RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 DNMT3BQ9UBC3 853 aaKnown RBP2.08□□□□□ -2.08
HIF1A-212ENST00000557538 CPNE7Q9UBL6 633 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 PCDHA6Q9UN73 950 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 AGAP1Q9UPQ3 857 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 DTNAQ9Y4J8 743 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 A0A087WV62 115 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 A0A087WZ62 844 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 APOL1O14791 398 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 TCEA3O75764 348 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 RECQL4O94761 1208 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 PRSS23O95084 383 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 FCER1AP12319 257 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 STT3AP46977 705 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 NXPH1P58417 271 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 EXOSC9Q06265 439 aaKnown RBP2.08□□□□□ -2.08
HIF1A-212ENST00000557538 FZD5Q13467 585 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 ATP1A4Q13733 1029 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 ARHGEF7Q14155 803 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 RRP1BQ14684 758 aaKnown RBP2.08□□□□□ -2.08
HIF1A-212ENST00000557538 BRD3Q15059 726 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 LONRF1Q17RB8 773 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 PDCD4Q53EL6 469 aaKnown RBP2.08□□□□□ -2.08
HIF1A-212ENST00000557538 INO80DQ53TQ3 878 aaPredicted RBP2.08□□□□□ -2.08
HIF1A-212ENST00000557538 MICALCLQ6ZW33 695 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 CLNKQ7Z7G1 428 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 OR56A1Q8NGH5 318 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 ZNF483Q8TF39 744 aaPredicted RBP2.08□□□□□ -2.08
HIF1A-212ENST00000557538 LRRC37BQ96QE4 947 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 OR14A2Q96R54 314 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 TBCBQ99426 244 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 NPAS1Q99742 590 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 PAAF1Q9BRP4 392 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 KRTAP4-5Q9BYR2 181 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 GALNT9Q9HCQ5 603 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 ARFGAP3Q9NP61 516 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 ALG13Q9NP73 1137 aaKnown RBP2.08□□□□□ -2.08
HIF1A-212ENST00000557538 RGL1Q9NZL6 768 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 UNC5CO95185 931 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 ONECUT2O95948 504 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 ELANEP08246 267 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 BRAFP15056 766 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 ZEB1P37275 1124 aaPredicted RBP2.08□□□□□ -2.08
HIF1A-212ENST00000557538 TECP42680 631 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 CARSP49589 748 aaKnown RBP2.08□□□□□ -2.08
HIF1A-212ENST00000557538 RPS7P62081 194 aaKnown RBP2.08□□□□□ -2.08
HIF1A-212ENST00000557538 SLC13A2Q13183 592 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 ZRSR2Q15696 482 aaKnown RBP2.08□□□□□ -2.08
HIF1A-212ENST00000557538 ARL13BQ3SXY8 428 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 FAM209BQ5JX69 171 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 USP51Q70EK9 711 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 MED25Q71SY5 747 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 LIMS2Q7Z4I7 341 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 CACNA2D3Q8IZS8 1091 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 MBD3L2Q8NHZ7 208 aaPredicted RBP2.08□□□□□ -2.08
HIF1A-212ENST00000557538 TRIB1Q96RU8 372 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 ARPC5LQ9BPX5 153 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 DDX23Q9BUQ8 820 aaKnown RBP2.08□□□□□ -2.08
HIF1A-212ENST00000557538 KLC2Q9H0B6 622 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 PARPBPQ9NWS1 579 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 RNF181Q9P0P0 153 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 CDHR4A6H8M9 788 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 NTSR2O95665 410 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 KITP10721 976 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 HSD3B1P14060 373 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 FGFR4P22455 802 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 ZNF135P52742 658 aaPredicted RBP2.07□□□□□ -2.08
HIF1A-212ENST00000557538 BCAT1P54687 386 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 RPS16P62249 146 aaKnown RBP2.07□□□□□ -2.08
HIF1A-212ENST00000557538 IRX6P78412 446 aaPredicted RBP2.07□□□□□ -2.08
HIF1A-212ENST00000557538 MAPKAPK3Q16644 382 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 NBPF8Q3BBV2 869 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 TAPT1Q6NXT6 567 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 XRRA1Q6P2D8 792 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 VWA1Q6PCB0 445 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 XYLT1Q86Y38 959 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 ELOA2Q8IYF1 753 aaPredicted RBP2.07□□□□□ -2.08
HIF1A-212ENST00000557538 TBC1D15Q8TC07 691 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 TRAPPC12Q8WVT3 735 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 IQCDQ96DY2 449 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 TMEM120AQ9BXJ8 343 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 AMBRA1Q9C0C7 1298 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 TP63Q9H3D4 680 aaPredicted RBP2.07□□□□□ -2.08
HIF1A-212ENST00000557538 GPRC5BQ9NZH0 403 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 FNIP2Q9P278 1114 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 SEMA5BQ9P283 1151 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 SRRDQ9UH36 339 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 NFU1Q9UMS0 254 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 TCAF1Q9Y4C2 921 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 PCDHGB6Q9Y5F9 930 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 RAD54BQ9Y620 910 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 LOC102723971A0A1B0GUV8 181 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 ZAR1LA6NP61 321 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 LEFTY2O00292 366 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 KIAA0391O15091 583 aaKnown RBP2.07□□□□□ -2.08
HIF1A-212ENST00000557538 MUSKO15146 869 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 FFAR2O15552 330 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 TLR5O60602 858 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 CBFA2T3O75081 653 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 FAM155BO75949 473 aa2.07□□□□□ -2.08
HIF1A-212ENST00000557538 EGR2P11161 476 aaPredicted RBP2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms