RNA–Protein interactions for RNA: ENST00000556687.5

RBM23-222, Transcript of RNA binding motif protein 23, human

TSL 2

Gene RBM23, Length 1,124 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM23-222	ENST00000556687	NFE2	Q16621	373 aa	Predicted RBP	13.12	□□□□□ -0.31
RBM23-222	ENST00000556687	DDR2	Q16832	855 aa		13.12	□□□□□ -0.31
RBM23-222	ENST00000556687	WDR72	Q3MJ13	1102 aa		13.12	□□□□□ -0.31
RBM23-222	ENST00000556687	SLC44A4	Q53GD3	710 aa		13.12	□□□□□ -0.31
RBM23-222	ENST00000556687	SDHAF4	Q5VUM1	108 aa		13.12	□□□□□ -0.31
RBM23-222	ENST00000556687	VIT	Q6UXI7	678 aa		13.12	□□□□□ -0.31
RBM23-222	ENST00000556687	ITIH5	Q86UX2	942 aa		13.12	□□□□□ -0.31
RBM23-222	ENST00000556687	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	13.12	□□□□□ -0.31
RBM23-222	ENST00000556687	SPATA18	Q8TC71	538 aa		13.12	□□□□□ -0.31
RBM23-222	ENST00000556687	TMEM174	Q8WUU8	243 aa		13.12	□□□□□ -0.31
RBM23-222	ENST00000556687	SMARCD2	Q92925	531 aa		13.12	□□□□□ -0.31
RBM23-222	ENST00000556687	RSPRY1	Q96DX4	576 aa		13.12	□□□□□ -0.31
RBM23-222	ENST00000556687	MRPL45	Q9BRJ2	306 aa	Known RBP	13.12	□□□□□ -0.31
RBM23-222	ENST00000556687	MKNK1	Q9BUB5	465 aa		13.12	□□□□□ -0.31
RBM23-222	ENST00000556687	ATXN3L	Q9H3M9	355 aa		13.12	□□□□□ -0.31
RBM23-222	ENST00000556687	SLITRK6	Q9H5Y7	841 aa		13.12	□□□□□ -0.31
RBM23-222	ENST00000556687	IL21	Q9HBE4	155 aa		13.12	□□□□□ -0.31
RBM23-222	ENST00000556687	TRAF3IP3	Q9Y228	551 aa		13.12	□□□□□ -0.31
RBM23-222	ENST00000556687	DENND4C	Q5VZ89	1909 aa		13.11	□□□□□ -0.31
RBM23-222	ENST00000556687	GOLGA6L4	A6NEF3	574 aa		13.11	□□□□□ -0.31
RBM23-222	ENST00000556687	GALR2	O43603	387 aa	Predicted RBP	13.11	□□□□□ -0.31
RBM23-222	ENST00000556687	CALU	O43852	315 aa	Predicted RBP	13.11	□□□□□ -0.31
RBM23-222	ENST00000556687	PHACTR2	O75167	634 aa		13.11	□□□□□ -0.31
RBM23-222	ENST00000556687	VNN1	O95497	513 aa		13.11	□□□□□ -0.31
RBM23-222	ENST00000556687	HMGA1	P17096	107 aa	Known RBP	13.11	□□□□□ -0.31
RBM23-222	ENST00000556687	WARS	P23381	471 aa	Known RBP	13.11	□□□□□ -0.31
RBM23-222	ENST00000556687	PCSK1	P29120	753 aa		13.11	□□□□□ -0.31
RBM23-222	ENST00000556687	STARD6	P59095	220 aa		13.11	□□□□□ -0.31
RBM23-222	ENST00000556687	PSMC1	P62191	440 aa	Known RBP	13.11	□□□□□ -0.31
RBM23-222	ENST00000556687	CLDN10	P78369	228 aa		13.11	□□□□□ -0.31
RBM23-222	ENST00000556687	CYP4F8	P98187	520 aa		13.11	□□□□□ -0.31
RBM23-222	ENST00000556687	TRPC3	Q13507	836 aa		13.11	□□□□□ -0.31
RBM23-222	ENST00000556687	VEPH1	Q14D04	833 aa		13.11	□□□□□ -0.31
RBM23-222	ENST00000556687	TDRD10	Q5VZ19	366 aa	Known RBP	13.11	□□□□□ -0.31
RBM23-222	ENST00000556687	CEP135	Q66GS9	1140 aa		13.11	□□□□□ -0.31
RBM23-222	ENST00000556687	PHLDB3	Q6NSJ2	640 aa		13.11	□□□□□ -0.31
RBM23-222	ENST00000556687	FAM171B	Q6P995	826 aa		13.11	□□□□□ -0.31
RBM23-222	ENST00000556687	SMYD4	Q8IYR2	804 aa	Predicted RBP	13.11	□□□□□ -0.31
RBM23-222	ENST00000556687	GUF1	Q8N442	669 aa	Known RBP	13.11	□□□□□ -0.31
RBM23-222	ENST00000556687	ERCC4	Q92889	916 aa	Predicted RBP	13.11	□□□□□ -0.31
RBM23-222	ENST00000556687	PHOX2B	Q99453	314 aa		13.11	□□□□□ -0.31
RBM23-222	ENST00000556687	PRRX2	Q99811	253 aa		13.11	□□□□□ -0.31
RBM23-222	ENST00000556687	SYT15	Q9BQS2	421 aa		13.11	□□□□□ -0.31
RBM23-222	ENST00000556687	GPR88	Q9GZN0	384 aa		13.11	□□□□□ -0.31
RBM23-222	ENST00000556687	XYLT2	Q9H1B5	865 aa		13.11	□□□□□ -0.31
RBM23-222	ENST00000556687	TRPV4	Q9HBA0	871 aa		13.11	□□□□□ -0.31
RBM23-222	ENST00000556687	CRTAC1	Q9NQ79	661 aa		13.11	□□□□□ -0.31
RBM23-222	ENST00000556687	HEPACAM2	A8MVW5	462 aa		13.1	□□□□□ -0.31
RBM23-222	ENST00000556687		H0Y858	1186 aa		13.1	□□□□□ -0.31
RBM23-222	ENST00000556687	LRRN2	O75325	713 aa		13.1	□□□□□ -0.31
RBM23-222	ENST00000556687	KIF20A	O95235	890 aa		13.1	□□□□□ -0.31
RBM23-222	ENST00000556687	STAU1	O95793	577 aa	Known RBP	13.1	□□□□□ -0.31
RBM23-222	ENST00000556687	F11	P03951	625 aa		13.1	□□□□□ -0.31
RBM23-222	ENST00000556687	CD72	P21854	359 aa		13.1	□□□□□ -0.31
RBM23-222	ENST00000556687	RFX1	P22670	979 aa		13.1	□□□□□ -0.31
RBM23-222	ENST00000556687	GNL1	P36915	607 aa	Predicted RBP	13.1	□□□□□ -0.31
RBM23-222	ENST00000556687	PTPN5	P54829	565 aa		13.1	□□□□□ -0.31
RBM23-222	ENST00000556687	BIRC3	Q13489	604 aa		13.1	□□□□□ -0.31
RBM23-222	ENST00000556687	MLF2	Q15773	248 aa	Predicted RBP	13.1	□□□□□ -0.31
RBM23-222	ENST00000556687	TAF12	Q16514	161 aa		13.1	□□□□□ -0.31
RBM23-222	ENST00000556687	C1orf220	Q5T0J3	134 aa		13.1	□□□□□ -0.31
RBM23-222	ENST00000556687	GPR158	Q5T848	1215 aa		13.1	□□□□□ -0.31
RBM23-222	ENST00000556687	TMEM150A	Q86TG1	271 aa		13.1	□□□□□ -0.31
RBM23-222	ENST00000556687	SPATA2L	Q8IUW3	424 aa	Predicted RBP	13.1	□□□□□ -0.31
RBM23-222	ENST00000556687	ARID3B	Q8IVW6	561 aa	Predicted RBP	13.1	□□□□□ -0.31
RBM23-222	ENST00000556687	OR6B3	Q8NGW1	331 aa		13.1	□□□□□ -0.31
RBM23-222	ENST00000556687	TRMT61B	Q9BVS5	477 aa	Known RBP	13.1	□□□□□ -0.31
RBM23-222	ENST00000556687	FOXQ1	Q9C009	403 aa		13.1	□□□□□ -0.31
RBM23-222	ENST00000556687	NXF1	Q9UBU9	619 aa	Known RBP	13.1	□□□□□ -0.31
RBM23-222	ENST00000556687	CDH9	Q9ULB4	789 aa		13.1	□□□□□ -0.31
RBM23-222	ENST00000556687	CACNA1H	O95180	2353 aa		13.09	□□□□□ -0.31
RBM23-222	ENST00000556687	OBSL1	O75147	1896 aa		13.09	□□□□□ -0.31
RBM23-222	ENST00000556687	TACC1	O75410	805 aa		13.09	□□□□□ -0.31
RBM23-222	ENST00000556687	AKAP3	O75969	853 aa		13.09	□□□□□ -0.31
RBM23-222	ENST00000556687	FGF19	O95750	216 aa		13.09	□□□□□ -0.31
RBM23-222	ENST00000556687	DCN	P07585	359 aa	Known RBP	13.09	□□□□□ -0.31
RBM23-222	ENST00000556687	PSMC3	P17980	439 aa		13.09	□□□□□ -0.31
RBM23-222	ENST00000556687	NR2F2	P24468	414 aa		13.09	□□□□□ -0.31
RBM23-222	ENST00000556687	GDI1	P31150	447 aa		13.09	□□□□□ -0.31
RBM23-222	ENST00000556687	ATIC	P31939	592 aa		13.09	□□□□□ -0.31
RBM23-222	ENST00000556687	NUBP1	P53384	320 aa		13.09	□□□□□ -0.31
RBM23-222	ENST00000556687	AP3M2	P53677	418 aa		13.09	□□□□□ -0.31
RBM23-222	ENST00000556687	CDH8	P55286	799 aa		13.09	□□□□□ -0.31
RBM23-222	ENST00000556687	NLRP12	P59046	1061 aa		13.09	□□□□□ -0.31
RBM23-222	ENST00000556687	RPL10A	P62906	217 aa	Known RBP	13.09	□□□□□ -0.31
RBM23-222	ENST00000556687	TNNC1	P63316	161 aa		13.09	□□□□□ -0.31
RBM23-222	ENST00000556687	PFKP	Q01813	784 aa		13.09	□□□□□ -0.31
RBM23-222	ENST00000556687	FAM160A1	Q05DH4	1040 aa		13.09	□□□□□ -0.31
RBM23-222	ENST00000556687	NCOA4	Q13772	614 aa		13.09	□□□□□ -0.31
RBM23-222	ENST00000556687	NFIL3	Q16649	462 aa		13.09	□□□□□ -0.31
RBM23-222	ENST00000556687	CFAP221	Q4G0U5	840 aa		13.09	□□□□□ -0.31
RBM23-222	ENST00000556687	SV2A	Q7L0J3	742 aa		13.09	□□□□□ -0.31
RBM23-222	ENST00000556687	MFSD6L	Q8IWD5	586 aa		13.09	□□□□□ -0.31
RBM23-222	ENST00000556687	SCN4B	Q8IWT1	228 aa		13.09	□□□□□ -0.31
RBM23-222	ENST00000556687	DTWD2	Q8NBA8	298 aa		13.09	□□□□□ -0.31
RBM23-222	ENST00000556687	TMC2	Q8TDI7	906 aa		13.09	□□□□□ -0.31
RBM23-222	ENST00000556687	MYLPF	Q96A32	169 aa		13.09	□□□□□ -0.31
RBM23-222	ENST00000556687	SYAP1	Q96A49	352 aa	Predicted RBP	13.09	□□□□□ -0.31
RBM23-222	ENST00000556687	LRRC3B	Q96PB8	259 aa		13.09	□□□□□ -0.31
RBM23-222	ENST00000556687	SLC46A2	Q9BY10	475 aa		13.09	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms