RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 BRAFP15056 766 aa5.23□□□□□ -1.57
PRPF39-210ENST00000556718 MALP21145 153 aa5.23□□□□□ -1.57
PRPF39-210ENST00000556718 PIK3CBP42338 1070 aa5.23□□□□□ -1.57
PRPF39-210ENST00000556718 SLC6A9P48067 706 aa5.23□□□□□ -1.57
PRPF39-210ENST00000556718 CACNA2D1P54289 1103 aa5.23□□□□□ -1.57
PRPF39-210ENST00000556718 RAP2BP61225 183 aa5.23□□□□□ -1.57
PRPF39-210ENST00000556718 TARDBPQ13148 414 aaKnown RBP eCLIP5.23□□□□□ -1.57
PRPF39-210ENST00000556718 SPDYE7PQ495Y7 208 aa5.23□□□□□ -1.57
PRPF39-210ENST00000556718 FAM47AQ5JRC9 791 aa5.23□□□□□ -1.57
PRPF39-210ENST00000556718 DGKKQ5KSL6 1271 aa5.23□□□□□ -1.57
PRPF39-210ENST00000556718 SWSAP1Q6NVH7 229 aa5.23□□□□□ -1.57
PRPF39-210ENST00000556718 Q6ZVL8 140 aa5.23□□□□□ -1.57
PRPF39-210ENST00000556718 CPXCR1Q8N123 301 aa5.23□□□□□ -1.57
PRPF39-210ENST00000556718 MYRIPQ8NFW9 859 aa5.23□□□□□ -1.57
PRPF39-210ENST00000556718 PLBD2Q8NHP8 589 aa5.23□□□□□ -1.57
PRPF39-210ENST00000556718 SMG7Q92540 1137 aaKnown RBP5.23□□□□□ -1.57
PRPF39-210ENST00000556718 TRIM63Q969Q1 353 aa5.23□□□□□ -1.57
PRPF39-210ENST00000556718 RAB24Q969Q5 203 aa5.23□□□□□ -1.57
PRPF39-210ENST00000556718 FUBP1Q96AE4 644 aaKnown RBP5.23□□□□□ -1.57
PRPF39-210ENST00000556718 NACC2Q96BF6 587 aa5.23□□□□□ -1.57
PRPF39-210ENST00000556718 PDLIM2Q96JY6 352 aa5.23□□□□□ -1.57
PRPF39-210ENST00000556718 ZC3H10Q96K80 434 aaKnown RBP5.23□□□□□ -1.57
PRPF39-210ENST00000556718 MRGPRX4Q96LA9 322 aa5.23□□□□□ -1.57
PRPF39-210ENST00000556718 NAP1L4Q99733 375 aaKnown RBP5.23□□□□□ -1.57
PRPF39-210ENST00000556718 SLC29A3Q9BZD2 475 aa5.23□□□□□ -1.57
PRPF39-210ENST00000556718 UBA5Q9GZZ9 404 aa5.23□□□□□ -1.57
PRPF39-210ENST00000556718 ZMAT3Q9HA38 289 aaKnown RBP5.23□□□□□ -1.57
PRPF39-210ENST00000556718 IL17RBQ9NRM6 502 aa5.23□□□□□ -1.57
PRPF39-210ENST00000556718 PIH1D1Q9NWS0 290 aaKnown RBP5.23□□□□□ -1.57
PRPF39-210ENST00000556718 CPA4Q9UI42 421 aa5.23□□□□□ -1.57
PRPF39-210ENST00000556718 NOX1Q9Y5S8 564 aa5.23□□□□□ -1.57
PRPF39-210ENST00000556718 SETD1BQ9UPS6 1966 aaKnown RBP5.22□□□□□ -1.57
PRPF39-210ENST00000556718 hCG_1642624A0A1W2PR95 340 aa5.22□□□□□ -1.57
PRPF39-210ENST00000556718 PJA2O43164 708 aa5.22□□□□□ -1.57
PRPF39-210ENST00000556718 IL2RBP14784 551 aa5.22□□□□□ -1.57
PRPF39-210ENST00000556718 DDCP20711 480 aa5.22□□□□□ -1.57
PRPF39-210ENST00000556718 TNFSF4P23510 183 aa5.22□□□□□ -1.57
PRPF39-210ENST00000556718 PTPN7P35236 360 aa5.22□□□□□ -1.57
PRPF39-210ENST00000556718 SREBF1P36956 1147 aa5.22□□□□□ -1.57
PRPF39-210ENST00000556718 HALP42357 657 aa5.22□□□□□ -1.57
PRPF39-210ENST00000556718 STT3AP46977 705 aa5.22□□□□□ -1.57
PRPF39-210ENST00000556718 CASP5P51878 434 aa5.22□□□□□ -1.57
PRPF39-210ENST00000556718 PROK1P58294 105 aa5.22□□□□□ -1.57
PRPF39-210ENST00000556718 TLE1Q04724 770 aa5.22□□□□□ -1.57
PRPF39-210ENST00000556718 CNGA2Q16280 664 aa5.22□□□□□ -1.57
PRPF39-210ENST00000556718 KHDC1LQ5JSQ8 128 aa5.22□□□□□ -1.57
PRPF39-210ENST00000556718 IZUMO3Q5VZ72 239 aa5.22□□□□□ -1.57
PRPF39-210ENST00000556718 SKAP1Q86WV1 359 aa5.22□□□□□ -1.57
PRPF39-210ENST00000556718 TRMT2AQ8IZ69 625 aaKnown RBP5.22□□□□□ -1.57
PRPF39-210ENST00000556718 CCDC33Q8N5R6 958 aa5.22□□□□□ -1.57
PRPF39-210ENST00000556718 IL31RAQ8NI17 732 aa5.22□□□□□ -1.57
PRPF39-210ENST00000556718 ZNF778Q96MU6 729 aa5.22□□□□□ -1.57
PRPF39-210ENST00000556718 NT5C1BQ96P26 610 aa5.22□□□□□ -1.57
PRPF39-210ENST00000556718 UNKQ9C0B0 810 aaKnown RBP5.22□□□□□ -1.57
PRPF39-210ENST00000556718 CASS4Q9NQ75 786 aa5.22□□□□□ -1.57
PRPF39-210ENST00000556718 MOCS1Q9NZB8 636 aa5.22□□□□□ -1.57
PRPF39-210ENST00000556718 AJAP1Q9UKB5 411 aaPredicted RBP5.22□□□□□ -1.57
PRPF39-210ENST00000556718 SIK3Q9Y2K2 1263 aa5.22□□□□□ -1.57
PRPF39-210ENST00000556718 CEP83Q9Y592 693 aa5.22□□□□□ -1.57
PRPF39-210ENST00000556718 ATRNL1Q5VV63 1379 aa5.21□□□□□ -1.58
PRPF39-210ENST00000556718 AATKQ6ZMQ8 1374 aa5.21□□□□□ -1.58
PRPF39-210ENST00000556718 A0A1B0GTW7 788 aa5.21□□□□□ -1.58
PRPF39-210ENST00000556718 POM121BA6NF01 834 aa5.21□□□□□ -1.58
PRPF39-210ENST00000556718 TBX3O15119 743 aa5.21□□□□□ -1.58
PRPF39-210ENST00000556718 KITP10721 976 aa5.21□□□□□ -1.58
PRPF39-210ENST00000556718 FGFR4P22455 802 aa5.21□□□□□ -1.58
PRPF39-210ENST00000556718 PAX3P23760 479 aa5.21□□□□□ -1.58
PRPF39-210ENST00000556718 CXADRP78310 365 aa5.21□□□□□ -1.58
PRPF39-210ENST00000556718 MRPS35P82673 323 aaKnown RBP5.21□□□□□ -1.58
PRPF39-210ENST00000556718 CREMQ03060 361 aa5.21□□□□□ -1.58
PRPF39-210ENST00000556718 TNFAIP2Q03169 654 aa5.21□□□□□ -1.58
PRPF39-210ENST00000556718 SNAPC2Q13487 334 aa5.21□□□□□ -1.58
PRPF39-210ENST00000556718 TMEM95Q3KNT9 176 aa5.21□□□□□ -1.58
PRPF39-210ENST00000556718 FLYWCH1Q4VC44 716 aa5.21□□□□□ -1.58
PRPF39-210ENST00000556718 FAM209BQ5JX69 171 aa5.21□□□□□ -1.58
PRPF39-210ENST00000556718 ZNF354CQ86Y25 554 aa5.21□□□□□ -1.58
PRPF39-210ENST00000556718 PAF1Q8N7H5 531 aa5.21□□□□□ -1.58
PRPF39-210ENST00000556718 IFI44Q8TCB0 444 aa5.21□□□□□ -1.58
PRPF39-210ENST00000556718 ACTRT2Q8TDY3 377 aa5.21□□□□□ -1.58
PRPF39-210ENST00000556718 PNISRQ8TF01 805 aaKnown RBP5.21□□□□□ -1.58
PRPF39-210ENST00000556718 CASKIN2Q8WXE0 1202 aa5.21□□□□□ -1.58
PRPF39-210ENST00000556718 CCT6BQ92526 530 aa5.21□□□□□ -1.58
PRPF39-210ENST00000556718 DMRTA2Q96SC8 542 aa5.21□□□□□ -1.58
PRPF39-210ENST00000556718 CRB3Q9BUF7 120 aa5.21□□□□□ -1.58
PRPF39-210ENST00000556718 LDAHQ9H6V9 325 aa5.21□□□□□ -1.58
PRPF39-210ENST00000556718 ATP6V0A4Q9HBG4 840 aa5.21□□□□□ -1.58
PRPF39-210ENST00000556718 TMEM74BQ9NUR3 256 aa5.21□□□□□ -1.58
PRPF39-210ENST00000556718 ASB6Q9NWX5 421 aa5.21□□□□□ -1.58
PRPF39-210ENST00000556718 FNIP2Q9P278 1114 aa5.21□□□□□ -1.58
PRPF39-210ENST00000556718 LRIT1Q9P2V4 623 aa5.21□□□□□ -1.58
PRPF39-210ENST00000556718 MORC2Q9Y6X9 1032 aaPredicted RBP5.21□□□□□ -1.58
PRPF39-210ENST00000556718 NBNO60934 754 aa5.2□□□□□ -1.58
PRPF39-210ENST00000556718 PRSS23O95084 383 aa5.2□□□□□ -1.58
PRPF39-210ENST00000556718 IL18RAPO95256 599 aa5.2□□□□□ -1.58
PRPF39-210ENST00000556718 GNAI3P08754 354 aa5.2□□□□□ -1.58
PRPF39-210ENST00000556718 PARP1P09874 1014 aaKnown RBP5.2□□□□□ -1.58
PRPF39-210ENST00000556718 PPM1AP35813 382 aa5.2□□□□□ -1.58
PRPF39-210ENST00000556718 MAPK10P53779 464 aa5.2□□□□□ -1.58
PRPF39-210ENST00000556718 CTXN1P60606 82 aa5.2□□□□□ -1.58
PRPF39-210ENST00000556718 GNAI1P63096 354 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms