 836 aa15.7■□□□□ 0.1
SHMT2-235ENST00000557740 KIF9Q9HAQ2 790 aa15.7■□□□□ 0.1
SHMT2-235ENST00000557740 FAM13BQ9NYF5 915 aa15.7■□□□□ 0.1
SHMT2-235ENST00000557740 GTSE1Q9NYZ3 720 aa15.7■□□□□ 0.1
SHMT2-235ENST00000557740 FANCMQ8IYD8 2048 aa15.7■□□□□ 0.1
SHMT2-235ENST00000557740 WDR87Q6ZQQ6 2873 aa15.69■□□□□ 0.1
SHMT2-235ENST00000557740 UBE4BO95155 1302 aa15.69■□□□□ 0.1
SHMT2-235ENST00000557740 PTPRJQ12913 1337 aa15.69■□□□□ 0.1
SHMT2-235ENST00000557740 TCHHQ07283 1943 aa15.69■□□□□ 0.1
SHMT2-235ENST00000557740 F13A1P00488 732 aa15.69■□□□□ 0.1
SHMT2-235ENST00000557740 F11P03951 625 aa15.69■□□□□ 0.1
SHMT2-235ENST00000557740 DLATP10515 647 aaKnown RBP15.69■□□□□ 0.1
SHMT2-235ENST00000557740 CYP2F1P24903 491 aa15.69■□□□□ 0.1
SHMT2-235ENST00000557740 CXCL12P48061 93 aa15.69■□□□□ 0.1
SHMT2-235ENST00000557740 TNK2Q07912 1038 aa15.69■□□□□ 0.1
SHMT2-235ENST00000557740 PON2Q15165 354 aa15.69■□□□□ 0.1
SHMT2-235ENST00000557740 SNRNP35Q16560 246 aaKnown RBP15.69■□□□□ 0.1
SHMT2-235ENST00000557740 SOWAHAQ2M3V2 549 aa15.69■□□□□ 0.1
SHMT2-235ENST00000557740 ITPRIPL2Q3MIP1 535 aa15.69■□□□□ 0.1
SHMT2-235ENST00000557740 DGKKQ5KSL6 1271 aa15.69■□□□□ 0.1
SHMT2-235ENST00000557740 CNNM4Q6P4Q7 775 aa15.69■□□□□ 0.1
SHMT2-235ENST00000557740 TXNDC11Q6PKC3 985 aa15.69■□□□□ 0.1
SHMT2-235ENST00000557740 C4orf50Q6ZRC1 276 aa15.69■□□□□ 0.1
SHMT2-235ENST00000557740 HS2ST1Q7LGA3 356 aa15.69■□□□□ 0.1
SHMT2-235ENST00000557740 TMEM150AQ86TG1 271 aa15.69■□□□□ 0.1
SHMT2-235ENST00000557740 WDR49Q8IV35 697 aa15.69■□□□□ 0.1
SHMT2-235ENST00000557740 SCN4BQ8IWT1 228 aa15.69■□□□□ 0.1
SHMT2-235ENST00000557740 SPEM1Q8N4L4 309 aa15.69■□□□□ 0.1
SHMT2-235ENST00000557740 DCLK2Q8N568 766 aa15.69■□□□□ 0.1
SHMT2-235ENST00000557740 FUBP3Q96I24 572 aaKnown RBP eCLIP15.69■□□□□ 0.1
SHMT2-235ENST00000557740 FNBP1Q96RU3 617 aa15.69■□□□□ 0.1
SHMT2-235ENST00000557740 PKMYT1Q99640 499 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms