RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 ARSAP15289 507 aa12.83□□□□□ -0.36
ACTN1-221ENST00000556571 HMGA1P17096 107 aaKnown RBP12.83□□□□□ -0.36
ACTN1-221ENST00000556571 NMT1P30419 496 aaKnown RBP12.83□□□□□ -0.36
ACTN1-221ENST00000556571 ABCD1P33897 745 aa12.83□□□□□ -0.36
ACTN1-221ENST00000556571 TAF6P49848 677 aa12.83□□□□□ -0.36
ACTN1-221ENST00000556571 NOVA1P51513 510 aaKnown RBP12.83□□□□□ -0.36
ACTN1-221ENST00000556571 CDR1P51861 262 aa12.83□□□□□ -0.36
ACTN1-221ENST00000556571 ATP2C1P98194 919 aaPredicted RBP12.83□□□□□ -0.36
ACTN1-221ENST00000556571 CREB5Q02930 508 aa12.83□□□□□ -0.36
ACTN1-221ENST00000556571 TMEM119Q4V9L6 283 aa12.83□□□□□ -0.36
ACTN1-221ENST00000556571 DAB2IPQ5VWQ8 1189 aa12.83□□□□□ -0.36
ACTN1-221ENST00000556571 TXNDC8Q6A555 127 aa12.83□□□□□ -0.36
ACTN1-221ENST00000556571 TCEAL6Q6IPX3 200 aa12.83□□□□□ -0.36
ACTN1-221ENST00000556571 CPA6Q8N4T0 437 aa12.83□□□□□ -0.36
ACTN1-221ENST00000556571 MYCT1Q8N699 235 aa12.83□□□□□ -0.36
ACTN1-221ENST00000556571 TCEAL3Q969E4 200 aa12.83□□□□□ -0.36
ACTN1-221ENST00000556571 ACDQ96AP0 544 aa12.83□□□□□ -0.36
ACTN1-221ENST00000556571 CCSER1Q9C0I3 900 aa12.83□□□□□ -0.36
ACTN1-221ENST00000556571 SH2B1Q9NRF2 756 aaPredicted RBP12.83□□□□□ -0.36
ACTN1-221ENST00000556571 POLR3BQ9NW08 1133 aaPredicted RBP12.83□□□□□ -0.36
ACTN1-221ENST00000556571 ABI2Q9NYB9 513 aaPredicted RBP12.83□□□□□ -0.36
ACTN1-221ENST00000556571 C2CD2Q9Y426 696 aa12.83□□□□□ -0.36
ACTN1-221ENST00000556571 PCDHB5Q9Y5E4 795 aa12.83□□□□□ -0.36
ACTN1-221ENST00000556571 BAHCC1Q9P281 2608 aa12.83□□□□□ -0.36
ACTN1-221ENST00000556571 FRYQ5TBA9 3013 aa12.83□□□□□ -0.36
ACTN1-221ENST00000556571 ATG2BQ96BY7 2078 aa12.82□□□□□ -0.36
ACTN1-221ENST00000556571 C4orf47A7E2U8 309 aa12.82□□□□□ -0.36
ACTN1-221ENST00000556571 K7ENM7 598 aa12.82□□□□□ -0.36
ACTN1-221ENST00000556571 TRAK2O60296 914 aa12.82□□□□□ -0.36
ACTN1-221ENST00000556571 GJA4P35212 333 aa12.82□□□□□ -0.36
ACTN1-221ENST00000556571 DMC1Q14565 340 aa12.82□□□□□ -0.36
ACTN1-221ENST00000556571 RILPL1Q5EBL4 403 aa12.82□□□□□ -0.36
ACTN1-221ENST00000556571 WSCD1Q658N2 575 aa12.82□□□□□ -0.36
ACTN1-221ENST00000556571 C11orf74Q86VG3 221 aa12.82□□□□□ -0.36
ACTN1-221ENST00000556571 RPLP0P6Q8NHW5 317 aa12.82□□□□□ -0.36
ACTN1-221ENST00000556571 CCDC26Q8TAB7 109 aa12.82□□□□□ -0.36
ACTN1-221ENST00000556571 REEP2Q9BRK0 252 aa12.82□□□□□ -0.36
ACTN1-221ENST00000556571 ECT2Q9H8V3 914 aa12.82□□□□□ -0.36
ACTN1-221ENST00000556571 PARVGQ9HBI0 331 aa12.82□□□□□ -0.36
ACTN1-221ENST00000556571 DPP3Q9NY33 737 aa12.82□□□□□ -0.36
ACTN1-221ENST00000556571 UXTQ9UBK9 157 aaPredicted RBP12.82□□□□□ -0.36
ACTN1-221ENST00000556571 VWA3AA6NCI4 1184 aa12.81□□□□□ -0.36
ACTN1-221ENST00000556571 KPNA7A9QM74 516 aa12.81□□□□□ -0.36
ACTN1-221ENST00000556571 DCLK1O15075 740 aa12.81□□□□□ -0.36
ACTN1-221ENST00000556571 SLC26A4O43511 780 aa12.81□□□□□ -0.36
ACTN1-221ENST00000556571 PRPF40AO75400 957 aaKnown RBP12.81□□□□□ -0.36
ACTN1-221ENST00000556571 FAM13AO94988 1023 aa12.81□□□□□ -0.36
ACTN1-221ENST00000556571 GBP1P32455 592 aa12.81□□□□□ -0.36
ACTN1-221ENST00000556571 ACOT2P49753 483 aa12.81□□□□□ -0.36
ACTN1-221ENST00000556571 ZNF131P52739 623 aa12.81□□□□□ -0.36
ACTN1-221ENST00000556571 TSPY1Q01534 308 aa12.81□□□□□ -0.36
ACTN1-221ENST00000556571 POU5F1Q01860 360 aaKnown RBP12.81□□□□□ -0.36
ACTN1-221ENST00000556571 FAM160A1Q05DH4 1040 aa12.81□□□□□ -0.36
ACTN1-221ENST00000556571 NR1H3Q13133 447 aa12.81□□□□□ -0.36
ACTN1-221ENST00000556571 MTF1Q14872 753 aa12.81□□□□□ -0.36
ACTN1-221ENST00000556571 NFE2Q16621 373 aaPredicted RBP12.81□□□□□ -0.36
ACTN1-221ENST00000556571 USP39Q53GS9 565 aaKnown RBP12.81□□□□□ -0.36
ACTN1-221ENST00000556571 ARL6IP4Q66PJ3 421 aaKnown RBP12.81□□□□□ -0.36
ACTN1-221ENST00000556571 ADALQ6DHV7 355 aa12.81□□□□□ -0.36
ACTN1-221ENST00000556571 SLFN12LQ6IEE8 588 aa12.81□□□□□ -0.36
ACTN1-221ENST00000556571 SLC39A4Q6P5W5 647 aa12.81□□□□□ -0.36
ACTN1-221ENST00000556571 UNQ6494/PRO21346Q6UXR6 183 aa12.81□□□□□ -0.36
ACTN1-221ENST00000556571 GPBP1Q86WP2 473 aa12.81□□□□□ -0.36
ACTN1-221ENST00000556571 RIN3Q8TB24 985 aa12.81□□□□□ -0.36
ACTN1-221ENST00000556571 OSCP1Q8WVF1 389 aa12.81□□□□□ -0.36
ACTN1-221ENST00000556571 CD101Q93033 1021 aa12.81□□□□□ -0.36
ACTN1-221ENST00000556571 DUS2Q9NX74 493 aaKnown RBP12.81□□□□□ -0.36
ACTN1-221ENST00000556571 RALYQ9UKM9 306 aaKnown RBP12.81□□□□□ -0.36
ACTN1-221ENST00000556571 MAGED2Q9UNF1 606 aaPredicted RBP12.81□□□□□ -0.36
ACTN1-221ENST00000556571 C1QTNF9BB2RNN3 333 aa12.8□□□□□ -0.36
ACTN1-221ENST00000556571 KHNYNO15037 678 aaKnown RBP12.8□□□□□ -0.36
ACTN1-221ENST00000556571 C1QTNF9P0C862 333 aa12.8□□□□□ -0.36
ACTN1-221ENST00000556571 CEACAM1P13688 526 aa12.8□□□□□ -0.36
ACTN1-221ENST00000556571 IFNAR2P48551 515 aa12.8□□□□□ -0.36
ACTN1-221ENST00000556571 DGKEP52429 567 aa12.8□□□□□ -0.36
ACTN1-221ENST00000556571 RPL10AP62906 217 aaKnown RBP12.8□□□□□ -0.36
ACTN1-221ENST00000556571 GTF2BQ00403 316 aa12.8□□□□□ -0.36
ACTN1-221ENST00000556571 ZNF252P-AS1Q0IIN9 211 aa12.8□□□□□ -0.36
ACTN1-221ENST00000556571 PSMD2Q13200 908 aa12.8□□□□□ -0.36
ACTN1-221ENST00000556571 SV2CQ496J9 727 aa12.8□□□□□ -0.36
ACTN1-221ENST00000556571 SH3PXD2AQ5TCZ1 1133 aa12.8□□□□□ -0.36
ACTN1-221ENST00000556571 NAIF1Q69YI7 327 aaPredicted RBP12.8□□□□□ -0.36
ACTN1-221ENST00000556571 KDF1Q8NAX2 398 aaPredicted RBP12.8□□□□□ -0.36
ACTN1-221ENST00000556571 TSTD1Q8NFU3 115 aa12.8□□□□□ -0.36
ACTN1-221ENST00000556571 ATP2A3Q93084 1043 aa12.8□□□□□ -0.36
ACTN1-221ENST00000556571 TRMT2BQ96GJ1 504 aaKnown RBP12.8□□□□□ -0.36
ACTN1-221ENST00000556571 MYRFLQ96LU7 910 aa12.8□□□□□ -0.36
ACTN1-221ENST00000556571 AK8Q96MA6 479 aa12.8□□□□□ -0.36
ACTN1-221ENST00000556571 PI4K2AQ9BTU6 479 aa12.8□□□□□ -0.36
ACTN1-221ENST00000556571 TMEM206Q9H813 350 aa12.8□□□□□ -0.36
ACTN1-221ENST00000556571 ABCB6Q9NP58 842 aa12.8□□□□□ -0.36
ACTN1-221ENST00000556571 TMLHEQ9NVH6 421 aa12.8□□□□□ -0.36
ACTN1-221ENST00000556571 AGO2Q9UKV8 859 aaKnown RBP12.8□□□□□ -0.36
ACTN1-221ENST00000556571 ZMIZ1Q9ULJ6 1067 aa12.8□□□□□ -0.36
ACTN1-221ENST00000556571 STYXL1Q9Y6J8 313 aa12.8□□□□□ -0.36
ACTN1-221ENST00000556571 FASNP49327 2511 aaKnown RBP12.79□□□□□ -0.36
ACTN1-221ENST00000556571 TRAV19A0A0A6YYK7 116 aa12.79□□□□□ -0.36
ACTN1-221ENST00000556571 LNP1A1A4G5 178 aa12.79□□□□□ -0.36
ACTN1-221ENST00000556571 ANKRD63C9JTQ0 380 aa12.79□□□□□ -0.36
ACTN1-221ENST00000556571 GIPC1O14908 333 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms